RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 CDC42EP2O14613 210 aa17.27■□□□□ 0.35
SFSWAP-207ENST00000538548 ARPC5O15511 151 aa17.27■□□□□ 0.35
SFSWAP-207ENST00000538548 PIP5K1CO60331 668 aa17.27■□□□□ 0.35
SFSWAP-207ENST00000538548 SERPINA3P01011 423 aa17.27■□□□□ 0.35
SFSWAP-207ENST00000538548 HIST1H2ABP04908 130 aa17.27■□□□□ 0.35
SFSWAP-207ENST00000538548 HMGN2P05204 90 aaKnown RBP17.27■□□□□ 0.35
SFSWAP-207ENST00000538548 STXBP1P61764 594 aaKnown RBP17.27■□□□□ 0.35
SFSWAP-207ENST00000538548 RPTNQ6XPR3 784 aa17.27■□□□□ 0.35
SFSWAP-207ENST00000538548 TMEM64Q6YI46 380 aa17.27■□□□□ 0.35
SFSWAP-207ENST00000538548 HIST3H2AQ7L7L0 130 aa17.27■□□□□ 0.35
SFSWAP-207ENST00000538548 KCT2Q8NC54 265 aa17.27■□□□□ 0.35
SFSWAP-207ENST00000538548 ZNF671Q8TAW3 534 aa17.27■□□□□ 0.35
SFSWAP-207ENST00000538548 AUTS2Q8WXX7 1259 aa17.27■□□□□ 0.35
SFSWAP-207ENST00000538548 HIST1H2ACQ93077 130 aa17.27■□□□□ 0.35
SFSWAP-207ENST00000538548 MRPS24Q96EL2 167 aaKnown RBP17.27■□□□□ 0.35
SFSWAP-207ENST00000538548 SLC38A3Q99624 504 aa17.27■□□□□ 0.35
SFSWAP-207ENST00000538548 MFRPQ9BY79 579 aa17.27■□□□□ 0.35
SFSWAP-207ENST00000538548 SLC25A13Q9UJS0 675 aa17.27■□□□□ 0.35
SFSWAP-207ENST00000538548 TET1Q8NFU7 2136 aa17.26■□□□□ 0.35
SFSWAP-207ENST00000538548 ZNF98A6NK75 572 aa17.26■□□□□ 0.35
SFSWAP-207ENST00000538548 SLC22A31A6NKX4 558 aa17.26■□□□□ 0.35
SFSWAP-207ENST00000538548 TEX46H3BTG2 121 aa17.26■□□□□ 0.35
SFSWAP-207ENST00000538548 J3QLW9 94 aa17.26■□□□□ 0.35
SFSWAP-207ENST00000538548 REM1O75628 298 aa17.26■□□□□ 0.35
SFSWAP-207ENST00000538548 OLFM2O95897 454 aa17.26■□□□□ 0.35
SFSWAP-207ENST00000538548 PLATP00750 562 aa17.26■□□□□ 0.35
SFSWAP-207ENST00000538548 ADRB1P08588 477 aa17.26■□□□□ 0.35
SFSWAP-207ENST00000538548 ZNF19P17023 458 aa17.26■□□□□ 0.35
SFSWAP-207ENST00000538548 NCBP2P52298 156 aaKnown RBP eCLIP17.26■□□□□ 0.358e-14■■■■□ 21.9
SFSWAP-207ENST00000538548 ZC3H14Q6PJT7 736 aaKnown RBP17.26■□□□□ 0.35
SFSWAP-207ENST00000538548 GSG1LQ6UXU4 331 aa17.26■□□□□ 0.35
SFSWAP-207ENST00000538548 SYT9Q86SS6 491 aa17.26■□□□□ 0.35
SFSWAP-207ENST00000538548 RNF180Q86T96 592 aa17.26■□□□□ 0.35
SFSWAP-207ENST00000538548 VRK2Q86Y07 508 aa17.26■□□□□ 0.35
SFSWAP-207ENST00000538548 EID2Q8N6I1 236 aa17.26■□□□□ 0.35
SFSWAP-207ENST00000538548 OR13C5Q8NGS8 318 aa17.26■□□□□ 0.35
SFSWAP-207ENST00000538548 ZNF461Q8TAF7 563 aa17.26■□□□□ 0.35
SFSWAP-207ENST00000538548 LGALS14Q8TCE9 139 aa17.26■□□□□ 0.35
SFSWAP-207ENST00000538548 BRIX1Q8TDN6 353 aaKnown RBP17.26■□□□□ 0.35
SFSWAP-207ENST00000538548 TMEM255BQ8WV15 326 aa17.26■□□□□ 0.35
SFSWAP-207ENST00000538548 HHIPL1Q96JK4 782 aa17.26■□□□□ 0.35
SFSWAP-207ENST00000538548 LMLNQ96KR4 655 aa17.26■□□□□ 0.35
SFSWAP-207ENST00000538548 C1QTNF2Q9BXJ5 285 aa17.26■□□□□ 0.35
SFSWAP-207ENST00000538548 ARL6Q9H0F7 186 aa17.26■□□□□ 0.35
SFSWAP-207ENST00000538548 SAV1Q9H4B6 383 aaPredicted RBP17.26■□□□□ 0.35
SFSWAP-207ENST00000538548 EPHX3Q9H6B9 360 aa17.26■□□□□ 0.35
SFSWAP-207ENST00000538548 NTMQ9P121 344 aa17.26■□□□□ 0.35
SFSWAP-207ENST00000538548 MPTX1A8MV57 137 aa17.26■□□□□ 0.35
SFSWAP-207ENST00000538548 GABARAPH6UMI1 98 aa17.26■□□□□ 0.35
SFSWAP-207ENST00000538548 ARL6IP5O75915 188 aa17.26■□□□□ 0.35
SFSWAP-207ENST00000538548 ZGLP1P0C6A0 271 aa17.26■□□□□ 0.35
SFSWAP-207ENST00000538548 TAS2R38P59533 333 aa17.26■□□□□ 0.35
SFSWAP-207ENST00000538548 C6orf132Q5T0Z8 1188 aa17.26■□□□□ 0.35
SFSWAP-207ENST00000538548 APOOLQ6UXV4 268 aa17.26■□□□□ 0.35
SFSWAP-207ENST00000538548 GDF7Q7Z4P5 450 aa17.26■□□□□ 0.35
SFSWAP-207ENST00000538548 PM20D2Q8IYS1 436 aa17.26■□□□□ 0.35
SFSWAP-207ENST00000538548 CMTM4Q8IZR5 234 aa17.26■□□□□ 0.35
SFSWAP-207ENST00000538548 OR5M9Q8NGP3 310 aa17.26■□□□□ 0.35
SFSWAP-207ENST00000538548 THEM6Q8WUY1 208 aa17.26■□□□□ 0.35
SFSWAP-207ENST00000538548 IL17FQ96PD4 163 aa17.26■□□□□ 0.35
SFSWAP-207ENST00000538548 HCAR1Q9BXC0 346 aa17.26■□□□□ 0.35
SFSWAP-207ENST00000538548 IFT22Q9H7X7 185 aa17.26■□□□□ 0.35
SFSWAP-207ENST00000538548 SCPEP1Q9HB40 452 aa17.26■□□□□ 0.35
SFSWAP-207ENST00000538548 IL5P05113 134 aa17.25■□□□□ 0.35
SFSWAP-207ENST00000538548 HOXB1P14653 301 aaPredicted RBP17.25■□□□□ 0.35
SFSWAP-207ENST00000538548 MAT2AP31153 395 aaKnown RBP17.25■□□□□ 0.35
SFSWAP-207ENST00000538548 OR12D2P58182 307 aa17.25■□□□□ 0.35
SFSWAP-207ENST00000538548 MCATQ8IVS2 390 aaKnown RBP17.25■□□□□ 0.35
SFSWAP-207ENST00000538548 OR52I2Q8NH67 350 aa17.25■□□□□ 0.35
SFSWAP-207ENST00000538548 SLC41A3Q96GZ6 507 aa17.25■□□□□ 0.35
SFSWAP-207ENST00000538548 DMRTA2Q96SC8 542 aa17.25■□□□□ 0.35
SFSWAP-207ENST00000538548 UTP23Q9BRU9 249 aaKnown RBP17.25■□□□□ 0.35
SFSWAP-207ENST00000538548 SLC38A1Q9H2H9 487 aa17.25■□□□□ 0.35
SFSWAP-207ENST00000538548 ELAC1Q9H777 363 aaKnown RBP17.25■□□□□ 0.35
SFSWAP-207ENST00000538548 EVA1AQ9H8M9 152 aa17.25■□□□□ 0.35
SFSWAP-207ENST00000538548 SLC35C2Q9NQQ7 365 aa17.25■□□□□ 0.35
SFSWAP-207ENST00000538548 KLHL28Q9NXS3 571 aa17.25■□□□□ 0.35
SFSWAP-207ENST00000538548 KLHL9Q9P2J3 617 aa17.25■□□□□ 0.35
SFSWAP-207ENST00000538548 C5orf42Q9H799 3197 aa17.25■□□□□ 0.35
SFSWAP-207ENST00000538548 THY1P04216 161 aa17.25■□□□□ 0.35
SFSWAP-207ENST00000538548 RGS8P57771 180 aaPredicted RBP17.25■□□□□ 0.35
SFSWAP-207ENST00000538548 UBXN2BQ14CS0 331 aa17.25■□□□□ 0.35
SFSWAP-207ENST00000538548 TPGS2Q68CL5 300 aa17.25■□□□□ 0.35
SFSWAP-207ENST00000538548 TRMT11Q7Z4G4 463 aaKnown RBP17.25■□□□□ 0.35
SFSWAP-207ENST00000538548 C2orf73Q8N5S3 287 aaPredicted RBP17.25■□□□□ 0.35
SFSWAP-207ENST00000538548 SFXN5Q8TD22 340 aa17.25■□□□□ 0.35
SFSWAP-207ENST00000538548 PNPLA2Q96AD5 504 aa17.25■□□□□ 0.35
SFSWAP-207ENST00000538548 ZG16BQ96DA0 208 aa17.25■□□□□ 0.35
SFSWAP-207ENST00000538548 AIF1LQ9BQI0 150 aa17.25■□□□□ 0.35
SFSWAP-207ENST00000538548 OR52D1Q9H346 318 aa17.25■□□□□ 0.35
SFSWAP-207ENST00000538548 KRCC1Q9NPI7 259 aaPredicted RBP17.25■□□□□ 0.35
SFSWAP-207ENST00000538548 NTNG1Q9Y2I2 539 aa17.25■□□□□ 0.35
SFSWAP-207ENST00000538548 KCNE3Q9Y6H6 103 aa17.25■□□□□ 0.35
SFSWAP-207ENST00000538548 CASP8AP2Q9UKL3 1982 aa17.25■□□□□ 0.35
SFSWAP-207ENST00000538548 CDHR4A6H8M9 788 aa17.24■□□□□ 0.35
SFSWAP-207ENST00000538548 KIAA0355O15063 1070 aa17.24■□□□□ 0.35
SFSWAP-207ENST00000538548 KRT33AO76009 404 aa17.24■□□□□ 0.35
SFSWAP-207ENST00000538548 OR5F1O95221 314 aa17.24■□□□□ 0.35
SFSWAP-207ENST00000538548 NTSP30990 170 aa17.24■□□□□ 0.35
SFSWAP-207ENST00000538548 PYCR1P32322 319 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms