RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 KRTCAP2Q8N6L1 136 aa17.5■□□□□ 0.39
TNFRSF1B-204ENST00000536782 OR2W6PQ8NHA6 318 aa17.5■□□□□ 0.39
TNFRSF1B-204ENST00000536782 RAB3IL1Q8TBN0 382 aa17.5■□□□□ 0.39
TNFRSF1B-204ENST00000536782 HSD17B8Q92506 261 aa17.5■□□□□ 0.39
TNFRSF1B-204ENST00000536782 C3orf30Q96M34 536 aa17.5■□□□□ 0.39
TNFRSF1B-204ENST00000536782 BHLHE41Q9C0J9 482 aaPredicted RBP17.5■□□□□ 0.39
TNFRSF1B-204ENST00000536782 COQ10BQ9H8M1 238 aa17.5■□□□□ 0.39
TNFRSF1B-204ENST00000536782 LAMP3Q9UQV4 416 aa17.5■□□□□ 0.39
TNFRSF1B-204ENST00000536782 RNF115Q9Y4L5 304 aa17.5■□□□□ 0.39
TNFRSF1B-204ENST00000536782 FBN1P35555 2871 aaKnown RBP17.5■□□□□ 0.39
TNFRSF1B-204ENST00000536782 NPIPB9F8W1W9 429 aa17.49■□□□□ 0.39
TNFRSF1B-204ENST00000536782 EIF4E2O60573 245 aaKnown RBP17.49■□□□□ 0.39
TNFRSF1B-204ENST00000536782 SPAG7O75391 227 aa17.49■□□□□ 0.39
TNFRSF1B-204ENST00000536782 SKAP2O75563 359 aaPredicted RBP17.49■□□□□ 0.39
TNFRSF1B-204ENST00000536782 ADAP00813 363 aa17.49■□□□□ 0.39
TNFRSF1B-204ENST00000536782 NUDT17P0C025 328 aa17.49■□□□□ 0.39
TNFRSF1B-204ENST00000536782 SLC7A1P30825 629 aa17.49■□□□□ 0.39
TNFRSF1B-204ENST00000536782 RPS4XP62701 263 aaKnown RBP17.49■□□□□ 0.39
TNFRSF1B-204ENST00000536782 SELENBP1Q13228 472 aa17.49■□□□□ 0.39
TNFRSF1B-204ENST00000536782 P2RY6Q15077 328 aa17.49■□□□□ 0.39
TNFRSF1B-204ENST00000536782 TSC22D1Q15714 1073 aa17.49■□□□□ 0.39
TNFRSF1B-204ENST00000536782 NDUFAF6Q330K2 333 aa17.49■□□□□ 0.39
TNFRSF1B-204ENST00000536782 NCMAPQ5T1S8 102 aa17.49■□□□□ 0.39
TNFRSF1B-204ENST00000536782 BHLHB9Q6PI77 547 aa17.49■□□□□ 0.39
TNFRSF1B-204ENST00000536782 TMCO5AQ8N6Q1 288 aa17.49■□□□□ 0.39
TNFRSF1B-204ENST00000536782 TOR1AIP2Q8NFQ8 470 aa17.49■□□□□ 0.39
TNFRSF1B-204ENST00000536782 OR5W2Q8NH69 310 aa17.49■□□□□ 0.39
TNFRSF1B-204ENST00000536782 OR5AK3PQ8NH89 298 aa17.49■□□□□ 0.39
TNFRSF1B-204ENST00000536782 RFWD2Q8NHY2 731 aa17.49■□□□□ 0.39
TNFRSF1B-204ENST00000536782 TCP10LQ8TDR4 215 aa17.49■□□□□ 0.39
TNFRSF1B-204ENST00000536782 AENQ8WTP8 325 aaKnown RBP17.49■□□□□ 0.39
TNFRSF1B-204ENST00000536782 KISS1RQ969F8 398 aaPredicted RBP17.49■□□□□ 0.39
TNFRSF1B-204ENST00000536782 OR7D2Q96RA2 312 aa17.49■□□□□ 0.39
TNFRSF1B-204ENST00000536782 DUSP26Q9BV47 211 aa17.49■□□□□ 0.39
TNFRSF1B-204ENST00000536782 ESRP2Q9H6T0 727 aaKnown RBP17.49■□□□□ 0.39
TNFRSF1B-204ENST00000536782 NUP214P35658 2090 aaPredicted RBP17.48■□□□□ 0.39
TNFRSF1B-204ENST00000536782 INAFM1C9JVW0 142 aa17.48■□□□□ 0.39
TNFRSF1B-204ENST00000536782 CLOCKO15516 846 aa17.48■□□□□ 0.39
TNFRSF1B-204ENST00000536782 ZNF264O43296 627 aa17.48■□□□□ 0.39
TNFRSF1B-204ENST00000536782 CD3EP07766 207 aa17.48■□□□□ 0.39
TNFRSF1B-204ENST00000536782 UBL4AP11441 157 aa17.48■□□□□ 0.39
TNFRSF1B-204ENST00000536782 ENPP1P22413 925 aa17.48■□□□□ 0.39
TNFRSF1B-204ENST00000536782 CCR4P51679 360 aa17.48■□□□□ 0.39
TNFRSF1B-204ENST00000536782 RAC3P60763 192 aa17.48■□□□□ 0.39
TNFRSF1B-204ENST00000536782 ITGADQ13349 1161 aa17.48■□□□□ 0.39
TNFRSF1B-204ENST00000536782 CBFBQ13951 182 aa17.48■□□□□ 0.39
TNFRSF1B-204ENST00000536782 CAPRIN1Q14444 709 aaKnown RBP17.48■□□□□ 0.39
TNFRSF1B-204ENST00000536782 TAB1Q15750 504 aa17.48■□□□□ 0.39
TNFRSF1B-204ENST00000536782 SLC25A53Q5H9E4 307 aa17.48■□□□□ 0.39
TNFRSF1B-204ENST00000536782 RIMKLAQ8IXN7 391 aa17.48■□□□□ 0.39
TNFRSF1B-204ENST00000536782 OR5D16Q8NGK9 328 aa17.48■□□□□ 0.39
TNFRSF1B-204ENST00000536782 LILRB1Q8NHL6 650 aaPredicted RBP17.48■□□□□ 0.39
TNFRSF1B-204ENST00000536782 FBXW5Q969U6 566 aa17.48■□□□□ 0.39
TNFRSF1B-204ENST00000536782 ARL8AQ96BM9 186 aa17.48■□□□□ 0.39
TNFRSF1B-204ENST00000536782 TUBGCP3Q96CW5 907 aa17.48■□□□□ 0.39
TNFRSF1B-204ENST00000536782 SDF2Q99470 211 aa17.48■□□□□ 0.39
TNFRSF1B-204ENST00000536782 USB1Q9BQ65 265 aaKnown RBP17.48■□□□□ 0.39
TNFRSF1B-204ENST00000536782 KLHL9Q9P2J3 617 aa17.48■□□□□ 0.39
TNFRSF1B-204ENST00000536782 ZDHHC2Q9UIJ5 367 aa17.48■□□□□ 0.39
TNFRSF1B-204ENST00000536782 ABCA1O95477 2261 aa17.47■□□□□ 0.39
TNFRSF1B-204ENST00000536782 IGHV3-15A0A0B4J1V0 119 aa17.47■□□□□ 0.39
TNFRSF1B-204ENST00000536782 A0A1W2PNR3 127 aa17.47■□□□□ 0.39
TNFRSF1B-204ENST00000536782 DUXAA6NLW8 204 aa17.47■□□□□ 0.39
TNFRSF1B-204ENST00000536782 KIAA1324LA8MWY0 1029 aaPredicted RBP17.47■□□□□ 0.39
TNFRSF1B-204ENST00000536782 ARRB2P32121 409 aa17.47■□□□□ 0.39
TNFRSF1B-204ENST00000536782 SOAT1P35610 550 aa17.47■□□□□ 0.39
TNFRSF1B-204ENST00000536782 HBA1P69905 142 aa17.47■□□□□ 0.39
TNFRSF1B-204ENST00000536782 MAD2L1Q13257 205 aaPredicted RBP17.47■□□□□ 0.39
TNFRSF1B-204ENST00000536782 QPRTQ15274 297 aa17.47■□□□□ 0.39
TNFRSF1B-204ENST00000536782 PDZK1Q5T2W1 519 aa17.47■□□□□ 0.39
TNFRSF1B-204ENST00000536782 ZNF619Q8N2I2 560 aa17.47■□□□□ 0.39
TNFRSF1B-204ENST00000536782 ZNF524Q96C55 264 aa17.47■□□□□ 0.39
TNFRSF1B-204ENST00000536782 NMUR2Q9GZQ4 415 aa17.47■□□□□ 0.39
TNFRSF1B-204ENST00000536782 BCO1Q9HAY6 547 aa17.47■□□□□ 0.39
TNFRSF1B-204ENST00000536782 LGALS13Q9UHV8 139 aa17.47■□□□□ 0.39
TNFRSF1B-204ENST00000536782 SERINC4A6NH21 518 aa17.46■□□□□ 0.39
TNFRSF1B-204ENST00000536782 ZNF814B7Z6K7 855 aa17.46■□□□□ 0.39
TNFRSF1B-204ENST00000536782 ETV2O00321 342 aaPredicted RBP17.46■□□□□ 0.39
TNFRSF1B-204ENST00000536782 G6PDP11413 515 aa17.46■□□□□ 0.39
TNFRSF1B-204ENST00000536782 MATN1P21941 496 aa17.46■□□□□ 0.39
TNFRSF1B-204ENST00000536782 IFFO1Q0D2I5 559 aa17.46■□□□□ 0.39
TNFRSF1B-204ENST00000536782 TNK1Q13470 666 aa17.46■□□□□ 0.39
TNFRSF1B-204ENST00000536782 PGS1Q32NB8 556 aa17.46■□□□□ 0.39
TNFRSF1B-204ENST00000536782 C3orf33Q6P1S2 294 aa17.46■□□□□ 0.39
TNFRSF1B-204ENST00000536782 Q6ZT83 130 aa17.46■□□□□ 0.39
TNFRSF1B-204ENST00000536782 BHLHA15Q7RTS1 189 aaPredicted RBP17.46■□□□□ 0.39
TNFRSF1B-204ENST00000536782 TRMT61AQ96FX7 289 aaKnown RBP17.46■□□□□ 0.39
TNFRSF1B-204ENST00000536782 MDFIQ99750 246 aa17.46■□□□□ 0.39
TNFRSF1B-204ENST00000536782 PSD2Q9BQI7 771 aa17.46■□□□□ 0.39
TNFRSF1B-204ENST00000536782 POTEKPQ9BYX7 375 aa17.46■□□□□ 0.39
TNFRSF1B-204ENST00000536782 CR1P17927 2039 aa17.46■□□□□ 0.39
TNFRSF1B-204ENST00000536782 STAB1Q9NY15 2570 aa17.45■□□□□ 0.38
TNFRSF1B-204ENST00000536782 CHD3Q12873 2000 aaKnown RBP17.45■□□□□ 0.38
TNFRSF1B-204ENST00000536782 OVOL3O00110 214 aa17.45■□□□□ 0.38
TNFRSF1B-204ENST00000536782 STX11O75558 287 aa17.45■□□□□ 0.38
TNFRSF1B-204ENST00000536782 AK1P00568 194 aa17.45■□□□□ 0.38
TNFRSF1B-204ENST00000536782 DANCRP0C864 163 aa17.45■□□□□ 0.38
TNFRSF1B-204ENST00000536782 OR3A2P47893 321 aa17.45■□□□□ 0.38
TNFRSF1B-204ENST00000536782 C21orf58P58505 322 aa17.45■□□□□ 0.38
TNFRSF1B-204ENST00000536782 RPS26P62854 115 aaKnown RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms