RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 C10orf111Q8N326 155 aa12.25□□□□□ -0.45
RPAIN-205ENST00000536255 FAM71CQ8NEG0 241 aa12.25□□□□□ -0.45
RPAIN-205ENST00000536255 BHLHE22Q8NFJ8 381 aaPredicted RBP12.25□□□□□ -0.45
RPAIN-205ENST00000536255 TMEM234Q8WY98 164 aa12.25□□□□□ -0.45
RPAIN-205ENST00000536255 ARSGQ96EG1 525 aa12.25□□□□□ -0.45
RPAIN-205ENST00000536255 REXO5Q96IC2 774 aaKnown RBP12.25□□□□□ -0.45
RPAIN-205ENST00000536255 TIMP4Q99727 224 aa12.25□□□□□ -0.45
RPAIN-205ENST00000536255 MED17Q9NVC6 651 aa12.25□□□□□ -0.45
RPAIN-205ENST00000536255 NDE1Q9NXR1 346 aa12.25□□□□□ -0.45
RPAIN-205ENST00000536255 COQ3Q9NZJ6 369 aa12.25□□□□□ -0.45
RPAIN-205ENST00000536255 PRDM4Q9UKN5 801 aa12.25□□□□□ -0.45
RPAIN-205ENST00000536255 VDAC3Q9Y277 283 aa12.25□□□□□ -0.45
RPAIN-205ENST00000536255 ZNF443Q9Y2A4 671 aaPredicted RBP12.25□□□□□ -0.45
RPAIN-205ENST00000536255 FAM215AQ9Y5M1 114 aa12.25□□□□□ -0.45
RPAIN-205ENST00000536255 GPC6Q9Y625 555 aaPredicted RBP12.25□□□□□ -0.45
RPAIN-205ENST00000536255 NCOA6Q14686 2063 aaPredicted RBP12.25□□□□□ -0.45
RPAIN-205ENST00000536255 DNAJC13O75165 2243 aa12.25□□□□□ -0.45
RPAIN-205ENST00000536255 C7orf72A4D263 438 aa12.24□□□□□ -0.45
RPAIN-205ENST00000536255 CYSRT1A8MQ03 144 aa12.24□□□□□ -0.45
RPAIN-205ENST00000536255 CLDN14O95500 239 aa12.24□□□□□ -0.45
RPAIN-205ENST00000536255 PABPC4LP0CB38 370 aaKnown RBP12.24□□□□□ -0.45
RPAIN-205ENST00000536255 TCEA1P23193 301 aaKnown RBP12.24□□□□□ -0.45
RPAIN-205ENST00000536255 ADH6P28332 368 aa12.24□□□□□ -0.45
RPAIN-205ENST00000536255 PCGF2P35227 344 aa12.24□□□□□ -0.45
RPAIN-205ENST00000536255 PTGER4P35408 488 aa12.24□□□□□ -0.45
RPAIN-205ENST00000536255 GFRA1P56159 465 aa12.24□□□□□ -0.45
RPAIN-205ENST00000536255 NUP107P57740 925 aa12.24□□□□□ -0.45
RPAIN-205ENST00000536255 PMPCAQ10713 525 aa12.24□□□□□ -0.45
RPAIN-205ENST00000536255 VMACQ2NL98 169 aa12.24□□□□□ -0.45
RPAIN-205ENST00000536255 PLPPR5Q32ZL2 321 aa12.24□□□□□ -0.45
RPAIN-205ENST00000536255 MRPL2Q5T653 305 aaKnown RBP12.24□□□□□ -0.45
RPAIN-205ENST00000536255 C1orf185Q5T7R7 199 aa12.24□□□□□ -0.45
RPAIN-205ENST00000536255 RTL6Q6ICC9 239 aa12.24□□□□□ -0.45
RPAIN-205ENST00000536255 HMGN2P46Q86SG4 172 aa12.24□□□□□ -0.45
RPAIN-205ENST00000536255 PATL1Q86TB9 770 aaKnown RBP12.24□□□□□ -0.45
RPAIN-205ENST00000536255 PTOV1Q86YD1 416 aa12.24□□□□□ -0.45
RPAIN-205ENST00000536255 ZZZ3Q8IYH5 903 aa12.24□□□□□ -0.45
RPAIN-205ENST00000536255 ULK2Q8IYT8 1036 aa12.24□□□□□ -0.45
RPAIN-205ENST00000536255 GTPBP8Q8N3Z3 284 aaPredicted RBP12.24□□□□□ -0.45
RPAIN-205ENST00000536255 FITM2Q8N6M3 262 aa12.24□□□□□ -0.45
RPAIN-205ENST00000536255 GPR119Q8TDV5 335 aa12.24□□□□□ -0.45
RPAIN-205ENST00000536255 RND1Q92730 232 aa12.24□□□□□ -0.45
RPAIN-205ENST00000536255 SDCCAG3Q96C92 435 aa12.24□□□□□ -0.45
RPAIN-205ENST00000536255 GPATCH1Q9BRR8 931 aaKnown RBP12.24□□□□□ -0.45
RPAIN-205ENST00000536255 TTYH2Q9BSA4 534 aa12.24□□□□□ -0.45
RPAIN-205ENST00000536255 UGT2B28Q9BY64 529 aa12.24□□□□□ -0.45
RPAIN-205ENST00000536255 PRDM14Q9GZV8 571 aa12.24□□□□□ -0.45
RPAIN-205ENST00000536255 ALKBH4Q9NXW9 302 aa12.24□□□□□ -0.45
RPAIN-205ENST00000536255 UNC79Q9P2D8 2635 aa12.23□□□□□ -0.45
RPAIN-205ENST00000536255 OR2M5A3KFT3 312 aa12.23□□□□□ -0.45
RPAIN-205ENST00000536255 CDHR4A6H8M9 788 aa12.23□□□□□ -0.45
RPAIN-205ENST00000536255 CFAP73A6NFT4 308 aa12.23□□□□□ -0.45
RPAIN-205ENST00000536255 CLDN24A6NM45 220 aa12.23□□□□□ -0.45
RPAIN-205ENST00000536255 AHRRA9YTQ3 701 aa12.23□□□□□ -0.45
RPAIN-205ENST00000536255 FAM220BPB1ANY3 271 aa12.23□□□□□ -0.45
RPAIN-205ENST00000536255 OIP5O43482 229 aa12.23□□□□□ -0.45
RPAIN-205ENST00000536255 DNAJA2O60884 412 aa12.23□□□□□ -0.45
RPAIN-205ENST00000536255 LINGO3P0C6S8 592 aa12.23□□□□□ -0.45
RPAIN-205ENST00000536255 GLI4P10075 376 aa12.23□□□□□ -0.45
RPAIN-205ENST00000536255 PEPDP12955 493 aa12.23□□□□□ -0.45
RPAIN-205ENST00000536255 POU3F2P20265 443 aaPredicted RBP12.23□□□□□ -0.45
RPAIN-205ENST00000536255 ME2P23368 584 aa12.23□□□□□ -0.45
RPAIN-205ENST00000536255 ELK4P28324 431 aa12.23□□□□□ -0.45
RPAIN-205ENST00000536255 HTR1EP28566 365 aa12.23□□□□□ -0.45
RPAIN-205ENST00000536255 CHRNB4P30926 498 aa12.23□□□□□ -0.45
RPAIN-205ENST00000536255 PRKAR1BP31321 381 aa12.23□□□□□ -0.45
RPAIN-205ENST00000536255 GZMMP51124 257 aa12.23□□□□□ -0.45
RPAIN-205ENST00000536255 VEZF1Q14119 521 aa12.23□□□□□ -0.45
RPAIN-205ENST00000536255 BCL2A1Q16548 175 aa12.23□□□□□ -0.45
RPAIN-205ENST00000536255 NDUFAF6Q330K2 333 aa12.23□□□□□ -0.45
RPAIN-205ENST00000536255 DCST1Q5T197 706 aa12.23□□□□□ -0.45
RPAIN-205ENST00000536255 ZNF836Q6ZNA1 936 aa12.23□□□□□ -0.45
RPAIN-205ENST00000536255 ZNF550Q7Z398 422 aa12.23□□□□□ -0.45
RPAIN-205ENST00000536255 CALHM3Q86XJ0 350 aa12.23□□□□□ -0.45
RPAIN-205ENST00000536255 VRK2Q86Y07 508 aa12.23□□□□□ -0.45
RPAIN-205ENST00000536255 ARMC8Q8IUR7 673 aa12.23□□□□□ -0.45
RPAIN-205ENST00000536255 GRAMD2AQ8IUY3 354 aa12.23□□□□□ -0.45
RPAIN-205ENST00000536255 OR2T12Q8NG77 320 aa12.23□□□□□ -0.45
RPAIN-205ENST00000536255 ZNF563Q8TA94 476 aa12.23□□□□□ -0.45
RPAIN-205ENST00000536255 CA5BP1Q8WTZ4 195 aa12.23□□□□□ -0.45
RPAIN-205ENST00000536255 ASB5Q8WWX0 329 aa12.23□□□□□ -0.45
RPAIN-205ENST00000536255 ST8SIA1Q92185 356 aa12.23□□□□□ -0.45
RPAIN-205ENST00000536255 SLC35B4Q969S0 331 aa12.23□□□□□ -0.45
RPAIN-205ENST00000536255 MRGPRX4Q96LA9 322 aa12.23□□□□□ -0.45
RPAIN-205ENST00000536255 PIF1Q9H611 641 aa12.23□□□□□ -0.45
RPAIN-205ENST00000536255 SPAG4Q9NPE6 437 aa12.23□□□□□ -0.45
RPAIN-205ENST00000536255 ARL8BQ9NVJ2 186 aa12.23□□□□□ -0.45
RPAIN-205ENST00000536255 DNAJB12Q9NXW2 375 aaKnown RBP12.23□□□□□ -0.45
RPAIN-205ENST00000536255 SLC13A4Q9UKG4 626 aa12.23□□□□□ -0.45
RPAIN-205ENST00000536255 CAMK2AQ9UQM7 478 aa12.23□□□□□ -0.45
RPAIN-205ENST00000536255 RNF6Q9Y252 685 aa12.23□□□□□ -0.45
RPAIN-205ENST00000536255 AP4B1Q9Y6B7 739 aa12.23□□□□□ -0.45
RPAIN-205ENST00000536255 NBPF19A0A087WUL8 3843 aa12.22□□□□□ -0.45
RPAIN-205ENST00000536255 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.22□□□□□ -0.45
RPAIN-205ENST00000536255 IFNA14P01570 189 aa12.22□□□□□ -0.45
RPAIN-205ENST00000536255 CPN1P15169 458 aa12.22□□□□□ -0.45
RPAIN-205ENST00000536255 GRNP28799 593 aaKnown RBP12.22□□□□□ -0.45
RPAIN-205ENST00000536255 AQP1P29972 269 aa12.22□□□□□ -0.45
RPAIN-205ENST00000536255 RYKP34925 604 aa12.22□□□□□ -0.45
RPAIN-205ENST00000536255 CPA2P48052 419 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms