RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 OTUD3Q5T2D3 398 aaPredicted RBP3.41□□□□□ -1.86
AC055720.1-201ENST00000539552 C6orf183Q5T699 404 aa3.41□□□□□ -1.86
AC055720.1-201ENST00000539552 LGSNQ5TDP6 509 aa3.41□□□□□ -1.86
AC055720.1-201ENST00000539552 NDUFAF5Q5TEU4 345 aa3.41□□□□□ -1.86
AC055720.1-201ENST00000539552 CWC27Q6UX04 472 aaKnown RBP3.41□□□□□ -1.86
AC055720.1-201ENST00000539552 CEACAM20Q6UY09 585 aa3.41□□□□□ -1.86
AC055720.1-201ENST00000539552 LINGO4Q6UY18 593 aa3.41□□□□□ -1.86
AC055720.1-201ENST00000539552 HSDL2Q6YN16 418 aa3.41□□□□□ -1.86
AC055720.1-201ENST00000539552 ZNF793Q6ZN11 406 aa3.41□□□□□ -1.86
AC055720.1-201ENST00000539552 MON1BQ7L1V2 547 aa3.41□□□□□ -1.86
AC055720.1-201ENST00000539552 PRUNE1Q86TP1 453 aa3.41□□□□□ -1.86
AC055720.1-201ENST00000539552 CYP4Z1Q86W10 505 aa3.41□□□□□ -1.86
AC055720.1-201ENST00000539552 SLC26A11Q86WA9 606 aa3.41□□□□□ -1.86
AC055720.1-201ENST00000539552 SERPINA9Q86WD7 417 aa3.41□□□□□ -1.86
AC055720.1-201ENST00000539552 TBC1D10CQ8IV04 446 aa3.41□□□□□ -1.86
AC055720.1-201ENST00000539552 MFSD6LQ8IWD5 586 aa3.41□□□□□ -1.86
AC055720.1-201ENST00000539552 MMD2Q8IY49 270 aa3.41□□□□□ -1.86
AC055720.1-201ENST00000539552 SLC38A6Q8IZM9 456 aa3.41□□□□□ -1.86
AC055720.1-201ENST00000539552 SPEM1Q8N4L4 309 aa3.41□□□□□ -1.86
AC055720.1-201ENST00000539552 CLDN19Q8N6F1 224 aa3.41□□□□□ -1.86
AC055720.1-201ENST00000539552 MLKLQ8NB16 471 aa3.41□□□□□ -1.86
AC055720.1-201ENST00000539552 NOA1Q8NC60 698 aaKnown RBP3.41□□□□□ -1.86
AC055720.1-201ENST00000539552 OR9G4Q8NGQ1 327 aa3.41□□□□□ -1.86
AC055720.1-201ENST00000539552 PHOSPHO2Q8TCD6 241 aa3.41□□□□□ -1.86
AC055720.1-201ENST00000539552 SMPDL3AQ92484 453 aa3.41□□□□□ -1.86
AC055720.1-201ENST00000539552 TSACCQ96A04 125 aaPredicted RBP3.41□□□□□ -1.86
AC055720.1-201ENST00000539552 CCDC124Q96CT7 223 aaKnown RBP3.41□□□□□ -1.86
AC055720.1-201ENST00000539552 C10orf35Q96D05 121 aa3.41□□□□□ -1.86
AC055720.1-201ENST00000539552 PLEKHA8Q96JA3 519 aa3.41□□□□□ -1.86
AC055720.1-201ENST00000539552 NSMCE3Q96MG7 304 aa3.41□□□□□ -1.86
AC055720.1-201ENST00000539552 NDNQ99608 321 aa3.41□□□□□ -1.86
AC055720.1-201ENST00000539552 CNPY3Q9BT09 278 aa3.41□□□□□ -1.86
AC055720.1-201ENST00000539552 DPH7Q9BTV6 452 aa3.41□□□□□ -1.86
AC055720.1-201ENST00000539552 RAB11FIP5Q9BXF6 653 aa3.41□□□□□ -1.86
AC055720.1-201ENST00000539552 ERVK-6Q9BXR3 956 aa3.41□□□□□ -1.86
AC055720.1-201ENST00000539552 NPFFR1Q9GZQ6 430 aa3.41□□□□□ -1.86
AC055720.1-201ENST00000539552 MIS12Q9H081 205 aa3.41□□□□□ -1.86
AC055720.1-201ENST00000539552 SDCBP2Q9H190 292 aa3.41□□□□□ -1.86
AC055720.1-201ENST00000539552 SEMA6AQ9H2E6 1030 aa3.41□□□□□ -1.86
AC055720.1-201ENST00000539552 RIMS4Q9H426 269 aaPredicted RBP3.41□□□□□ -1.86
AC055720.1-201ENST00000539552 SAV1Q9H4B6 383 aaPredicted RBP3.41□□□□□ -1.86
AC055720.1-201ENST00000539552 CCNB1IP1Q9NPC3 277 aa3.41□□□□□ -1.86
AC055720.1-201ENST00000539552 SPAG4Q9NPE6 437 aa3.41□□□□□ -1.86
AC055720.1-201ENST00000539552 DMAP1Q9NPF5 467 aaPredicted RBP3.41□□□□□ -1.86
AC055720.1-201ENST00000539552 SLC52A3Q9NQ40 469 aa3.41□□□□□ -1.86
AC055720.1-201ENST00000539552 ECHDC1Q9NTX5 307 aa3.41□□□□□ -1.86
AC055720.1-201ENST00000539552 TMEM45AQ9NWC5 275 aa3.41□□□□□ -1.86
AC055720.1-201ENST00000539552 DCDC2Q9UHG0 476 aa3.41□□□□□ -1.86
AC055720.1-201ENST00000539552 MRTO4Q9UKD2 239 aaKnown RBP3.41□□□□□ -1.86
AC055720.1-201ENST00000539552 IKZF2Q9UKS7 526 aa3.41□□□□□ -1.86
AC055720.1-201ENST00000539552 PSMD13Q9UNM6 376 aa3.41□□□□□ -1.86
AC055720.1-201ENST00000539552 EXOGQ9Y2C4 368 aaKnown RBP3.41□□□□□ -1.86
AC055720.1-201ENST00000539552 F8P00451 2351 aa3.41□□□□□ -1.86
AC055720.1-201ENST00000539552 PTPRQQ9UMZ3 2332 aa3.41□□□□□ -1.86
AC055720.1-201ENST00000539552 OTOFQ9HC10 1997 aa3.4□□□□□ -1.86
AC055720.1-201ENST00000539552 HIVEP1P15822 2718 aa3.4□□□□□ -1.86
AC055720.1-201ENST00000539552 KIR2DS5A0A0G2JLQ3 304 aa3.4□□□□□ -1.87
AC055720.1-201ENST00000539552 A0A1W2PNV4 684 aa3.4□□□□□ -1.87
AC055720.1-201ENST00000539552 SHISA7A6NL88 538 aa3.4□□□□□ -1.87
AC055720.1-201ENST00000539552 C2CD4BA6NLJ0 364 aa3.4□□□□□ -1.87
AC055720.1-201ENST00000539552 C15orf62A8K5M9 175 aa3.4□□□□□ -1.87
AC055720.1-201ENST00000539552 KCNU1A8MYU2 1149 aa3.4□□□□□ -1.87
AC055720.1-201ENST00000539552 B4DGG1 531 aa3.4□□□□□ -1.87
AC055720.1-201ENST00000539552 E5RGE8 158 aa3.4□□□□□ -1.87
AC055720.1-201ENST00000539552 E7ENQ6 273 aa3.4□□□□□ -1.87
AC055720.1-201ENST00000539552 KIR2DS3K7RE56 304 aa3.4□□□□□ -1.87
AC055720.1-201ENST00000539552 DLGAP1O14490 977 aa3.4□□□□□ -1.87
AC055720.1-201ENST00000539552 TRAFD1O14545 582 aaPredicted RBP3.4□□□□□ -1.87
AC055720.1-201ENST00000539552 WNT9BO14905 357 aa3.4□□□□□ -1.87
AC055720.1-201ENST00000539552 SCAMP2O15127 329 aaKnown RBP3.4□□□□□ -1.87
AC055720.1-201ENST00000539552 COCHO43405 550 aa3.4□□□□□ -1.87
AC055720.1-201ENST00000539552 ITM2AO43736 263 aa3.4□□□□□ -1.87
AC055720.1-201ENST00000539552 TSPAN2O60636 221 aa3.4□□□□□ -1.87
AC055720.1-201ENST00000539552 ZNF189O75820 626 aaPredicted RBP3.4□□□□□ -1.87
AC055720.1-201ENST00000539552 CLDN9O95484 217 aa3.4□□□□□ -1.87
AC055720.1-201ENST00000539552 EML2O95834 649 aa3.4□□□□□ -1.87
AC055720.1-201ENST00000539552 VTNP04004 478 aa3.4□□□□□ -1.87
AC055720.1-201ENST00000539552 RETP07949 1114 aa3.4□□□□□ -1.87
AC055720.1-201ENST00000539552 HSMCR30P0CW71 290 aa3.4□□□□□ -1.87
AC055720.1-201ENST00000539552 CD59P13987 128 aa3.4□□□□□ -1.87
AC055720.1-201ENST00000539552 ATP1B2P14415 290 aaPredicted RBP3.4□□□□□ -1.87
AC055720.1-201ENST00000539552 HMGB2P26583 209 aaKnown RBP3.4□□□□□ -1.87
AC055720.1-201ENST00000539552 GJB2P29033 226 aa3.4□□□□□ -1.87
AC055720.1-201ENST00000539552 HMOX2P30519 316 aa3.4□□□□□ -1.87
AC055720.1-201ENST00000539552 STX2P32856 288 aa3.4□□□□□ -1.87
AC055720.1-201ENST00000539552 AHRP35869 848 aa3.4□□□□□ -1.87
AC055720.1-201ENST00000539552 P2RY2P41231 377 aa3.4□□□□□ -1.87
AC055720.1-201ENST00000539552 NKX2-1P43699 371 aaPredicted RBP3.4□□□□□ -1.87
AC055720.1-201ENST00000539552 ACADSBP45954 432 aa3.4□□□□□ -1.87
AC055720.1-201ENST00000539552 OGDHQ02218 1023 aa3.4□□□□□ -1.87
AC055720.1-201ENST00000539552 GHRHRQ02643 423 aa3.4□□□□□ -1.87
AC055720.1-201ENST00000539552 PMS2P3Q13401 168 aa3.4□□□□□ -1.87
AC055720.1-201ENST00000539552 PEX6Q13608 980 aa3.4□□□□□ -1.87
AC055720.1-201ENST00000539552 GK3PQ14409 553 aa3.4□□□□□ -1.87
AC055720.1-201ENST00000539552 GRB14Q14449 540 aa3.4□□□□□ -1.87
AC055720.1-201ENST00000539552 CTF1Q16619 201 aa3.4□□□□□ -1.87
AC055720.1-201ENST00000539552 GLYR1Q49A26 553 aaPredicted RBP3.4□□□□□ -1.87
AC055720.1-201ENST00000539552 GGTA1PQ4G0N0 100 aa3.4□□□□□ -1.87
AC055720.1-201ENST00000539552 EARS2Q5JPH6 523 aaKnown RBP3.4□□□□□ -1.87
AC055720.1-201ENST00000539552 PRAMEF17Q5VTA0 474 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms