RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 TEX47Q8TBZ9 253 aa10.79□□□□□ -0.68
VTN-202ENST00000539746 BRIX1Q8TDN6 353 aaKnown RBP10.79□□□□□ -0.68
VTN-202ENST00000539746 STK35Q8TDR2 534 aa10.79□□□□□ -0.68
VTN-202ENST00000539746 DOK4Q8TEW6 326 aa10.79□□□□□ -0.68
VTN-202ENST00000539746 RNF138Q8WVD3 245 aa10.79□□□□□ -0.68
VTN-202ENST00000539746 TRUB1Q8WWH5 349 aaKnown RBP10.79□□□□□ -0.68
VTN-202ENST00000539746 Q96MT0 163 aa10.79□□□□□ -0.68
VTN-202ENST00000539746 SLC38A2Q96QD8 506 aa10.79□□□□□ -0.68
VTN-202ENST00000539746 PHOX2BQ99453 314 aa10.79□□□□□ -0.68
VTN-202ENST00000539746 FAM173AQ9BQD7 235 aa10.79□□□□□ -0.68
VTN-202ENST00000539746 ING2Q9H160 280 aa10.79□□□□□ -0.68
VTN-202ENST00000539746 NTN4Q9HB63 628 aa10.79□□□□□ -0.68
VTN-202ENST00000539746 TAS2R10Q9NYW0 307 aa10.79□□□□□ -0.68
VTN-202ENST00000539746 SLC7A7Q9UM01 511 aa10.79□□□□□ -0.68
VTN-202ENST00000539746 CARD8Q9Y2G2 431 aa10.79□□□□□ -0.68
VTN-202ENST00000539746 MRPS18CQ9Y3D5 142 aaKnown RBP10.79□□□□□ -0.68
VTN-202ENST00000539746 EP300Q09472 2414 aaPredicted RBP10.79□□□□□ -0.68
VTN-202ENST00000539746 ZFHX2Q9C0A1 2572 aaPredicted RBP10.78□□□□□ -0.68
VTN-202ENST00000539746 A0A087WUJ7 227 aa10.78□□□□□ -0.68
VTN-202ENST00000539746 C7orf72A4D263 438 aa10.78□□□□□ -0.68
VTN-202ENST00000539746 ZNF208O43345 1280 aa10.78□□□□□ -0.68
VTN-202ENST00000539746 DENRO43583 198 aaKnown RBP10.78□□□□□ -0.68
VTN-202ENST00000539746 SCO2O43819 266 aa10.78□□□□□ -0.68
VTN-202ENST00000539746 HCN1O60741 890 aa10.78□□□□□ -0.68
VTN-202ENST00000539746 OR6B1O95007 311 aa10.78□□□□□ -0.68
VTN-202ENST00000539746 ZIC2O95409 532 aaPredicted RBP10.78□□□□□ -0.68
VTN-202ENST00000539746 HMGN1P05114 100 aa10.78□□□□□ -0.68
VTN-202ENST00000539746 OSMP13725 252 aa10.78□□□□□ -0.68
VTN-202ENST00000539746 SOX3P41225 446 aa10.78□□□□□ -0.68
VTN-202ENST00000539746 CASP3P42574 277 aa10.78□□□□□ -0.68
VTN-202ENST00000539746 LIMS1P48059 325 aa10.78□□□□□ -0.68
VTN-202ENST00000539746 IDH2P48735 452 aaKnown RBP10.78□□□□□ -0.68
VTN-202ENST00000539746 ZNF136P52737 540 aa10.78□□□□□ -0.68
VTN-202ENST00000539746 SMSP52788 366 aa10.78□□□□□ -0.68
VTN-202ENST00000539746 CTBP2P56545 445 aa10.78□□□□□ -0.68
VTN-202ENST00000539746 DSCR4P56555 118 aaPredicted RBP10.78□□□□□ -0.68
VTN-202ENST00000539746 FBXW4P57775 412 aa10.78□□□□□ -0.68
VTN-202ENST00000539746 PRPS1P60891 318 aa10.78□□□□□ -0.68
VTN-202ENST00000539746 TEKQ02763 1124 aa10.78□□□□□ -0.68
VTN-202ENST00000539746 TSPAN31Q12999 210 aa10.78□□□□□ -0.68
VTN-202ENST00000539746 CLN3Q13286 438 aa10.78□□□□□ -0.68
VTN-202ENST00000539746 TOP3AQ13472 1001 aaPredicted RBP10.78□□□□□ -0.68
VTN-202ENST00000539746 PDSS1Q5T2R2 415 aa10.78□□□□□ -0.68
VTN-202ENST00000539746 HMBOX1Q6NT76 420 aa10.78□□□□□ -0.68
VTN-202ENST00000539746 C1orf94Q6P1W5 598 aa10.78□□□□□ -0.68
VTN-202ENST00000539746 CASP12Q6UXS9 341 aa10.78□□□□□ -0.68
VTN-202ENST00000539746 CCDC81Q6ZN84 652 aa10.78□□□□□ -0.68
VTN-202ENST00000539746 GDF7Q7Z4P5 450 aa10.78□□□□□ -0.68
VTN-202ENST00000539746 TSPYL5Q86VY4 417 aaPredicted RBP10.78□□□□□ -0.68
VTN-202ENST00000539746 PRR22Q8IZ63 422 aa10.78□□□□□ -0.68
VTN-202ENST00000539746 AQP11Q8NBQ7 271 aa10.78□□□□□ -0.68
VTN-202ENST00000539746 OR4C15Q8NGM1 316 aa10.78□□□□□ -0.68
VTN-202ENST00000539746 OR52J3Q8NH60 311 aa10.78□□□□□ -0.68
VTN-202ENST00000539746 SLC7A13Q8TCU3 470 aa10.78□□□□□ -0.68
VTN-202ENST00000539746 CNOT9Q92600 299 aaKnown RBP10.78□□□□□ -0.68
VTN-202ENST00000539746 ZG16BQ96DA0 208 aa10.78□□□□□ -0.68
VTN-202ENST00000539746 FRMD6Q96NE9 622 aa10.78□□□□□ -0.68
VTN-202ENST00000539746 FEVQ99581 238 aa10.78□□□□□ -0.68
VTN-202ENST00000539746 PIGQQ9BRB3 760 aa10.78□□□□□ -0.68
VTN-202ENST00000539746 ADI1Q9BV57 179 aa10.78□□□□□ -0.68
VTN-202ENST00000539746 SCNM1Q9BWG6 230 aa10.78□□□□□ -0.68
VTN-202ENST00000539746 GABARAPL3Q9BY60 117 aa10.78□□□□□ -0.68
VTN-202ENST00000539746 ANKRD60Q9BZ19 345 aa10.78□□□□□ -0.68
VTN-202ENST00000539746 RLIMQ9NVW2 624 aa10.78□□□□□ -0.68
VTN-202ENST00000539746 IMPAD1Q9NX62 359 aa10.78□□□□□ -0.68
VTN-202ENST00000539746 QPCTLQ9NXS2 382 aa10.78□□□□□ -0.68
VTN-202ENST00000539746 GPR83Q9NYM4 423 aa10.78□□□□□ -0.68
VTN-202ENST00000539746 LRFN1Q9P244 771 aa10.78□□□□□ -0.68
VTN-202ENST00000539746 CORINQ9Y5Q5 1042 aa10.78□□□□□ -0.68
VTN-202ENST00000539746 A0A1B0GWA3 101 aa10.77□□□□□ -0.69
VTN-202ENST00000539746 IRGMA1A4Y4 181 aa10.77□□□□□ -0.69
VTN-202ENST00000539746 OR5H15A6NDH6 313 aa10.77□□□□□ -0.69
VTN-202ENST00000539746 A8MVM7 634 aa10.77□□□□□ -0.69
VTN-202ENST00000539746 TMEM229AB2RXF0 380 aa10.77□□□□□ -0.69
VTN-202ENST00000539746 SLC16A6O15403 523 aa10.77□□□□□ -0.69
VTN-202ENST00000539746 KLK10O43240 276 aa10.77□□□□□ -0.69
VTN-202ENST00000539746 C1QCP02747 245 aa10.77□□□□□ -0.69
VTN-202ENST00000539746 SAGP10523 405 aaPredicted RBP10.77□□□□□ -0.69
VTN-202ENST00000539746 NR2C1P13056 603 aa10.77□□□□□ -0.69
VTN-202ENST00000539746 CNR1P21554 472 aa10.77□□□□□ -0.69
VTN-202ENST00000539746 RYKP34925 604 aa10.77□□□□□ -0.69
VTN-202ENST00000539746 PLA2G5P39877 138 aa10.77□□□□□ -0.69
VTN-202ENST00000539746 EIF2S3P41091 472 aaKnown RBP10.77□□□□□ -0.69
VTN-202ENST00000539746 EFNA3P52797 238 aa10.77□□□□□ -0.69
VTN-202ENST00000539746 DLX5P56178 289 aa10.77□□□□□ -0.69
VTN-202ENST00000539746 ARG2P78540 354 aa10.77□□□□□ -0.69
VTN-202ENST00000539746 IL1RL1Q01638 556 aa10.77□□□□□ -0.69
VTN-202ENST00000539746 ZNF117Q03924 483 aa10.77□□□□□ -0.69
VTN-202ENST00000539746 COL28A1Q2UY09 1125 aa10.77□□□□□ -0.69
VTN-202ENST00000539746 IQCCQ4KMZ1 466 aa10.77□□□□□ -0.69
VTN-202ENST00000539746 C3orf33Q6P1S2 294 aa10.77□□□□□ -0.69
VTN-202ENST00000539746 PODNL1Q6PEZ8 512 aa10.77□□□□□ -0.69
VTN-202ENST00000539746 RASSF6Q6ZTQ3 369 aa10.77□□□□□ -0.69
VTN-202ENST00000539746 MARCH3Q86UD3 253 aa10.77□□□□□ -0.69
VTN-202ENST00000539746 OR10G3Q8NGC4 313 aa10.77□□□□□ -0.69
VTN-202ENST00000539746 OR10Q1Q8NGQ4 319 aa10.77□□□□□ -0.69
VTN-202ENST00000539746 GRHL3Q8TE85 626 aa10.77□□□□□ -0.69
VTN-202ENST00000539746 DUSP19Q8WTR2 217 aa10.77□□□□□ -0.69
VTN-202ENST00000539746 CYGBQ8WWM9 190 aa10.77□□□□□ -0.69
VTN-202ENST00000539746 ZHX1-C8orf76Q96EF9 292 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms