RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 CDYLQ9Y232 598 aa11.75□□□□□ -0.53
DDX55-206ENST00000539934 IGSF10Q6WRI0 2623 aa11.74□□□□□ -0.53
DDX55-206ENST00000539934 PIKFYVEQ9Y2I7 2098 aa11.74□□□□□ -0.53
DDX55-206ENST00000539934 ATP6AP2A0A1C7CYW4 349 aa11.74□□□□□ -0.53
DDX55-206ENST00000539934 TBC1D3FA6NER0 549 aaPredicted RBP11.74□□□□□ -0.53
DDX55-206ENST00000539934 TMEM233B4DJY2 109 aa11.74□□□□□ -0.53
DDX55-206ENST00000539934 SUPT3HB4E1H0 165 aa11.74□□□□□ -0.53
DDX55-206ENST00000539934 GAPDHSO14556 408 aaPredicted RBP11.74□□□□□ -0.53
DDX55-206ENST00000539934 BCAT2O15382 392 aaPredicted RBP11.74□□□□□ -0.53
DDX55-206ENST00000539934 GRID2O43424 1007 aa11.74□□□□□ -0.53
DDX55-206ENST00000539934 OR10H3O60404 316 aa11.74□□□□□ -0.53
DDX55-206ENST00000539934 MRPS14O60783 128 aaKnown RBP11.74□□□□□ -0.53
DDX55-206ENST00000539934 ZIC2O95409 532 aaPredicted RBP11.74□□□□□ -0.53
DDX55-206ENST00000539934 PNPP00491 289 aa11.74□□□□□ -0.53
DDX55-206ENST00000539934 GCGRP47871 477 aa11.74□□□□□ -0.53
DDX55-206ENST00000539934 IL2P60568 153 aa11.74□□□□□ -0.53
DDX55-206ENST00000539934 POLR2LP62875 67 aaKnown RBP11.74□□□□□ -0.53
DDX55-206ENST00000539934 TSNQ15631 228 aaKnown RBP11.74□□□□□ -0.53
DDX55-206ENST00000539934 SNAPC1Q16533 368 aa11.74□□□□□ -0.53
DDX55-206ENST00000539934 MEP1AQ16819 746 aa11.74□□□□□ -0.53
DDX55-206ENST00000539934 LRRC73Q5JTD7 316 aa11.74□□□□□ -0.53
DDX55-206ENST00000539934 ZNF678Q5SXM1 525 aa11.74□□□□□ -0.53
DDX55-206ENST00000539934 DHRS7BQ6IAN0 325 aaPredicted RBP11.74□□□□□ -0.53
DDX55-206ENST00000539934 NDUFAF7Q7L592 441 aa11.74□□□□□ -0.53
DDX55-206ENST00000539934 CUZD1Q86UP6 607 aa11.74□□□□□ -0.53
DDX55-206ENST00000539934 SELENOHQ8IZQ5 122 aaKnown RBP11.74□□□□□ -0.53
DDX55-206ENST00000539934 OR2A12Q8NGT7 310 aa11.74□□□□□ -0.53
DDX55-206ENST00000539934 OR2V1Q8NHB1 315 aa11.74□□□□□ -0.53
DDX55-206ENST00000539934 CD200R1Q8TD46 325 aa11.74□□□□□ -0.53
DDX55-206ENST00000539934 VOPP1Q96AW1 172 aa11.74□□□□□ -0.53
DDX55-206ENST00000539934 NEDD4LQ96PU5 975 aa11.74□□□□□ -0.53
DDX55-206ENST00000539934 SLC38A3Q99624 504 aa11.74□□□□□ -0.53
DDX55-206ENST00000539934 SEC14L3Q9UDX4 400 aa11.74□□□□□ -0.53
DDX55-206ENST00000539934 FBXL2Q9UKC9 423 aa11.74□□□□□ -0.53
DDX55-206ENST00000539934 ASCC3Q8N3C0 2202 aaKnown RBP11.74□□□□□ -0.53
DDX55-206ENST00000539934 NPEPPSL1A6NEC2 478 aa11.74□□□□□ -0.53
DDX55-206ENST00000539934 C4orf47A7E2U8 309 aa11.74□□□□□ -0.53
DDX55-206ENST00000539934 H0Y8G0 127 aa11.74□□□□□ -0.53
DDX55-206ENST00000539934 PDCD5O14737 125 aa11.74□□□□□ -0.53
DDX55-206ENST00000539934 CRYBA1P05813 215 aa11.74□□□□□ -0.53
DDX55-206ENST00000539934 TUBG1P23258 451 aa11.74□□□□□ -0.53
DDX55-206ENST00000539934 TGM4P49221 684 aa11.74□□□□□ -0.53
DDX55-206ENST00000539934 AP3S2P59780 193 aa11.74□□□□□ -0.53
DDX55-206ENST00000539934 MAD2L1Q13257 205 aaPredicted RBP11.74□□□□□ -0.53
DDX55-206ENST00000539934 ZNF630Q2M218 657 aaPredicted RBP11.74□□□□□ -0.53
DDX55-206ENST00000539934 MPEG1Q2M385 716 aa11.74□□□□□ -0.53
DDX55-206ENST00000539934 EML3Q32P44 896 aa11.74□□□□□ -0.53
DDX55-206ENST00000539934 C2orf76Q3KRA6 126 aa11.74□□□□□ -0.53
DDX55-206ENST00000539934 RBM48Q5RL73 367 aaKnown RBP11.74□□□□□ -0.53
DDX55-206ENST00000539934 LYPLAL1Q5VWZ2 237 aa11.74□□□□□ -0.53
DDX55-206ENST00000539934 GCNT7Q6ZNI0 430 aa11.74□□□□□ -0.53
DDX55-206ENST00000539934 MISPQ8IVT2 679 aa11.74□□□□□ -0.53
DDX55-206ENST00000539934 GHDCQ8N2G8 530 aa11.74□□□□□ -0.53
DDX55-206ENST00000539934 CDYL2Q8N8U2 506 aa11.74□□□□□ -0.53
DDX55-206ENST00000539934 RASGEF1AQ8N9B8 481 aa11.74□□□□□ -0.53
DDX55-206ENST00000539934 OR2D3Q8NGH3 330 aa11.74□□□□□ -0.53
DDX55-206ENST00000539934 OR4K15Q8NH41 348 aa11.74□□□□□ -0.53
DDX55-206ENST00000539934 FAR1Q8WVX9 515 aa11.74□□□□□ -0.53
DDX55-206ENST00000539934 FBXO17Q96EF6 278 aa11.74□□□□□ -0.53
DDX55-206ENST00000539934 ZNF300Q96RE9 604 aaPredicted RBP11.74□□□□□ -0.53
DDX55-206ENST00000539934 CNPPD1Q9BV87 410 aa11.74□□□□□ -0.53
DDX55-206ENST00000539934 NLNQ9BYT8 704 aa11.74□□□□□ -0.53
DDX55-206ENST00000539934 SRRQ9GZT4 340 aa11.74□□□□□ -0.53
DDX55-206ENST00000539934 DCSTAMPQ9H295 470 aa11.74□□□□□ -0.53
DDX55-206ENST00000539934 GSTO2Q9H4Y5 243 aa11.74□□□□□ -0.53
DDX55-206ENST00000539934 TUBG2Q9NRH3 451 aa11.74□□□□□ -0.53
DDX55-206ENST00000539934 ACSS1Q9NUB1 689 aaPredicted RBP11.74□□□□□ -0.53
DDX55-206ENST00000539934 ING4Q9UNL4 249 aa11.74□□□□□ -0.53
DDX55-206ENST00000539934 YLPM1P49750 1951 aaKnown RBP11.73□□□□□ -0.53
DDX55-206ENST00000539934 PGPEP1LA6NFU8 196 aa11.73□□□□□ -0.53
DDX55-206ENST00000539934 CCSO14618 274 aa11.73□□□□□ -0.53
DDX55-206ENST00000539934 KHDRBS3O75525 346 aaKnown RBP11.73□□□□□ -0.53
DDX55-206ENST00000539934 METTL15P1P0C7V9 234 aa11.73□□□□□ -0.53
DDX55-206ENST00000539934 LHCGRP22888 699 aa11.73□□□□□ -0.53
DDX55-206ENST00000539934 ACRV1P26436 265 aa11.73□□□□□ -0.53
DDX55-206ENST00000539934 MPLP40238 635 aa11.73□□□□□ -0.53
DDX55-206ENST00000539934 LUMP51884 338 aaPredicted RBP11.73□□□□□ -0.53
DDX55-206ENST00000539934 TRA2AQ13595 282 aaKnown RBP eCLIP11.73□□□□□ -0.53
DDX55-206ENST00000539934 KRT33BQ14525 404 aa11.73□□□□□ -0.53
DDX55-206ENST00000539934 CCDC157Q569K6 752 aa11.73□□□□□ -0.53
DDX55-206ENST00000539934 TPRG1LQ5T0D9 272 aa11.73□□□□□ -0.53
DDX55-206ENST00000539934 COLCA1Q6ZS62 124 aa11.73□□□□□ -0.53
DDX55-206ENST00000539934 FBXO39Q8N4B4 442 aa11.73□□□□□ -0.53
DDX55-206ENST00000539934 HDDC3Q8N4P3 179 aa11.73□□□□□ -0.53
DDX55-206ENST00000539934 GPR26Q8NDV2 337 aa11.73□□□□□ -0.53
DDX55-206ENST00000539934 ZNF431Q8TF32 576 aaPredicted RBP11.73□□□□□ -0.53
DDX55-206ENST00000539934 EEF1AKMT1Q8WVE0 214 aa11.73□□□□□ -0.53
DDX55-206ENST00000539934 TRMT61AQ96FX7 289 aaKnown RBP11.73□□□□□ -0.53
DDX55-206ENST00000539934 PDLIM5Q96HC4 596 aaKnown RBP11.73□□□□□ -0.53
DDX55-206ENST00000539934 MRGPRX3Q96LB0 322 aa11.73□□□□□ -0.53
DDX55-206ENST00000539934 PRRT1Q99946 306 aa11.73□□□□□ -0.53
DDX55-206ENST00000539934 PCGF1Q9BSM1 259 aa11.73□□□□□ -0.53
DDX55-206ENST00000539934 BOCQ9BWV1 1114 aa11.73□□□□□ -0.53
DDX55-206ENST00000539934 CSTL1Q9H114 145 aa11.73□□□□□ -0.53
DDX55-206ENST00000539934 RNF121Q9H920 327 aa11.73□□□□□ -0.53
DDX55-206ENST00000539934 ZMAT3Q9HA38 289 aaKnown RBP11.73□□□□□ -0.53
DDX55-206ENST00000539934 SMPD3Q9NY59 655 aaPredicted RBP11.73□□□□□ -0.53
DDX55-206ENST00000539934 B4GALT6Q9UBX8 382 aa11.73□□□□□ -0.53
DDX55-206ENST00000539934 C3orf18Q9UK00 162 aa11.73□□□□□ -0.53
DDX55-206ENST00000539934 A6NIZ1 184 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms