RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 Q6ZSR9 355 aa11.05□□□□□ -0.64
COPS7A-211ENST00000540408 GALNT5Q7Z7M9 940 aa11.05□□□□□ -0.64
COPS7A-211ENST00000540408 ATG4DQ86TL0 474 aaPredicted RBP11.05□□□□□ -0.64
COPS7A-211ENST00000540408 FBXL14Q8N1E6 418 aa11.05□□□□□ -0.64
COPS7A-211ENST00000540408 TMCO5AQ8N6Q1 288 aa11.05□□□□□ -0.64
COPS7A-211ENST00000540408 ZNF614Q8N883 585 aa11.05□□□□□ -0.64
COPS7A-211ENST00000540408 TOR1AIP2Q8NFQ8 470 aa11.05□□□□□ -0.64
COPS7A-211ENST00000540408 CLHC1Q8NHS4 586 aa11.05□□□□□ -0.64
COPS7A-211ENST00000540408 RFWD2Q8NHY2 731 aa11.05□□□□□ -0.64
COPS7A-211ENST00000540408 GPR119Q8TDV5 335 aa11.05□□□□□ -0.64
COPS7A-211ENST00000540408 CDS1Q92903 461 aa11.05□□□□□ -0.64
COPS7A-211ENST00000540408 FAM120BQ96EK7 910 aaKnown RBP11.05□□□□□ -0.64
COPS7A-211ENST00000540408 OTUB1Q96FW1 271 aaPredicted RBP11.05□□□□□ -0.64
COPS7A-211ENST00000540408 PSD2Q9BQI7 771 aa11.05□□□□□ -0.64
COPS7A-211ENST00000540408 CACNG6Q9BXT2 260 aa11.05□□□□□ -0.64
COPS7A-211ENST00000540408 AMBRA1Q9C0C7 1298 aa11.05□□□□□ -0.64
COPS7A-211ENST00000540408 CBLN4Q9NTU7 201 aa11.05□□□□□ -0.64
COPS7A-211ENST00000540408 BAIAP2L1Q9UHR4 511 aa11.05□□□□□ -0.64
COPS7A-211ENST00000540408 PRSS50Q9UI38 385 aa11.05□□□□□ -0.64
COPS7A-211ENST00000540408 ICAM5Q9UMF0 924 aa11.05□□□□□ -0.64
COPS7A-211ENST00000540408 FIS1Q9Y3D6 152 aa11.05□□□□□ -0.64
COPS7A-211ENST00000540408 ABCA1O95477 2261 aa11.05□□□□□ -0.64
COPS7A-211ENST00000540408 SONP18583 2426 aaKnown RBP11.04□□□□□ -0.64
COPS7A-211ENST00000540408 IGHV4-30-2A0A087WSY4 118 aa11.04□□□□□ -0.64
COPS7A-211ENST00000540408 A0A1W2PNR3 127 aa11.04□□□□□ -0.64
COPS7A-211ENST00000540408 CIB4A0PJX0 185 aa11.04□□□□□ -0.64
COPS7A-211ENST00000540408 ZNF724A8MTY0 619 aa11.04□□□□□ -0.64
COPS7A-211ENST00000540408 TMEM114B3SHH9 223 aa11.04□□□□□ -0.64
COPS7A-211ENST00000540408 C9JVG2 144 aa11.04□□□□□ -0.64
COPS7A-211ENST00000540408 RIPK2O43353 540 aa11.04□□□□□ -0.64
COPS7A-211ENST00000540408 GPRIN2O60269 458 aa11.04□□□□□ -0.64
COPS7A-211ENST00000540408 EIF4E2O60573 245 aaKnown RBP11.04□□□□□ -0.64
COPS7A-211ENST00000540408 CYTIPO60759 359 aa11.04□□□□□ -0.64
COPS7A-211ENST00000540408 F12P00748 615 aaPredicted RBP11.04□□□□□ -0.64
COPS7A-211ENST00000540408 SLC25A16P16260 332 aa11.04□□□□□ -0.64
COPS7A-211ENST00000540408 PRKCAP17252 672 aa11.04□□□□□ -0.64
COPS7A-211ENST00000540408 PTAFRP25105 342 aa11.04□□□□□ -0.64
COPS7A-211ENST00000540408 ECHS1P30084 290 aa11.04□□□□□ -0.64
COPS7A-211ENST00000540408 TTKP33981 857 aa11.04□□□□□ -0.64
COPS7A-211ENST00000540408 HPCAL1P37235 193 aa11.04□□□□□ -0.64
COPS7A-211ENST00000540408 CCR4P51679 360 aa11.04□□□□□ -0.64
COPS7A-211ENST00000540408 ATP12AP54707 1039 aa11.04□□□□□ -0.64
COPS7A-211ENST00000540408 RPL38P63173 70 aaKnown RBP11.04□□□□□ -0.64
COPS7A-211ENST00000540408 LOXL1Q08397 574 aaPredicted RBP11.04□□□□□ -0.64
COPS7A-211ENST00000540408 TP53BP2Q13625 1128 aa11.04□□□□□ -0.64
COPS7A-211ENST00000540408 PDE7AQ13946 482 aa11.04□□□□□ -0.64
COPS7A-211ENST00000540408 TOMM34Q15785 309 aaPredicted RBP11.04□□□□□ -0.64
COPS7A-211ENST00000540408 TMEM249Q2WGJ8 235 aa11.04□□□□□ -0.64
COPS7A-211ENST00000540408 SPDYE7PQ495Y7 208 aa11.04□□□□□ -0.64
COPS7A-211ENST00000540408 GALNTL6Q49A17 601 aa11.04□□□□□ -0.64
COPS7A-211ENST00000540408 RFTN2Q52LD8 501 aaPredicted RBP11.04□□□□□ -0.64
COPS7A-211ENST00000540408 DCST2Q5T1A1 773 aa11.04□□□□□ -0.64
COPS7A-211ENST00000540408 CYB5R2Q6BCY4 276 aa11.04□□□□□ -0.64
COPS7A-211ENST00000540408 CDC73Q6P1J9 531 aa11.04□□□□□ -0.64
COPS7A-211ENST00000540408 SLC22A25Q6T423 547 aa11.04□□□□□ -0.64
COPS7A-211ENST00000540408 UBE2J2Q8N2K1 259 aa11.04□□□□□ -0.64
COPS7A-211ENST00000540408 C17orf53Q8N3J3 647 aaPredicted RBP11.04□□□□□ -0.64
COPS7A-211ENST00000540408 NATD1Q8N6N6 113 aa11.04□□□□□ -0.64
COPS7A-211ENST00000540408 OR10H5Q8NGA6 315 aa11.04□□□□□ -0.64
COPS7A-211ENST00000540408 OR5W2Q8NH69 310 aa11.04□□□□□ -0.64
COPS7A-211ENST00000540408 ZNF775Q96BV0 537 aaPredicted RBP11.04□□□□□ -0.64
COPS7A-211ENST00000540408 OR5B2Q96R09 309 aa11.04□□□□□ -0.64
COPS7A-211ENST00000540408 DHRS9Q9BPW9 319 aa11.04□□□□□ -0.64
COPS7A-211ENST00000540408 KLHDC3Q9BQ90 382 aa11.04□□□□□ -0.64
COPS7A-211ENST00000540408 ACTRT3Q9BYD9 372 aa11.04□□□□□ -0.64
COPS7A-211ENST00000540408 SHARPINQ9H0F6 387 aa11.04□□□□□ -0.64
COPS7A-211ENST00000540408 CXorf36Q9H7Y0 433 aa11.04□□□□□ -0.64
COPS7A-211ENST00000540408 COQ10BQ9H8M1 238 aa11.04□□□□□ -0.64
COPS7A-211ENST00000540408 OXSMQ9NWU1 459 aa11.04□□□□□ -0.64
COPS7A-211ENST00000540408 TMEM160Q9NX00 188 aa11.04□□□□□ -0.64
COPS7A-211ENST00000540408 EMC3Q9P0I2 261 aa11.04□□□□□ -0.64
COPS7A-211ENST00000540408 DTNAQ9Y4J8 743 aa11.04□□□□□ -0.64
COPS7A-211ENST00000540408 CR1P17927 2039 aa11.03□□□□□ -0.64
COPS7A-211ENST00000540408 OR5H1A6NKK0 313 aa11.03□□□□□ -0.64
COPS7A-211ENST00000540408 ELOA3DA6NLF2 546 aaPredicted RBP11.03□□□□□ -0.64
COPS7A-211ENST00000540408 CCT8L1PA6NM43 557 aa11.03□□□□□ -0.64
COPS7A-211ENST00000540408 AZIN1O14977 448 aa11.03□□□□□ -0.64
COPS7A-211ENST00000540408 ZNF264O43296 627 aa11.03□□□□□ -0.64
COPS7A-211ENST00000540408 PGM3O95394 542 aa11.03□□□□□ -0.64
COPS7A-211ENST00000540408 PROCP04070 461 aa11.03□□□□□ -0.64
COPS7A-211ENST00000540408 LINC00032P0C843 101 aa11.03□□□□□ -0.64
COPS7A-211ENST00000540408 DHRS4L1P0CG22 281 aa11.03□□□□□ -0.64
COPS7A-211ENST00000540408 CPA3P15088 417 aa11.03□□□□□ -0.64
COPS7A-211ENST00000540408 EFNA1P20827 205 aaPredicted RBP11.03□□□□□ -0.64
COPS7A-211ENST00000540408 PTNP21246 168 aa11.03□□□□□ -0.64
COPS7A-211ENST00000540408 IGHV1-2P23083 117 aa11.03□□□□□ -0.64
COPS7A-211ENST00000540408 MAPK1P28482 360 aa11.03□□□□□ -0.64
COPS7A-211ENST00000540408 CCT3P49368 545 aaKnown RBP11.03□□□□□ -0.64
COPS7A-211ENST00000540408 FABP6P51161 128 aa11.03□□□□□ -0.64
COPS7A-211ENST00000540408 CASP9P55211 416 aa11.03□□□□□ -0.64
COPS7A-211ENST00000540408 CSNK2A1P68400 391 aaPredicted RBP11.03□□□□□ -0.64
COPS7A-211ENST00000540408 IRX1P78414 480 aaPredicted RBP11.03□□□□□ -0.64
COPS7A-211ENST00000540408 VLDLRP98155 873 aa11.03□□□□□ -0.64
COPS7A-211ENST00000540408 LSM12Q3MHD2 195 aaKnown RBP11.03□□□□□ -0.64
COPS7A-211ENST00000540408 ELOA3BQ3SY89 546 aa11.03□□□□□ -0.64
COPS7A-211ENST00000540408 SLC25A53Q5H9E4 307 aa11.03□□□□□ -0.64
COPS7A-211ENST00000540408 EXOSC6Q5RKV6 272 aaKnown RBP11.03□□□□□ -0.64
COPS7A-211ENST00000540408 LIPMQ5VYY2 423 aa11.03□□□□□ -0.64
COPS7A-211ENST00000540408 C3orf33Q6P1S2 294 aa11.03□□□□□ -0.64
COPS7A-211ENST00000540408 SEZ6L2Q6UXD5 910 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms