RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 GMPR2Q9P2T1 348 aaKnown RBP14.03□□□□□ -0.16
DDB1-218ENST00000540784 ABCD2Q9UBJ2 740 aa14.03□□□□□ -0.16
DDB1-218ENST00000540784 PRDM4Q9UKN5 801 aa14.03□□□□□ -0.16
DDB1-218ENST00000540784 SHANK1Q9Y566 2161 aa14.02□□□□□ -0.16
DDB1-218ENST00000540784 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.02□□□□□ -0.17
DDB1-218ENST00000540784 C7orf72A4D263 438 aa14.02□□□□□ -0.17
DDB1-218ENST00000540784 SHISA8B8ZZ34 492 aa14.02□□□□□ -0.17
DDB1-218ENST00000540784 UBOX5O94941 541 aa14.02□□□□□ -0.17
DDB1-218ENST00000540784 STSP08842 583 aa14.02□□□□□ -0.17
DDB1-218ENST00000540784 GKN3PP0CG01 181 aa14.02□□□□□ -0.17
DDB1-218ENST00000540784 PEPDP12955 493 aa14.02□□□□□ -0.17
DDB1-218ENST00000540784 GP1BBP13224 206 aa14.02□□□□□ -0.17
DDB1-218ENST00000540784 CPN1P15169 458 aa14.02□□□□□ -0.17
DDB1-218ENST00000540784 ZNF17P17021 662 aa14.02□□□□□ -0.17
DDB1-218ENST00000540784 PRKCAP17252 672 aa14.02□□□□□ -0.17
DDB1-218ENST00000540784 ADH6P28332 368 aa14.02□□□□□ -0.17
DDB1-218ENST00000540784 KDELR2P33947 212 aa14.02□□□□□ -0.17
DDB1-218ENST00000540784 IDH2P48735 452 aaKnown RBP14.02□□□□□ -0.17
DDB1-218ENST00000540784 SESN3P58005 492 aa14.02□□□□□ -0.17
DDB1-218ENST00000540784 PLAURQ03405 335 aa14.02□□□□□ -0.17
DDB1-218ENST00000540784 CRYZQ08257 329 aaKnown RBP14.02□□□□□ -0.17
DDB1-218ENST00000540784 DMTNQ08495 405 aa14.02□□□□□ -0.17
DDB1-218ENST00000540784 BCL2A1Q16548 175 aa14.02□□□□□ -0.17
DDB1-218ENST00000540784 C3AR1Q16581 482 aa14.02□□□□□ -0.17
DDB1-218ENST00000540784 SAMD4BQ5PRF9 694 aaKnown RBP14.02□□□□□ -0.17
DDB1-218ENST00000540784 ZNF585AQ6P3V2 769 aa14.02□□□□□ -0.17
DDB1-218ENST00000540784 RINLQ6ZS11 566 aa14.02□□□□□ -0.17
DDB1-218ENST00000540784 PM20D2Q8IYS1 436 aa14.02□□□□□ -0.17
DDB1-218ENST00000540784 SMYD1Q8NB12 490 aa14.02□□□□□ -0.17
DDB1-218ENST00000540784 RBM15BQ8NDT2 890 aaKnown RBP14.02□□□□□ -0.17
DDB1-218ENST00000540784 RASSF5Q8WWW0 418 aa14.02□□□□□ -0.17
DDB1-218ENST00000540784 ST8SIA1Q92185 356 aa14.02□□□□□ -0.17
DDB1-218ENST00000540784 SLC35B4Q969S0 331 aa14.02□□□□□ -0.17
DDB1-218ENST00000540784 MRGPRX4Q96LA9 322 aa14.02□□□□□ -0.17
DDB1-218ENST00000540784 RNF145Q96MT1 663 aa14.02□□□□□ -0.17
DDB1-218ENST00000540784 RSPO3Q9BXY4 272 aaPredicted RBP14.02□□□□□ -0.17
DDB1-218ENST00000540784 PNPLA3Q9NST1 481 aa14.02□□□□□ -0.17
DDB1-218ENST00000540784 CAMK2AQ9UQM7 478 aa14.02□□□□□ -0.17
DDB1-218ENST00000540784 CHST2Q9Y4C5 530 aa14.02□□□□□ -0.17
DDB1-218ENST00000540784 AP4B1Q9Y6B7 739 aa14.02□□□□□ -0.17
DDB1-218ENST00000540784 A0A1B0GUH1 482 aa14.01□□□□□ -0.17
DDB1-218ENST00000540784 AHRRA9YTQ3 701 aa14.01□□□□□ -0.17
DDB1-218ENST00000540784 H3BML4 177 aa14.01□□□□□ -0.17
DDB1-218ENST00000540784 AP3D1O14617 1153 aa14.01□□□□□ -0.17
DDB1-218ENST00000540784 GMNNO75496 209 aa14.01□□□□□ -0.17
DDB1-218ENST00000540784 C8BP07358 591 aa14.01□□□□□ -0.17
DDB1-218ENST00000540784 POU3F2P20265 443 aaPredicted RBP14.01□□□□□ -0.17
DDB1-218ENST00000540784 CPOXP36551 454 aa14.01□□□□□ -0.17
DDB1-218ENST00000540784 ACAA2P42765 397 aaKnown RBP14.01□□□□□ -0.17
DDB1-218ENST00000540784 KCNJ5P48544 419 aa14.01□□□□□ -0.17
DDB1-218ENST00000540784 COPZ1P61923 177 aa14.01□□□□□ -0.17
DDB1-218ENST00000540784 SRYQ05066 204 aa14.01□□□□□ -0.17
DDB1-218ENST00000540784 EPS8Q12929 822 aa14.01□□□□□ -0.17
DDB1-218ENST00000540784 SF3B4Q15427 424 aaKnown RBP eCLIP14.01□□□□□ -0.173e-7■■■□□ 15.3
DDB1-218ENST00000540784 DUSP7Q16829 419 aa14.01□□□□□ -0.17
DDB1-218ENST00000540784 SLC25A53Q5H9E4 307 aa14.01□□□□□ -0.17
DDB1-218ENST00000540784 RNF148Q8N7C7 305 aa14.01□□□□□ -0.17
DDB1-218ENST00000540784 POC1BQ8TC44 478 aa14.01□□□□□ -0.17
DDB1-218ENST00000540784 FIG4Q92562 907 aa14.01□□□□□ -0.17
DDB1-218ENST00000540784 TAMM41Q96BW9 452 aa14.01□□□□□ -0.17
DDB1-218ENST00000540784 ZNF524Q96C55 264 aa14.01□□□□□ -0.17
DDB1-218ENST00000540784 WDYHV1Q96HA8 205 aa14.01□□□□□ -0.17
DDB1-218ENST00000540784 C1orf21Q9H246 121 aa14.01□□□□□ -0.17
DDB1-218ENST00000540784 EVA1AQ9H8M9 152 aa14.01□□□□□ -0.17
DDB1-218ENST00000540784 SH3BGRL2Q9UJC5 107 aa14.01□□□□□ -0.17
DDB1-218ENST00000540784 PACSIN3Q9UKS6 424 aa14.01□□□□□ -0.17
DDB1-218ENST00000540784 NCKAP5O14513 1909 aa14□□□□□ -0.17
DDB1-218ENST00000540784 FAAHO00519 579 aa14□□□□□ -0.17
DDB1-218ENST00000540784 CXCR6O00574 342 aa14□□□□□ -0.17
DDB1-218ENST00000540784 ADAM11O75078 769 aa14□□□□□ -0.17
DDB1-218ENST00000540784 LGI1O95970 557 aa14□□□□□ -0.17
DDB1-218ENST00000540784 OPN1SWP03999 348 aa14□□□□□ -0.17
DDB1-218ENST00000540784 HOXD4P09016 255 aaPredicted RBP14□□□□□ -0.17
DDB1-218ENST00000540784 GABRA1P14867 456 aa14□□□□□ -0.17
DDB1-218ENST00000540784 PSMA4P25789 261 aaKnown RBP14□□□□□ -0.17
DDB1-218ENST00000540784 HTR1EP28566 365 aa14□□□□□ -0.17
DDB1-218ENST00000540784 CA7P43166 264 aa14□□□□□ -0.17
DDB1-218ENST00000540784 LHX2P50458 406 aa14□□□□□ -0.17
DDB1-218ENST00000540784 RAC1P63000 192 aa14□□□□□ -0.17
DDB1-218ENST00000540784 KCNC4Q03721 635 aa14□□□□□ -0.17
DDB1-218ENST00000540784 MERTKQ12866 999 aa14□□□□□ -0.17
DDB1-218ENST00000540784 FOXF1Q12946 379 aa14□□□□□ -0.17
DDB1-218ENST00000540784 SPATS1Q496A3 300 aa14□□□□□ -0.17
DDB1-218ENST00000540784 GLIPR1L2Q4G1C9 344 aa14□□□□□ -0.17
DDB1-218ENST00000540784 EMC4Q5J8M3 183 aa14□□□□□ -0.17
DDB1-218ENST00000540784 DCST1Q5T197 706 aa14□□□□□ -0.17
DDB1-218ENST00000540784 C1QL3Q5VWW1 255 aa14□□□□□ -0.17
DDB1-218ENST00000540784 CD163Q86VB7 1156 aa14□□□□□ -0.17
DDB1-218ENST00000540784 LILRA2Q8N149 483 aa14□□□□□ -0.17
DDB1-218ENST00000540784 RELTQ969Z4 430 aa14□□□□□ -0.17
DDB1-218ENST00000540784 NPAS1Q99742 590 aa14□□□□□ -0.17
DDB1-218ENST00000540784 PRDM14Q9GZV8 571 aa14□□□□□ -0.17
DDB1-218ENST00000540784 TP63Q9H3D4 680 aaPredicted RBP14□□□□□ -0.17
DDB1-218ENST00000540784 SERINC1Q9NRX5 453 aa14□□□□□ -0.17
DDB1-218ENST00000540784 TAS2R1Q9NYW7 299 aa14□□□□□ -0.17
DDB1-218ENST00000540784 CD300AQ9UGN4 299 aa14□□□□□ -0.17
DDB1-218ENST00000540784 TINAGQ9UJW2 476 aa14□□□□□ -0.17
DDB1-218ENST00000540784 SPENQ96T58 3664 aaKnown RBP13.99□□□□□ -0.17
DDB1-218ENST00000540784 FIGNL2A6NMB9 653 aa13.99□□□□□ -0.17
DDB1-218ENST00000540784 ETV2O00321 342 aaPredicted RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms