RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 TMEM173Q86WV6 379 aaPredicted RBP10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 PTOV1Q86YD1 416 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 HS6ST3Q8IZP7 471 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 CARFQ8N187 725 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 GPR150Q8NGU9 434 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 PLD4Q96BZ4 506 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 PPP1R16AQ96I34 528 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 TEFMQ96QE5 360 aaKnown RBP10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 POLR2J3Q9H1A7 115 aaKnown RBP10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 LMAN1LQ9HAT1 526 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 TPT1P8Q9HAU6 139 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 THSD1Q9NS62 852 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 PCDHB10Q9UN67 800 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 RASD1Q9Y272 281 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 SRCAPQ6ZRS2 3230 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 OR2M5A3KFT3 312 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 ZNF705EA8MWA4 302 aaPredicted RBP10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 OR2A4O95047 310 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 FARS2O95363 451 aaKnown RBP10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 MT-ND4LP03901 98 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 OPN1SWP03999 348 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 RPL3P39023 403 aaKnown RBP10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 FEN1P39748 380 aaKnown RBP10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 NPBWR1P48145 328 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 STC1P52823 247 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 PKIAP61925 76 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 PITX1P78337 314 aaPredicted RBP10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 PCBP2Q15366 365 aaKnown RBP eCLIP10.16□□□□□ -0.788e-8■■■■□ 25.3
CLSTN3-207ENST00000537408 WDR53Q7Z5U6 358 aaPredicted RBP10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 TNFAIP8L1Q8WVP5 186 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 OSTF1Q92882 214 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 MTFMTQ96DP5 389 aaKnown RBP10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 PHYHIPLQ96FC7 376 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 OR2A7Q96R45 310 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 NEU1Q99519 415 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 NTMT1Q9BV86 223 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 PINK1Q9BXM7 581 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 TEX12Q9BXU0 123 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 WNT5BQ9H1J7 359 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 TSPAN10Q9H1Z9 355 aaPredicted RBP10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 EXOSC3Q9NQT5 275 aaKnown RBP10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 TMEM184CQ9NVA4 438 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 FLVCR2Q9UPI3 526 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 SCN10AQ9Y5Y9 1956 aa10.15□□□□□ -0.78
CLSTN3-207ENST00000537408 C9orf170A2RU37 121 aa10.15□□□□□ -0.78
CLSTN3-207ENST00000537408 OR2T1O43869 369 aa10.15□□□□□ -0.78
CLSTN3-207ENST00000537408 UBXN7O94888 489 aa10.15□□□□□ -0.78
CLSTN3-207ENST00000537408 IFNW1P05000 195 aa10.15□□□□□ -0.78
CLSTN3-207ENST00000537408 DDTP30046 118 aa10.15□□□□□ -0.78
CLSTN3-207ENST00000537408 RAD52P43351 418 aa10.15□□□□□ -0.78
CLSTN3-207ENST00000537408 DHPSP49366 369 aaPredicted RBP10.15□□□□□ -0.78
CLSTN3-207ENST00000537408 DGCR2P98153 550 aa10.15□□□□□ -0.78
CLSTN3-207ENST00000537408 FOXO1Q12778 655 aa10.15□□□□□ -0.78
CLSTN3-207ENST00000537408 SLC5A12Q1EHB4 618 aa10.15□□□□□ -0.78
CLSTN3-207ENST00000537408 CD200R1LQ6Q8B3 271 aa10.15□□□□□ -0.78
CLSTN3-207ENST00000537408 B3GLCTQ6Y288 498 aa10.15□□□□□ -0.78
CLSTN3-207ENST00000537408 GLT6D1Q7Z4J2 308 aa10.15□□□□□ -0.78
CLSTN3-207ENST00000537408 TGIF2LXQ8IUE1 241 aa10.15□□□□□ -0.78
CLSTN3-207ENST00000537408 ADGRG2Q8IZP9 1017 aa10.15□□□□□ -0.78
CLSTN3-207ENST00000537408 OR2L5Q8NG80 312 aa10.15□□□□□ -0.78
CLSTN3-207ENST00000537408 GUCD1Q96NT3 240 aa10.15□□□□□ -0.78
CLSTN3-207ENST00000537408 KCNK12Q9HB15 430 aa10.15□□□□□ -0.78
CLSTN3-207ENST00000537408 CA10Q9NS85 328 aa10.15□□□□□ -0.78
CLSTN3-207ENST00000537408 C19orf12Q9NSK7 152 aa10.15□□□□□ -0.78
CLSTN3-207ENST00000537408 SLC13A4Q9UKG4 626 aa10.15□□□□□ -0.78
CLSTN3-207ENST00000537408 NEU3Q9UQ49 428 aa10.15□□□□□ -0.78
CLSTN3-207ENST00000537408 SF3B6Q9Y3B4 125 aaKnown RBP10.15□□□□□ -0.78
CLSTN3-207ENST00000537408 WNT6Q9Y6F9 365 aa10.15□□□□□ -0.78
CLSTN3-207ENST00000537408 ATRXP46100 2492 aa10.15□□□□□ -0.78
CLSTN3-207ENST00000537408 MANBAO00462 879 aa10.15□□□□□ -0.78
CLSTN3-207ENST00000537408 CLDN11O75508 207 aa10.15□□□□□ -0.78
CLSTN3-207ENST00000537408 BEST1O76090 585 aa10.15□□□□□ -0.78
CLSTN3-207ENST00000537408 GASTP01350 101 aa10.15□□□□□ -0.78
CLSTN3-207ENST00000537408 EBLN1P0CF75 366 aa10.15□□□□□ -0.78
CLSTN3-207ENST00000537408 RHOQP17081 205 aa10.15□□□□□ -0.78
CLSTN3-207ENST00000537408 DRD1P21728 446 aa10.15□□□□□ -0.78
CLSTN3-207ENST00000537408 CCR7P32248 378 aa10.15□□□□□ -0.78
CLSTN3-207ENST00000537408 CRATP43155 626 aa10.15□□□□□ -0.78
CLSTN3-207ENST00000537408 CCR9P51686 369 aa10.15□□□□□ -0.78
CLSTN3-207ENST00000537408 MAT1AQ00266 395 aaKnown RBP10.15□□□□□ -0.78
CLSTN3-207ENST00000537408 SLC14A1Q13336 389 aa10.15□□□□□ -0.78
CLSTN3-207ENST00000537408 IRF4Q15306 451 aa10.15□□□□□ -0.78
CLSTN3-207ENST00000537408 ARSIQ5FYB1 569 aa10.15□□□□□ -0.78
CLSTN3-207ENST00000537408 SEZ6L2Q6UXD5 910 aa10.15□□□□□ -0.78
CLSTN3-207ENST00000537408 CPXM2Q8N436 756 aa10.15□□□□□ -0.78
CLSTN3-207ENST00000537408 SORCS1Q8WY21 1168 aa10.15□□□□□ -0.78
CLSTN3-207ENST00000537408 ABHD1Q96SE0 405 aa10.15□□□□□ -0.78
CLSTN3-207ENST00000537408 TAS2R5Q9NYW4 299 aa10.15□□□□□ -0.78
CLSTN3-207ENST00000537408 WASF3Q9UPY6 502 aa10.15□□□□□ -0.78
CLSTN3-207ENST00000537408 H7C0S8 307 aa10.15□□□□□ -0.79
CLSTN3-207ENST00000537408 IL5P05113 134 aa10.15□□□□□ -0.79
CLSTN3-207ENST00000537408 APEHP13798 732 aaKnown RBP10.15□□□□□ -0.79
CLSTN3-207ENST00000537408 EPB42P16452 691 aa10.15□□□□□ -0.79
CLSTN3-207ENST00000537408 TNFRSF1BP20333 461 aa10.15□□□□□ -0.79
CLSTN3-207ENST00000537408 GDNFP39905 211 aa10.15□□□□□ -0.79
CLSTN3-207ENST00000537408 VIPR2P41587 438 aa10.15□□□□□ -0.79
CLSTN3-207ENST00000537408 CSNK1EP49674 416 aaKnown RBP10.15□□□□□ -0.79
CLSTN3-207ENST00000537408 ART1P52961 327 aa10.15□□□□□ -0.79
CLSTN3-207ENST00000537408 CD81P60033 236 aa10.15□□□□□ -0.79
CLSTN3-207ENST00000537408 ZNF239Q16600 458 aaKnown RBP10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms