RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 XKRXQ6PP77 449 aa12.35□□□□□ -0.43
VPS33B-202ENST00000535906 CD200R1LQ6Q8B3 271 aa12.35□□□□□ -0.43
VPS33B-202ENST00000535906 THSD4Q6ZMP0 1018 aa12.35□□□□□ -0.43
VPS33B-202ENST00000535906 C17orf82Q86X59 251 aaPredicted RBP12.35□□□□□ -0.43
VPS33B-202ENST00000535906 OTULINQ96BN8 352 aa12.35□□□□□ -0.43
VPS33B-202ENST00000535906 ZNF285Q96NJ3 590 aa12.35□□□□□ -0.43
VPS33B-202ENST00000535906 ZNF559Q9BR84 538 aa12.35□□□□□ -0.43
VPS33B-202ENST00000535906 ZNF649Q9BS31 505 aa12.35□□□□□ -0.43
VPS33B-202ENST00000535906 KATNB1Q9BVA0 655 aa12.35□□□□□ -0.43
VPS33B-202ENST00000535906 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.35□□□□□ -0.43
VPS33B-202ENST00000535906 TMEM27Q9HBJ8 222 aa12.35□□□□□ -0.43
VPS33B-202ENST00000535906 SOHLH2Q9NX45 425 aa12.35□□□□□ -0.43
VPS33B-202ENST00000535906 DNAJB12Q9NXW2 375 aaKnown RBP12.35□□□□□ -0.43
VPS33B-202ENST00000535906 GSTK1Q9Y2Q3 226 aa12.35□□□□□ -0.43
VPS33B-202ENST00000535906 SPAG17Q6Q759 2223 aa12.34□□□□□ -0.43
VPS33B-202ENST00000535906 A0A0B4J2E0 115 aa12.34□□□□□ -0.43
VPS33B-202ENST00000535906 A0A1B0GX12 115 aa12.34□□□□□ -0.43
VPS33B-202ENST00000535906 CLDN4O14493 209 aa12.34□□□□□ -0.43
VPS33B-202ENST00000535906 LALBAP00709 142 aa12.34□□□□□ -0.43
VPS33B-202ENST00000535906 AZGP1P25311 298 aaKnown RBP12.34□□□□□ -0.43
VPS33B-202ENST00000535906 HTR1FP30939 366 aa12.34□□□□□ -0.43
VPS33B-202ENST00000535906 RFX2P48378 723 aa12.34□□□□□ -0.43
VPS33B-202ENST00000535906 FNTBP49356 437 aa12.34□□□□□ -0.43
VPS33B-202ENST00000535906 PGDP52209 483 aa12.34□□□□□ -0.43
VPS33B-202ENST00000535906 SKP1P63208 163 aa12.34□□□□□ -0.43
VPS33B-202ENST00000535906 FABP5Q01469 135 aa12.34□□□□□ -0.43
VPS33B-202ENST00000535906 RPL6Q02878 288 aaKnown RBP12.34□□□□□ -0.43
VPS33B-202ENST00000535906 SMAD2Q15796 467 aaKnown RBP12.34□□□□□ -0.43
VPS33B-202ENST00000535906 DDI2Q5TDH0 399 aa12.34□□□□□ -0.43
VPS33B-202ENST00000535906 ZNF544Q6NX49 715 aa12.34□□□□□ -0.43
VPS33B-202ENST00000535906 PLBD1Q6P4A8 553 aa12.34□□□□□ -0.43
VPS33B-202ENST00000535906 ZNF613Q6PF04 617 aa12.34□□□□□ -0.43
VPS33B-202ENST00000535906 FAM131AQ6UXB0 335 aa12.34□□□□□ -0.43
VPS33B-202ENST00000535906 CHRDL2Q6WN34 429 aa12.34□□□□□ -0.43
VPS33B-202ENST00000535906 TMPRSS11FQ6ZWK6 438 aa12.34□□□□□ -0.43
VPS33B-202ENST00000535906 CXXC5Q7LFL8 322 aaKnown RBP12.34□□□□□ -0.43
VPS33B-202ENST00000535906 GRAMD2AQ8IUY3 354 aa12.34□□□□□ -0.43
VPS33B-202ENST00000535906 UBQLNLQ8IYU4 475 aa12.34□□□□□ -0.43
VPS33B-202ENST00000535906 ZFP41Q8N8Y5 198 aa12.34□□□□□ -0.43
VPS33B-202ENST00000535906 OR13C2Q8NGS9 318 aa12.34□□□□□ -0.43
VPS33B-202ENST00000535906 DGAT2Q96PD7 388 aa12.34□□□□□ -0.43
VPS33B-202ENST00000535906 TM9SF2Q99805 663 aa12.34□□□□□ -0.43
VPS33B-202ENST00000535906 CTRCQ99895 268 aa12.34□□□□□ -0.43
VPS33B-202ENST00000535906 SPRTNQ9H040 489 aaPredicted RBP12.34□□□□□ -0.43
VPS33B-202ENST00000535906 CHRDQ9H2X0 955 aa12.34□□□□□ -0.43
VPS33B-202ENST00000535906 MED20Q9H944 212 aa12.34□□□□□ -0.43
VPS33B-202ENST00000535906 TIGARQ9NQ88 270 aa12.34□□□□□ -0.43
VPS33B-202ENST00000535906 UCKL1Q9NWZ5 548 aa12.34□□□□□ -0.43
VPS33B-202ENST00000535906 TOR4AQ9NXH8 423 aa12.34□□□□□ -0.43
VPS33B-202ENST00000535906 PLCL2Q9UPR0 1127 aa12.34□□□□□ -0.43
VPS33B-202ENST00000535906 ERVK-19Q9WJR5 959 aa12.34□□□□□ -0.43
VPS33B-202ENST00000535906 SIGLEC7Q9Y286 467 aa12.34□□□□□ -0.43
VPS33B-202ENST00000535906 EXOGQ9Y2C4 368 aaKnown RBP12.34□□□□□ -0.43
VPS33B-202ENST00000535906 MED31Q9Y3C7 131 aa12.34□□□□□ -0.43
VPS33B-202ENST00000535906 A0A1B0GWA3 101 aa12.33□□□□□ -0.43
VPS33B-202ENST00000535906 A0A1W2PQ09 198 aa12.33□□□□□ -0.43
VPS33B-202ENST00000535906 SYNDIG1LA6NDD5 238 aa12.33□□□□□ -0.43
VPS33B-202ENST00000535906 CCNKO75909 580 aa12.33□□□□□ -0.43
VPS33B-202ENST00000535906 SOX30O94993 753 aa12.33□□□□□ -0.43
VPS33B-202ENST00000535906 CT45A8P0DMV1 189 aa12.33□□□□□ -0.43
VPS33B-202ENST00000535906 CT45A9P0DMV2 189 aa12.33□□□□□ -0.43
VPS33B-202ENST00000535906 SAGP10523 405 aaPredicted RBP12.33□□□□□ -0.43
VPS33B-202ENST00000535906 BMP7P18075 431 aa12.33□□□□□ -0.43
VPS33B-202ENST00000535906 HTR3AP46098 478 aa12.33□□□□□ -0.43
VPS33B-202ENST00000535906 SCN1BQ07699 218 aa12.33□□□□□ -0.43
VPS33B-202ENST00000535906 DSG2Q14126 1118 aa12.33□□□□□ -0.43
VPS33B-202ENST00000535906 CT45A2Q5DJT8 189 aa12.33□□□□□ -0.43
VPS33B-202ENST00000535906 SYT14Q8NB59 555 aa12.33□□□□□ -0.43
VPS33B-202ENST00000535906 OR6C4Q8NGE1 309 aa12.33□□□□□ -0.43
VPS33B-202ENST00000535906 OR52L1Q8NGH7 329 aa12.33□□□□□ -0.43
VPS33B-202ENST00000535906 OR51Q1Q8NH59 317 aa12.33□□□□□ -0.43
VPS33B-202ENST00000535906 C16orf52Q8NHV5 167 aa12.33□□□□□ -0.43
VPS33B-202ENST00000535906 AP3S1Q92572 193 aa12.33□□□□□ -0.43
VPS33B-202ENST00000535906 NEDD4LQ96PU5 975 aa12.33□□□□□ -0.43
VPS33B-202ENST00000535906 MOV10Q9HCE1 1003 aaKnown RBP12.33□□□□□ -0.43
VPS33B-202ENST00000535906 C14orf105Q9NVL8 296 aa12.33□□□□□ -0.43
VPS33B-202ENST00000535906 H2AFY2Q9P0M6 372 aaPredicted RBP12.33□□□□□ -0.43
VPS33B-202ENST00000535906 FBXL21Q9UKT6 434 aa12.33□□□□□ -0.43
VPS33B-202ENST00000535906 TRAV27A0A087WT01 109 aa12.33□□□□□ -0.44
VPS33B-202ENST00000535906 TRDV1A0A1B0GX56 115 aa12.33□□□□□ -0.44
VPS33B-202ENST00000535906 ZC3H12DA2A288 527 aaKnown RBP12.33□□□□□ -0.44
VPS33B-202ENST00000535906 FABP12A6NFH5 140 aa12.33□□□□□ -0.44
VPS33B-202ENST00000535906 CHP2O43745 196 aa12.33□□□□□ -0.44
VPS33B-202ENST00000535906 IGHA1P01876 353 aa12.33□□□□□ -0.44
VPS33B-202ENST00000535906 NGFRP08138 427 aa12.33□□□□□ -0.44
VPS33B-202ENST00000535906 KCNAB1Q14722 419 aa12.33□□□□□ -0.44
VPS33B-202ENST00000535906 BCL2A1Q16548 175 aa12.33□□□□□ -0.44
VPS33B-202ENST00000535906 COL13A1Q5TAT6 717 aaPredicted RBP12.33□□□□□ -0.44
VPS33B-202ENST00000535906 GARNL3Q5VVW2 1013 aa12.33□□□□□ -0.44
VPS33B-202ENST00000535906 ZNF517Q6ZMY9 492 aaPredicted RBP12.33□□□□□ -0.44
VPS33B-202ENST00000535906 BMP8AQ7Z5Y6 402 aa12.33□□□□□ -0.44
VPS33B-202ENST00000535906 CDK20Q8IZL9 346 aa12.33□□□□□ -0.44
VPS33B-202ENST00000535906 LNX2Q8N448 690 aa12.33□□□□□ -0.44
VPS33B-202ENST00000535906 SIRT6Q8N6T7 355 aa12.33□□□□□ -0.44
VPS33B-202ENST00000535906 GDPD1Q8N9F7 314 aa12.33□□□□□ -0.44
VPS33B-202ENST00000535906 CADM4Q8NFZ8 388 aa12.33□□□□□ -0.44
VPS33B-202ENST00000535906 NACC2Q96BF6 587 aa12.33□□□□□ -0.44
VPS33B-202ENST00000535906 DIRAS2Q96HU8 199 aa12.33□□□□□ -0.44
VPS33B-202ENST00000535906 HSPA12BQ96MM6 686 aa12.33□□□□□ -0.44
VPS33B-202ENST00000535906 SECISBP2Q96T21 854 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms