RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 MTERF1Q99551 399 aaKnown RBP8.06□□□□□ -1.12
CPSF7-217ENST00000537162 KCNS3Q9BQ31 491 aa8.06□□□□□ -1.12
CPSF7-217ENST00000537162 SLC30A2Q9BRI3 323 aa8.06□□□□□ -1.12
CPSF7-217ENST00000537162 DENND2DQ9H6A0 471 aaPredicted RBP8.06□□□□□ -1.12
CPSF7-217ENST00000537162 ZNF442Q9H7R0 627 aa8.06□□□□□ -1.12
CPSF7-217ENST00000537162 REV1Q9UBZ9 1251 aa8.06□□□□□ -1.12
CPSF7-217ENST00000537162 MALT1Q9UDY8 824 aa8.06□□□□□ -1.12
CPSF7-217ENST00000537162 AKR1B10O60218 316 aa8.05□□□□□ -1.12
CPSF7-217ENST00000537162 CDH2P19022 906 aaPredicted RBP8.05□□□□□ -1.12
CPSF7-217ENST00000537162 HNMTP50135 292 aa8.05□□□□□ -1.12
CPSF7-217ENST00000537162 HADHBP55084 474 aaKnown RBP8.05□□□□□ -1.12
CPSF7-217ENST00000537162 PRPS1P60891 318 aa8.05□□□□□ -1.12
CPSF7-217ENST00000537162 TUBA1BP68363 451 aa8.05□□□□□ -1.12
CPSF7-217ENST00000537162 TUBA4AP68366 448 aa8.05□□□□□ -1.12
CPSF7-217ENST00000537162 PSG6Q00889 435 aa8.05□□□□□ -1.12
CPSF7-217ENST00000537162 IRF8Q02556 426 aa8.05□□□□□ -1.12
CPSF7-217ENST00000537162 HIST2H2ACQ16777 129 aaPredicted RBP8.05□□□□□ -1.12
CPSF7-217ENST00000537162 HSP90AA5PQ58FG0 334 aa8.05□□□□□ -1.12
CPSF7-217ENST00000537162 HIST2H2AA3Q6FI13 130 aa8.05□□□□□ -1.12
CPSF7-217ENST00000537162 ANKRD16Q6P6B7 361 aa8.05□□□□□ -1.12
CPSF7-217ENST00000537162 ADAMTSL5Q6ZMM2 481 aa8.05□□□□□ -1.12
CPSF7-217ENST00000537162 TUBA1AQ71U36 451 aa8.05□□□□□ -1.12
CPSF7-217ENST00000537162 C17orf78Q8N4C9 275 aa8.05□□□□□ -1.12
CPSF7-217ENST00000537162 APH1AQ96BI3 265 aa8.05□□□□□ -1.12
CPSF7-217ENST00000537162 ZNF524Q96C55 264 aa8.05□□□□□ -1.12
CPSF7-217ENST00000537162 CHP1Q99653 195 aa8.05□□□□□ -1.12
CPSF7-217ENST00000537162 CAPS2Q9BXY5 557 aa8.05□□□□□ -1.12
CPSF7-217ENST00000537162 MRPL37Q9BZE1 423 aaKnown RBP8.05□□□□□ -1.12
CPSF7-217ENST00000537162 PRDM13Q9H4Q3 707 aa8.05□□□□□ -1.12
CPSF7-217ENST00000537162 C20orf96Q9NUD7 363 aaPredicted RBP8.05□□□□□ -1.12
CPSF7-217ENST00000537162 OXSMQ9NWU1 459 aa8.05□□□□□ -1.12
CPSF7-217ENST00000537162 PURGQ9UJV8 347 aaKnown RBP8.05□□□□□ -1.12
CPSF7-217ENST00000537162 OR10H1Q9Y4A9 318 aa8.05□□□□□ -1.12
CPSF7-217ENST00000537162 OARD1Q9Y530 152 aa8.05□□□□□ -1.12
CPSF7-217ENST00000537162 TRIM49D1C9J1S8 452 aa8.04□□□□□ -1.12
CPSF7-217ENST00000537162 UTS2O95399 124 aa8.04□□□□□ -1.12
CPSF7-217ENST00000537162 PLATP00750 562 aa8.04□□□□□ -1.12
CPSF7-217ENST00000537162 GSNP06396 782 aa8.04□□□□□ -1.12
CPSF7-217ENST00000537162 CELA3BP08861 270 aa8.04□□□□□ -1.12
CPSF7-217ENST00000537162 LINGO3P0C6S8 592 aa8.04□□□□□ -1.12
CPSF7-217ENST00000537162 CD1DP15813 335 aa8.04□□□□□ -1.12
CPSF7-217ENST00000537162 FUT4P22083 530 aa8.04□□□□□ -1.12
CPSF7-217ENST00000537162 PIK3CGP48736 1102 aa8.04□□□□□ -1.12
CPSF7-217ENST00000537162 TERF1P54274 439 aa8.04□□□□□ -1.12
CPSF7-217ENST00000537162 MRPS22P82650 360 aaKnown RBP8.04□□□□□ -1.12
CPSF7-217ENST00000537162 PRR5P85299 388 aa8.04□□□□□ -1.12
CPSF7-217ENST00000537162 SLC18A2Q05940 514 aa8.04□□□□□ -1.12
CPSF7-217ENST00000537162 LAPTM5Q13571 262 aa8.04□□□□□ -1.12
CPSF7-217ENST00000537162 E2F2Q14209 437 aa8.04□□□□□ -1.12
CPSF7-217ENST00000537162 TSNQ15631 228 aaKnown RBP8.04□□□□□ -1.12
CPSF7-217ENST00000537162 GRAMD1BQ3KR37 738 aa8.04□□□□□ -1.12
CPSF7-217ENST00000537162 NRN1LQ496H8 165 aa8.04□□□□□ -1.12
CPSF7-217ENST00000537162 PAGE2BQ5JRK9 111 aa8.04□□□□□ -1.12
CPSF7-217ENST00000537162 C11orf63Q6NUN7 778 aa8.04□□□□□ -1.12
CPSF7-217ENST00000537162 MED27Q6P2C8 311 aa8.04□□□□□ -1.12
CPSF7-217ENST00000537162 Q6ZSV7 163 aa8.04□□□□□ -1.12
CPSF7-217ENST00000537162 LSRQ86X29 649 aaPredicted RBP8.04□□□□□ -1.12
CPSF7-217ENST00000537162 TREML1Q86YW5 311 aa8.04□□□□□ -1.12
CPSF7-217ENST00000537162 LYG1Q8N1E2 194 aa8.04□□□□□ -1.12
CPSF7-217ENST00000537162 AGGF1Q8N302 714 aaeCLIP8.04□□□□□ -1.12
CPSF7-217ENST00000537162 PARP8Q8N3A8 854 aa8.04□□□□□ -1.12
CPSF7-217ENST00000537162 C11orf44Q8N8P7 122 aa8.04□□□□□ -1.12
CPSF7-217ENST00000537162 ZFP90Q8TF47 636 aa8.04□□□□□ -1.12
CPSF7-217ENST00000537162 RAB8BQ92930 207 aa8.04□□□□□ -1.12
CPSF7-217ENST00000537162 CNRIP1Q96F85 164 aaPredicted RBP8.04□□□□□ -1.12
CPSF7-217ENST00000537162 SH3YL1Q96HL8 342 aaPredicted RBP8.04□□□□□ -1.12
CPSF7-217ENST00000537162 ANP32EQ9BTT0 268 aa8.04□□□□□ -1.12
CPSF7-217ENST00000537162 ZNF416Q9BWM5 594 aa8.04□□□□□ -1.12
CPSF7-217ENST00000537162 KRTAP3-3Q9BYR6 98 aa8.04□□□□□ -1.12
CPSF7-217ENST00000537162 KRTAP3-2Q9BYR7 98 aa8.04□□□□□ -1.12
CPSF7-217ENST00000537162 TBL1XR1Q9BZK7 514 aa8.04□□□□□ -1.12
CPSF7-217ENST00000537162 MYEF2Q9P2K5 600 aaKnown RBP8.04□□□□□ -1.12
CPSF7-217ENST00000537162 RPUSD1Q9UJJ7 312 aaKnown RBP8.04□□□□□ -1.12
CPSF7-217ENST00000537162 NOSIPQ9Y314 301 aaKnown RBP8.04□□□□□ -1.12
CPSF7-217ENST00000537162 WIPI2Q9Y4P8 454 aa8.04□□□□□ -1.12
CPSF7-217ENST00000537162 DOCK11Q5JSL3 2073 aa8.03□□□□□ -1.12
CPSF7-217ENST00000537162 OR6C65A6NJZ3 312 aa8.03□□□□□ -1.12
CPSF7-217ENST00000537162 ZNF195O14628 629 aa8.03□□□□□ -1.12
CPSF7-217ENST00000537162 SYNGR3O43761 229 aa8.03□□□□□ -1.12
CPSF7-217ENST00000537162 LIASO43766 372 aa8.03□□□□□ -1.12
CPSF7-217ENST00000537162 WNT11O96014 354 aa8.03□□□□□ -1.12
CPSF7-217ENST00000537162 IGKV1D-16P01601 117 aa8.03□□□□□ -1.12
CPSF7-217ENST00000537162 AHSGP02765 367 aa8.03□□□□□ -1.12
CPSF7-217ENST00000537162 IGLL1P15814 213 aa8.03□□□□□ -1.12
CPSF7-217ENST00000537162 STIP1P31948 543 aaKnown RBP8.03□□□□□ -1.12
CPSF7-217ENST00000537162 MAGEB1P43366 347 aa8.03□□□□□ -1.12
CPSF7-217ENST00000537162 VPS41P49754 854 aa8.03□□□□□ -1.12
CPSF7-217ENST00000537162 ZNF41P51814 821 aaPredicted RBP8.03□□□□□ -1.12
CPSF7-217ENST00000537162 RWDD2BP57060 319 aa8.03□□□□□ -1.12
CPSF7-217ENST00000537162 RAC3P60763 192 aa8.03□□□□□ -1.12
CPSF7-217ENST00000537162 BASP1P80723 227 aaKnown RBP8.03□□□□□ -1.12
CPSF7-217ENST00000537162 POU3F1Q03052 451 aaPredicted RBP8.03□□□□□ -1.12
CPSF7-217ENST00000537162 EGR3Q06889 387 aa8.03□□□□□ -1.12
CPSF7-217ENST00000537162 HNRNPA0Q13151 305 aaKnown RBP8.03□□□□□ -1.12
CPSF7-217ENST00000537162 TBCCQ15814 346 aa8.03□□□□□ -1.12
CPSF7-217ENST00000537162 PDK4Q16654 411 aa8.03□□□□□ -1.12
CPSF7-217ENST00000537162 SLC48A1Q6P1K1 146 aa8.03□□□□□ -1.12
CPSF7-217ENST00000537162 BLOC1S3Q6QNY0 202 aa8.03□□□□□ -1.12
CPSF7-217ENST00000537162 BRD3OSQ6XYD6 125 aa8.03□□□□□ -1.12
CPSF7-217ENST00000537162 Q6YL49 198 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms