RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 LINC00862A6NCI5 91 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 MID1O15344 667 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 KCNJ13O60928 360 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 UBL3O95164 117 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 DBIP07108 87 aaKnown RBP11.39□□□□□ -0.59
NPC1-202ENST00000540608 MRPL3P09001 348 aaKnown RBP11.39□□□□□ -0.59
NPC1-202ENST00000540608 GKN3PP0CG01 181 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 IL9P15248 144 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 POU3F3P20264 500 aaPredicted RBP11.39□□□□□ -0.59
NPC1-202ENST00000540608 RAB3BP20337 219 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 RPS4Y1P22090 263 aaKnown RBP11.39□□□□□ -0.59
NPC1-202ENST00000540608 MMP15P51511 669 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 AP2S1P53680 142 aaPredicted RBP11.39□□□□□ -0.59
NPC1-202ENST00000540608 SLC16A1P53985 500 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 OR12D2P58182 307 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 PITPNAQ00169 270 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 HSD17B12Q53GQ0 312 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 CCNJQ5T5M9 372 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 DMKNQ6E0U4 476 aaPredicted RBP11.39□□□□□ -0.59
NPC1-202ENST00000540608 THSD4Q6ZMP0 1018 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 SIAH3Q8IW03 269 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 TIGD4Q8IY51 512 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 MS4A15Q8N5U1 240 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 OR4K14Q8NGD5 310 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 ADAMTS14Q8WXS8 1223 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 ZNF350Q9GZX5 532 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 THAP10Q9P2Z0 257 aaPredicted RBP11.39□□□□□ -0.59
NPC1-202ENST00000540608 SERGEFQ9UGK8 458 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 SLC35A3Q9Y2D2 325 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 TRANK1O15050 2925 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 DNAH14Q0VDD8 3507 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 TRAV1-2A0A0B4J238 106 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 SHOXO15266 292 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 CEACAM5P06731 702 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 TPOP07202 933 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 ZNF888P0CJ79 500 aaPredicted RBP11.39□□□□□ -0.59
NPC1-202ENST00000540608 SLC2A5P22732 501 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 GIFP27352 417 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 NDUFS1P28331 727 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 ACVR1BP36896 505 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 RAG2P55895 527 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 TNFRSF17Q02223 184 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 DBPQ10586 325 aaPredicted RBP11.39□□□□□ -0.59
NPC1-202ENST00000540608 TMEM240Q5SV17 173 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 VN1R4Q7Z5H5 301 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 LUZP2Q86TE4 346 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 LSRQ86X29 649 aaPredicted RBP11.39□□□□□ -0.59
NPC1-202ENST00000540608 ZNF619Q8N2I2 560 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 BMPERQ8N8U9 685 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 ZNF680Q8NEM1 530 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 SLC2A12Q8TD20 617 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 SMPDL3BQ92485 455 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 GHSRQ92847 366 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 BPIFA2Q96DR5 249 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 CACNG6Q9BXT2 260 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 KLHL1Q9NR64 748 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 HAO2Q9NYQ3 351 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 KCMF1Q9P0J7 381 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 ABRACLQ9P1F3 81 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 SIGLEC7Q9Y286 467 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 TMEM5Q9Y2B1 443 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 RNF215Q9Y6U7 377 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 TBC1D3EA0A087X179 549 aa11.38□□□□□ -0.59
NPC1-202ENST00000540608 CDHR4A6H8M9 788 aa11.38□□□□□ -0.59
NPC1-202ENST00000540608 HYAL3O43820 417 aaPredicted RBP11.38□□□□□ -0.59
NPC1-202ENST00000540608 RAF1P04049 648 aa11.38□□□□□ -0.59
NPC1-202ENST00000540608 CD3GP09693 182 aa11.38□□□□□ -0.59
NPC1-202ENST00000540608 FGL2Q14314 439 aa11.38□□□□□ -0.59
NPC1-202ENST00000540608 RPTNQ6XPR3 784 aa11.38□□□□□ -0.59
NPC1-202ENST00000540608 PAQR7Q86WK9 346 aa11.38□□□□□ -0.59
NPC1-202ENST00000540608 OR11H4Q8NGC9 324 aa11.38□□□□□ -0.59
NPC1-202ENST00000540608 OR13C2Q8NGS9 318 aa11.38□□□□□ -0.59
NPC1-202ENST00000540608 HAVCR2Q8TDQ0 301 aa11.38□□□□□ -0.59
NPC1-202ENST00000540608 FGF13Q92913 245 aa11.38□□□□□ -0.59
NPC1-202ENST00000540608 SMARCD2Q92925 531 aa11.38□□□□□ -0.59
NPC1-202ENST00000540608 ZCCHC4Q9H5U6 513 aa11.38□□□□□ -0.59
NPC1-202ENST00000540608 GOLGA4Q13439 2230 aaKnown RBP11.38□□□□□ -0.59
NPC1-202ENST00000540608 RANBP2P49792 3224 aaKnown RBP11.38□□□□□ -0.59
NPC1-202ENST00000540608 RIIAD1A6NNX1 92 aa11.38□□□□□ -0.59
NPC1-202ENST00000540608 FMO6PO60774 539 aa11.38□□□□□ -0.59
NPC1-202ENST00000540608 PTP4A3O75365 173 aa11.38□□□□□ -0.59
NPC1-202ENST00000540608 STX11O75558 287 aa11.38□□□□□ -0.59
NPC1-202ENST00000540608 LAMP2P13473 410 aa11.38□□□□□ -0.59
NPC1-202ENST00000540608 NID1P14543 1247 aa11.38□□□□□ -0.59
NPC1-202ENST00000540608 CXCL3P19876 107 aa11.38□□□□□ -0.59
NPC1-202ENST00000540608 M6PRP20645 277 aa11.38□□□□□ -0.59
NPC1-202ENST00000540608 NOS3P29474 1203 aa11.38□□□□□ -0.59
NPC1-202ENST00000540608 BMP8BP34820 402 aa11.38□□□□□ -0.59
NPC1-202ENST00000540608 RGS1Q08116 209 aa11.38□□□□□ -0.59
NPC1-202ENST00000540608 COL28A1Q2UY09 1125 aa11.38□□□□□ -0.59
NPC1-202ENST00000540608 MRPL2Q5T653 305 aaKnown RBP11.38□□□□□ -0.59
NPC1-202ENST00000540608 BMP8AQ7Z5Y6 402 aa11.38□□□□□ -0.59
NPC1-202ENST00000540608 OR4C6Q8NH72 309 aa11.38□□□□□ -0.59
NPC1-202ENST00000540608 NT5CQ8TCD5 201 aa11.38□□□□□ -0.59
NPC1-202ENST00000540608 SORCS2Q96PQ0 1159 aa11.38□□□□□ -0.59
NPC1-202ENST00000540608 C7orf50Q9BRJ6 194 aaKnown RBP11.38□□□□□ -0.59
NPC1-202ENST00000540608 HEXA-AS1Q9H8Q6 139 aa11.38□□□□□ -0.59
NPC1-202ENST00000540608 SLC17A4Q9Y2C5 497 aa11.38□□□□□ -0.59
NPC1-202ENST00000540608 MED31Q9Y3C7 131 aa11.38□□□□□ -0.59
NPC1-202ENST00000540608 AUP1Q9Y679 476 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms