RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 KCNN3Q9UGI6 736 aa8.96□□□□□ -0.97
CDH13-204ENST00000539548 CAMK2AQ9UQM7 478 aa8.96□□□□□ -0.97
CDH13-204ENST00000539548 TMEM5Q9Y2B1 443 aa8.96□□□□□ -0.97
CDH13-204ENST00000539548 SLC35A3Q9Y2D2 325 aa8.96□□□□□ -0.97
CDH13-204ENST00000539548 OR1A2Q9Y585 309 aa8.96□□□□□ -0.97
CDH13-204ENST00000539548 DOCK9Q9BZ29 2069 aa8.96□□□□□ -0.98
CDH13-204ENST00000539548 LOC105369274A0A096LPK9 316 aa8.96□□□□□ -0.98
CDH13-204ENST00000539548 CDHR4A6H8M9 788 aa8.96□□□□□ -0.98
CDH13-204ENST00000539548 PRR19A6NJB7 356 aa8.96□□□□□ -0.98
CDH13-204ENST00000539548 B8ZZF3 427 aa8.96□□□□□ -0.98
CDH13-204ENST00000539548 LRRN3E7EW58 273 aa8.96□□□□□ -0.98
CDH13-204ENST00000539548 BTN3A3O00478 584 aa8.96□□□□□ -0.98
CDH13-204ENST00000539548 OGG1O15527 345 aa8.96□□□□□ -0.98
CDH13-204ENST00000539548 FMO6PO60774 539 aa8.96□□□□□ -0.98
CDH13-204ENST00000539548 KCNJ13O60928 360 aa8.96□□□□□ -0.98
CDH13-204ENST00000539548 PTP4A3O75365 173 aa8.96□□□□□ -0.98
CDH13-204ENST00000539548 SERPINA3P01011 423 aa8.96□□□□□ -0.98
CDH13-204ENST00000539548 PDGFAP04085 211 aa8.96□□□□□ -0.98
CDH13-204ENST00000539548 DBIP07108 87 aaKnown RBP8.96□□□□□ -0.98
CDH13-204ENST00000539548 CD3GP09693 182 aa8.96□□□□□ -0.98
CDH13-204ENST00000539548 SAGP10523 405 aaPredicted RBP8.96□□□□□ -0.98
CDH13-204ENST00000539548 IL9P15248 144 aa8.96□□□□□ -0.98
CDH13-204ENST00000539548 CSF2RAP15509 400 aa8.96□□□□□ -0.98
CDH13-204ENST00000539548 PTNP21246 168 aa8.96□□□□□ -0.98
CDH13-204ENST00000539548 RPS4Y1P22090 263 aaKnown RBP8.96□□□□□ -0.98
CDH13-204ENST00000539548 HTR2AP28223 471 aa8.96□□□□□ -0.98
CDH13-204ENST00000539548 NDUFS1P28331 727 aa8.96□□□□□ -0.98
CDH13-204ENST00000539548 ACVR1BP36896 505 aa8.96□□□□□ -0.98
CDH13-204ENST00000539548 CLDN2P57739 230 aa8.96□□□□□ -0.98
CDH13-204ENST00000539548 RPS7P62081 194 aaKnown RBP8.96□□□□□ -0.98
CDH13-204ENST00000539548 ACTC1P68032 377 aa8.96□□□□□ -0.98
CDH13-204ENST00000539548 ACTA1P68133 377 aa8.96□□□□□ -0.98
CDH13-204ENST00000539548 DGCR2P98153 550 aa8.96□□□□□ -0.98
CDH13-204ENST00000539548 RGS1Q08116 209 aa8.96□□□□□ -0.98
CDH13-204ENST00000539548 DYRK1AQ13627 763 aa8.96□□□□□ -0.98
CDH13-204ENST00000539548 ARHGEF6Q15052 776 aa8.96□□□□□ -0.98
CDH13-204ENST00000539548 DUSP5Q16690 384 aa8.96□□□□□ -0.98
CDH13-204ENST00000539548 TOR2AQ5JU69 321 aa8.96□□□□□ -0.98
CDH13-204ENST00000539548 C1orf53Q5VUE5 145 aa8.96□□□□□ -0.98
CDH13-204ENST00000539548 SLC22A10Q63ZE4 541 aa8.96□□□□□ -0.98
CDH13-204ENST00000539548 THSD4Q6ZMP0 1018 aa8.96□□□□□ -0.98
CDH13-204ENST00000539548 FGD2Q7Z6J4 655 aa8.96□□□□□ -0.98
CDH13-204ENST00000539548 SFTPA1Q8IWL2 248 aa8.96□□□□□ -0.98
CDH13-204ENST00000539548 OR4N4Q8N0Y3 316 aa8.96□□□□□ -0.98
CDH13-204ENST00000539548 OR8H3Q8N146 312 aa8.96□□□□□ -0.98
CDH13-204ENST00000539548 SMPDL3BQ92485 455 aa8.96□□□□□ -0.98
CDH13-204ENST00000539548 GHSRQ92847 366 aa8.96□□□□□ -0.98
CDH13-204ENST00000539548 ARMC5Q96C12 935 aa8.96□□□□□ -0.98
CDH13-204ENST00000539548 OR51V1Q9H2C8 321 aa8.96□□□□□ -0.98
CDH13-204ENST00000539548 LRRN3Q9H3W5 708 aa8.96□□□□□ -0.98
CDH13-204ENST00000539548 WDR26Q9H7D7 661 aa8.96□□□□□ -0.98
CDH13-204ENST00000539548 SPHK1Q9NYA1 384 aa8.96□□□□□ -0.98
CDH13-204ENST00000539548 SIGLEC7Q9Y286 467 aa8.96□□□□□ -0.98
CDH13-204ENST00000539548 MRPS23Q9Y3D9 190 aaKnown RBP8.96□□□□□ -0.98
CDH13-204ENST00000539548 GOLGA4Q13439 2230 aaKnown RBP8.96□□□□□ -0.98
CDH13-204ENST00000539548 TBC1D3EA0A087X179 549 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 CENPVL1A0A0U1RR11 272 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 ANKRD61A6NGH8 418 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 OTOL1A6NHN0 477 aaPredicted RBP8.95□□□□□ -0.98
CDH13-204ENST00000539548 RIIAD1A6NNX1 92 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 MEN1O00255 615 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 GPR171O14626 319 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 CTDSPLO15194 276 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 TPD52L2O43399 206 aaKnown RBP8.95□□□□□ -0.98
CDH13-204ENST00000539548 LATO43561 262 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 PCDH8O95206 1070 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 EPXP11678 715 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 EPCAMP16422 314 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 DRD3P35462 400 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 VIPR2P41587 438 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 MNX1P50219 401 aaPredicted RBP8.95□□□□□ -0.98
CDH13-204ENST00000539548 HSF2Q03933 536 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 COL9A2Q14055 689 aaPredicted RBP8.95□□□□□ -0.98
CDH13-204ENST00000539548 GPR68Q15743 365 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 RPE65Q16518 533 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 MAPK14Q16539 360 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 ST3GAL2Q16842 350 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 LGALSLQ3ZCW2 172 aaPredicted RBP8.95□□□□□ -0.98
CDH13-204ENST00000539548 TJAP1Q5JTD0 557 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 GPR139Q6DWJ6 353 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 ZNF619Q8N2I2 560 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 OR4K14Q8NGD5 310 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 GAL3ST3Q96A11 431 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 BPIFA2Q96DR5 249 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 CMTM3Q96MX0 182 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 ZNF350Q9GZX5 532 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 KLHL1Q9NR64 748 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 PHPT1Q9NRX4 125 aaPredicted RBP8.95□□□□□ -0.98
CDH13-204ENST00000539548 EMC3Q9P0I2 261 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 RABL2AQ9UBK7 228 aaPredicted RBP8.95□□□□□ -0.98
CDH13-204ENST00000539548 ST6GALNAC2Q9UJ37 374 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 SCP2D1Q9UJQ7 156 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 RABL2BQ9UNT1 228 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 BAIAP2Q9UQB8 552 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 KCNK6Q9Y257 313 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 NPTNQ9Y639 398 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 SCN3AQ9NY46 2000 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 OR5K3A6NET4 321 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 TRABD2BA6NFA1 517 aa8.95□□□□□ -0.98
CDH13-204ENST00000539548 IFNA7P01567 189 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms