RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 GTF2E2P29084 291 aaKnown RBP11.96□□□□□ -0.49
CDK5RAP3-202ENST00000536708 RORAP35398 523 aa11.96□□□□□ -0.49
CDK5RAP3-202ENST00000536708 MC2RQ01718 297 aa11.96□□□□□ -0.49
CDK5RAP3-202ENST00000536708 IL11RAQ14626 422 aa11.96□□□□□ -0.49
CDK5RAP3-202ENST00000536708 EXOSC7Q15024 291 aaKnown RBP11.96□□□□□ -0.49
CDK5RAP3-202ENST00000536708 NKAIN1Q4KMZ8 207 aa11.96□□□□□ -0.49
CDK5RAP3-202ENST00000536708 ZNF628Q5EBL2 1059 aa11.96□□□□□ -0.49
CDK5RAP3-202ENST00000536708 FAM199XQ6PEV8 388 aaPredicted RBP11.96□□□□□ -0.49
CDK5RAP3-202ENST00000536708 RAB11FIP2Q7L804 512 aa11.96□□□□□ -0.49
CDK5RAP3-202ENST00000536708 NANOGNBQ7Z5D8 188 aa11.96□□□□□ -0.49
CDK5RAP3-202ENST00000536708 OR6T1Q8NGN1 323 aa11.96□□□□□ -0.49
CDK5RAP3-202ENST00000536708 ULBP3Q9BZM4 244 aa11.96□□□□□ -0.49
CDK5RAP3-202ENST00000536708 NUAK2Q9H093 628 aa11.96□□□□□ -0.49
CDK5RAP3-202ENST00000536708 NDUFB11Q9NX14 153 aa11.96□□□□□ -0.49
CDK5RAP3-202ENST00000536708 SLC39A1Q9NY26 324 aa11.96□□□□□ -0.49
CDK5RAP3-202ENST00000536708 CLEC2DQ9UHP7 191 aa11.96□□□□□ -0.49
CDK5RAP3-202ENST00000536708 NINQ8N4C6 2090 aa11.96□□□□□ -0.49
CDK5RAP3-202ENST00000536708 CPNE3O75131 537 aaKnown RBP11.96□□□□□ -0.5
CDK5RAP3-202ENST00000536708 ATP1B1P05026 303 aa11.96□□□□□ -0.5
CDK5RAP3-202ENST00000536708 HMGN2P05204 90 aaKnown RBP11.96□□□□□ -0.5
CDK5RAP3-202ENST00000536708 NT5EP21589 574 aa11.96□□□□□ -0.5
CDK5RAP3-202ENST00000536708 PSMA1P25786 263 aaKnown RBP11.96□□□□□ -0.5
CDK5RAP3-202ENST00000536708 E2F1Q01094 437 aa11.96□□□□□ -0.5
CDK5RAP3-202ENST00000536708 STX4Q12846 297 aa11.96□□□□□ -0.5
CDK5RAP3-202ENST00000536708 C3orf38Q5JPI3 329 aa11.96□□□□□ -0.5
CDK5RAP3-202ENST00000536708 YOD1Q5VVQ6 348 aaPredicted RBP11.96□□□□□ -0.5
CDK5RAP3-202ENST00000536708 FAAH2Q6GMR7 532 aa11.96□□□□□ -0.5
CDK5RAP3-202ENST00000536708 OLIG3Q7RTU3 272 aa11.96□□□□□ -0.5
CDK5RAP3-202ENST00000536708 GLRX5Q86SX6 157 aa11.96□□□□□ -0.5
CDK5RAP3-202ENST00000536708 ZNF595Q8IYB9 648 aa11.96□□□□□ -0.5
CDK5RAP3-202ENST00000536708 SLC34A3Q8N130 599 aa11.96□□□□□ -0.5
CDK5RAP3-202ENST00000536708 ELP4Q96EB1 424 aa11.96□□□□□ -0.5
CDK5RAP3-202ENST00000536708 C16orf58Q96GQ5 468 aa11.96□□□□□ -0.5
CDK5RAP3-202ENST00000536708 ARHGDIGQ99819 225 aa11.96□□□□□ -0.5
CDK5RAP3-202ENST00000536708 ASPNQ9BXN1 380 aa11.96□□□□□ -0.5
CDK5RAP3-202ENST00000536708 ANKRD19PQ9H560 264 aa11.96□□□□□ -0.5
CDK5RAP3-202ENST00000536708 ISYNA1Q9NPH2 558 aa11.96□□□□□ -0.5
CDK5RAP3-202ENST00000536708 TVP23BQ9NYZ1 205 aa11.96□□□□□ -0.5
CDK5RAP3-202ENST00000536708 MAT2BQ9NZL9 334 aa11.96□□□□□ -0.5
CDK5RAP3-202ENST00000536708 STUB1Q9UNE7 303 aa11.96□□□□□ -0.5
CDK5RAP3-202ENST00000536708 PCDHGA1Q9Y5H4 931 aa11.96□□□□□ -0.5
CDK5RAP3-202ENST00000536708 IRGMA1A4Y4 181 aa11.95□□□□□ -0.5
CDK5RAP3-202ENST00000536708 SLC35F4A4IF30 521 aa11.95□□□□□ -0.5
CDK5RAP3-202ENST00000536708 ZNF670-ZNF695F2Z2N8 137 aa11.95□□□□□ -0.5
CDK5RAP3-202ENST00000536708 EMC8O43402 210 aa11.95□□□□□ -0.5
CDK5RAP3-202ENST00000536708 PRKYO43930 277 aa11.95□□□□□ -0.5
CDK5RAP3-202ENST00000536708 OR10H2O60403 315 aa11.95□□□□□ -0.5
CDK5RAP3-202ENST00000536708 SLC34A2O95436 690 aa11.95□□□□□ -0.5
CDK5RAP3-202ENST00000536708 HBQ1P09105 142 aa11.95□□□□□ -0.5
CDK5RAP3-202ENST00000536708 TNNI3P19429 210 aa11.95□□□□□ -0.5
CDK5RAP3-202ENST00000536708 SMSP52788 366 aa11.95□□□□□ -0.5
CDK5RAP3-202ENST00000536708 GAS1P54826 345 aa11.95□□□□□ -0.5
CDK5RAP3-202ENST00000536708 IGLV3-21P80748 117 aaPredicted RBP11.95□□□□□ -0.5
CDK5RAP3-202ENST00000536708 FOXD4Q12950 439 aaPredicted RBP11.95□□□□□ -0.5
CDK5RAP3-202ENST00000536708 GINS1Q14691 196 aa11.95□□□□□ -0.5
CDK5RAP3-202ENST00000536708 LASP1Q14847 261 aaKnown RBP11.95□□□□□ -0.5
CDK5RAP3-202ENST00000536708 PRICKLE4Q2TBC4 344 aa11.95□□□□□ -0.5
CDK5RAP3-202ENST00000536708 SYT14P1Q58G82 188 aa11.95□□□□□ -0.5
CDK5RAP3-202ENST00000536708 SPANXN2Q5MJ10 180 aa11.95□□□□□ -0.5
CDK5RAP3-202ENST00000536708 RSBN1Q5VWQ0 802 aaPredicted RBP11.95□□□□□ -0.5
CDK5RAP3-202ENST00000536708 LANCL3Q6ZV70 420 aa11.95□□□□□ -0.5
CDK5RAP3-202ENST00000536708 OR52I1Q8NGK6 324 aa11.95□□□□□ -0.5
CDK5RAP3-202ENST00000536708 GNPDA2Q8TDQ7 276 aa11.95□□□□□ -0.5
CDK5RAP3-202ENST00000536708 ADAMTS18Q8TE60 1221 aa11.95□□□□□ -0.5
CDK5RAP3-202ENST00000536708 PTCHD1Q96NR3 888 aa11.95□□□□□ -0.5
CDK5RAP3-202ENST00000536708 WDFY2Q96P53 400 aa11.95□□□□□ -0.5
CDK5RAP3-202ENST00000536708 OR1F2PQ96R84 312 aa11.95□□□□□ -0.5
CDK5RAP3-202ENST00000536708 SDHCQ99643 169 aaPredicted RBP11.95□□□□□ -0.5
CDK5RAP3-202ENST00000536708 STRADBQ9C0K7 418 aa11.95□□□□□ -0.5
CDK5RAP3-202ENST00000536708 VN1R1Q9GZP7 353 aa11.95□□□□□ -0.5
CDK5RAP3-202ENST00000536708 FGF20Q9NP95 211 aaPredicted RBP11.95□□□□□ -0.5
CDK5RAP3-202ENST00000536708 PRDM9Q9NQV7 894 aa11.95□□□□□ -0.5
CDK5RAP3-202ENST00000536708 CALML5Q9NZT1 146 aa11.95□□□□□ -0.5
CDK5RAP3-202ENST00000536708 LIPT1Q9Y234 373 aa11.95□□□□□ -0.5
CDK5RAP3-202ENST00000536708 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.94□□□□□ -0.5
CDK5RAP3-202ENST00000536708 IGKV3D-11A0A0A0MRZ8 115 aa11.94□□□□□ -0.5
CDK5RAP3-202ENST00000536708 MEN1O00255 615 aa11.94□□□□□ -0.5
CDK5RAP3-202ENST00000536708 CLDN4O14493 209 aa11.94□□□□□ -0.5
CDK5RAP3-202ENST00000536708 TLX2O43763 284 aaPredicted RBP11.94□□□□□ -0.5
CDK5RAP3-202ENST00000536708 TPST2O60704 377 aa11.94□□□□□ -0.5
CDK5RAP3-202ENST00000536708 CTNSO60931 367 aa11.94□□□□□ -0.5
CDK5RAP3-202ENST00000536708 RAB36O95755 333 aa11.94□□□□□ -0.5
CDK5RAP3-202ENST00000536708 HSD17B7P56937 341 aa11.94□□□□□ -0.5
CDK5RAP3-202ENST00000536708 COPZ1P61923 177 aa11.94□□□□□ -0.5
CDK5RAP3-202ENST00000536708 PRR5P85299 388 aa11.94□□□□□ -0.5
CDK5RAP3-202ENST00000536708 MGAT2Q10469 447 aa11.94□□□□□ -0.5
CDK5RAP3-202ENST00000536708 DUSP8Q13202 625 aa11.94□□□□□ -0.5
CDK5RAP3-202ENST00000536708 C1DQ13901 141 aaKnown RBP11.94□□□□□ -0.5
CDK5RAP3-202ENST00000536708 KLHL22Q53GT1 634 aa11.94□□□□□ -0.5
CDK5RAP3-202ENST00000536708 FHL5Q5TD97 284 aa11.94□□□□□ -0.5
CDK5RAP3-202ENST00000536708 ACSM5Q6NUN0 579 aa11.94□□□□□ -0.5
CDK5RAP3-202ENST00000536708 CCBE1Q6UXH8 406 aaPredicted RBP11.94□□□□□ -0.5
CDK5RAP3-202ENST00000536708 LILRB4Q8NHJ6 448 aa11.94□□□□□ -0.5
CDK5RAP3-202ENST00000536708 STT3BQ8TCJ2 826 aa11.94□□□□□ -0.5
CDK5RAP3-202ENST00000536708 TP53INP1Q96A56 240 aa11.94□□□□□ -0.5
CDK5RAP3-202ENST00000536708 GIMAP5Q96F15 307 aa11.94□□□□□ -0.5
CDK5RAP3-202ENST00000536708 LIN37Q96GY3 246 aaPredicted RBP11.94□□□□□ -0.5
CDK5RAP3-202ENST00000536708 ZNF582Q96NG8 517 aaPredicted RBP11.94□□□□□ -0.5
CDK5RAP3-202ENST00000536708 GPA33Q99795 319 aa11.94□□□□□ -0.5
CDK5RAP3-202ENST00000536708 POLR2J2Q9GZM3 115 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms