RNA–Protein interactions for RNA: ENST00000539177.1

CCDC144NL-202, Transcript of coiled-coil domain containing 144 family, N-terminal like, humanhuman

TSL 3

Gene CCDC144NL, Length 443 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-202ENST00000539177 SMAD9O15198 467 aaKnown RBP12.87□□□□□ -0.35
CCDC144NL-202ENST00000539177 RGS14O43566 566 aa12.87□□□□□ -0.35
CCDC144NL-202ENST00000539177 TCF21O43680 179 aa12.87□□□□□ -0.35
CCDC144NL-202ENST00000539177 TGFAP01135 160 aa12.87□□□□□ -0.35
CCDC144NL-202ENST00000539177 INHBAP08476 426 aa12.87□□□□□ -0.35
CCDC144NL-202ENST00000539177 PTAFRP25105 342 aa12.87□□□□□ -0.35
CCDC144NL-202ENST00000539177 CFPP27918 469 aa12.87□□□□□ -0.35
CCDC144NL-202ENST00000539177 MAP3K8P41279 467 aa12.87□□□□□ -0.35
CCDC144NL-202ENST00000539177 PDLIM4P50479 330 aa12.87□□□□□ -0.35
CCDC144NL-202ENST00000539177 CR1LQ2VPA4 569 aa12.87□□□□□ -0.35
CCDC144NL-202ENST00000539177 NDUFAF6Q330K2 333 aa12.87□□□□□ -0.35
CCDC144NL-202ENST00000539177 EMBQ6PCB8 327 aa12.87□□□□□ -0.35
CCDC144NL-202ENST00000539177 MEX3DQ86XN8 651 aaKnown RBP12.87□□□□□ -0.35
CCDC144NL-202ENST00000539177 RELL1Q8IUW5 271 aa12.87□□□□□ -0.35
CCDC144NL-202ENST00000539177 UBE2J2Q8N2K1 259 aa12.87□□□□□ -0.35
CCDC144NL-202ENST00000539177 TMEM151AQ8N4L1 468 aa12.87□□□□□ -0.35
CCDC144NL-202ENST00000539177 ZNF433Q8N7K0 673 aaPredicted RBP12.87□□□□□ -0.35
CCDC144NL-202ENST00000539177 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.87□□□□□ -0.35
CCDC144NL-202ENST00000539177 CDRT4Q8N9R6 151 aa12.87□□□□□ -0.35
CCDC144NL-202ENST00000539177 SLC16A11Q8NCK7 471 aa12.87□□□□□ -0.35
CCDC144NL-202ENST00000539177 FAM110BQ8TC76 370 aa12.87□□□□□ -0.35
CCDC144NL-202ENST00000539177 JADE3Q92613 823 aa12.87□□□□□ -0.35
CCDC144NL-202ENST00000539177 HOXB13Q92826 284 aaPredicted RBP12.87□□□□□ -0.35
CCDC144NL-202ENST00000539177 CIDECQ96AQ7 238 aaPredicted RBP12.87□□□□□ -0.35
CCDC144NL-202ENST00000539177 PIMREGQ9BSJ6 248 aa12.87□□□□□ -0.35
CCDC144NL-202ENST00000539177 ACSS3Q9H6R3 686 aa12.87□□□□□ -0.35
CCDC144NL-202ENST00000539177 UBQLN4Q9NRR5 601 aa12.87□□□□□ -0.35
CCDC144NL-202ENST00000539177 GIN1Q9NXP7 522 aa12.87□□□□□ -0.35
CCDC144NL-202ENST00000539177 TAS2R7Q9NYW3 318 aa12.87□□□□□ -0.35
CCDC144NL-202ENST00000539177 TRAF6Q9Y4K3 522 aa12.87□□□□□ -0.35
CCDC144NL-202ENST00000539177 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.86□□□□□ -0.35
CCDC144NL-202ENST00000539177 CCT8L1PA6NM43 557 aa12.86□□□□□ -0.35
CCDC144NL-202ENST00000539177 PDPK1O15530 556 aa12.86□□□□□ -0.35
CCDC144NL-202ENST00000539177 KCNAB3O43448 404 aa12.86□□□□□ -0.35
CCDC144NL-202ENST00000539177 PGM3O95394 542 aa12.86□□□□□ -0.35
CCDC144NL-202ENST00000539177 PHBP35232 272 aa12.86□□□□□ -0.35
CCDC144NL-202ENST00000539177 NR4A2P43354 598 aa12.86□□□□□ -0.35
CCDC144NL-202ENST00000539177 FOXA1P55317 472 aa12.86□□□□□ -0.35
CCDC144NL-202ENST00000539177 VSNL1P62760 191 aa12.86□□□□□ -0.35
CCDC144NL-202ENST00000539177 IMPG1Q17R60 797 aa12.86□□□□□ -0.35
CCDC144NL-202ENST00000539177 IQCCQ4KMZ1 466 aa12.86□□□□□ -0.35
CCDC144NL-202ENST00000539177 ARL13AQ5H913 290 aaPredicted RBP12.86□□□□□ -0.35
CCDC144NL-202ENST00000539177 ZNF544Q6NX49 715 aa12.86□□□□□ -0.35
CCDC144NL-202ENST00000539177 KLHL17Q6TDP4 642 aa12.86□□□□□ -0.35
CCDC144NL-202ENST00000539177 P2RY8Q86VZ1 359 aa12.86□□□□□ -0.35
CCDC144NL-202ENST00000539177 DEPDC4Q8N2C3 294 aa12.86□□□□□ -0.35
CCDC144NL-202ENST00000539177 COX18Q8N8Q8 333 aa12.86□□□□□ -0.35
CCDC144NL-202ENST00000539177 OR6Y1Q8NGX8 325 aa12.86□□□□□ -0.35
CCDC144NL-202ENST00000539177 RFWD2Q8NHY2 731 aa12.86□□□□□ -0.35
CCDC144NL-202ENST00000539177 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.86□□□□□ -0.35
CCDC144NL-202ENST00000539177 GIMAP5Q96F15 307 aa12.86□□□□□ -0.35
CCDC144NL-202ENST00000539177 CHMP6Q96FZ7 201 aa12.86□□□□□ -0.35
CCDC144NL-202ENST00000539177 C16orf58Q96GQ5 468 aa12.86□□□□□ -0.35
CCDC144NL-202ENST00000539177 EGLN2Q96KS0 407 aa12.86□□□□□ -0.35
CCDC144NL-202ENST00000539177 INPP5KQ9BT40 448 aa12.86□□□□□ -0.35
CCDC144NL-202ENST00000539177 SOX7Q9BT81 388 aa12.86□□□□□ -0.35
CCDC144NL-202ENST00000539177 TRMOQ9BU70 441 aa12.86□□□□□ -0.35
CCDC144NL-202ENST00000539177 ARGLU1Q9NWB6 273 aaPredicted RBP12.86□□□□□ -0.35
CCDC144NL-202ENST00000539177 SIRT5Q9NXA8 310 aa12.86□□□□□ -0.35
CCDC144NL-202ENST00000539177 NINJ2Q9NZG7 142 aa12.86□□□□□ -0.35
CCDC144NL-202ENST00000539177 CARD8Q9Y2G2 431 aa12.86□□□□□ -0.35
CCDC144NL-202ENST00000539177 SLC25A15Q9Y619 301 aa12.86□□□□□ -0.35
CCDC144NL-202ENST00000539177 A0A1W2PQD3 144 aa12.85□□□□□ -0.35
CCDC144NL-202ENST00000539177 TRIM49D1C9J1S8 452 aa12.85□□□□□ -0.35
CCDC144NL-202ENST00000539177 CYTIPO60759 359 aa12.85□□□□□ -0.35
CCDC144NL-202ENST00000539177 ENO1P06733 434 aaKnown RBP12.85□□□□□ -0.35
CCDC144NL-202ENST00000539177 ALOX5P09917 674 aa12.85□□□□□ -0.35
CCDC144NL-202ENST00000539177 ECHS1P30084 290 aa12.85□□□□□ -0.35
CCDC144NL-202ENST00000539177 P2RX1P51575 399 aa12.85□□□□□ -0.35
CCDC144NL-202ENST00000539177 RAC3P60763 192 aa12.85□□□□□ -0.35
CCDC144NL-202ENST00000539177 CHRNB3Q05901 458 aa12.85□□□□□ -0.35
CCDC144NL-202ENST00000539177 SELENBP1Q13228 472 aa12.85□□□□□ -0.35
CCDC144NL-202ENST00000539177 TRMT10CQ7L0Y3 403 aaKnown RBP12.85□□□□□ -0.35
CCDC144NL-202ENST00000539177 SSX8Q7RTT4 187 aa12.85□□□□□ -0.35
CCDC144NL-202ENST00000539177 RFLNBQ8N5W9 214 aa12.85□□□□□ -0.35
CCDC144NL-202ENST00000539177 TMCO5AQ8N6Q1 288 aa12.85□□□□□ -0.35
CCDC144NL-202ENST00000539177 CEP70Q8NHQ1 597 aa12.85□□□□□ -0.35
CCDC144NL-202ENST00000539177 ZNF75CPQ92670 426 aaPredicted RBP12.85□□□□□ -0.35
CCDC144NL-202ENST00000539177 ZNF524Q96C55 264 aa12.85□□□□□ -0.35
CCDC144NL-202ENST00000539177 FBXO17Q96EF6 278 aa12.85□□□□□ -0.35
CCDC144NL-202ENST00000539177 MS4A4EQ96PG1 132 aa12.85□□□□□ -0.35
CCDC144NL-202ENST00000539177 SORCS2Q96PQ0 1159 aa12.85□□□□□ -0.35
CCDC144NL-202ENST00000539177 OR5B2Q96R09 309 aa12.85□□□□□ -0.35
CCDC144NL-202ENST00000539177 PAFAH2Q99487 392 aa12.85□□□□□ -0.35
CCDC144NL-202ENST00000539177 ADAM19Q9H013 955 aa12.85□□□□□ -0.35
CCDC144NL-202ENST00000539177 NTMQ9P121 344 aa12.85□□□□□ -0.35
CCDC144NL-202ENST00000539177 GPC6Q9Y625 555 aaPredicted RBP12.85□□□□□ -0.35
CCDC144NL-202ENST00000539177 FKBP7Q9Y680 259 aa12.85□□□□□ -0.35
CCDC144NL-202ENST00000539177 PMF1-BGLAPU3KQ54 211 aa12.85□□□□□ -0.35
CCDC144NL-202ENST00000539177 NUP214P35658 2090 aaPredicted RBP12.84□□□□□ -0.35
CCDC144NL-202ENST00000539177 CCDC151A5D8V7 595 aa12.84□□□□□ -0.35
CCDC144NL-202ENST00000539177 H6PDO95479 791 aa12.84□□□□□ -0.35
CCDC144NL-202ENST00000539177 BMP4P12644 408 aa12.84□□□□□ -0.35
CCDC144NL-202ENST00000539177 PRKCAP17252 672 aa12.84□□□□□ -0.35
CCDC144NL-202ENST00000539177 TAC1P20366 129 aa12.84□□□□□ -0.35
CCDC144NL-202ENST00000539177 EFNA1P20827 205 aaPredicted RBP12.84□□□□□ -0.35
CCDC144NL-202ENST00000539177 CCR4P51679 360 aa12.84□□□□□ -0.35
CCDC144NL-202ENST00000539177 FOXG1P55316 489 aaPredicted RBP12.84□□□□□ -0.35
CCDC144NL-202ENST00000539177 LCP2Q13094 533 aa12.84□□□□□ -0.35
CCDC144NL-202ENST00000539177 ZNF385BQ569K4 471 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms