RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 MECRQ9BV79 373 aa7.74□□□□□ -1.17
SFSWAP-202ENST00000535202 DSN1Q9H410 356 aa7.74□□□□□ -1.17
SFSWAP-202ENST00000535202 TUBB1Q9H4B7 451 aa7.74□□□□□ -1.17
SFSWAP-202ENST00000535202 REEP4Q9H6H4 257 aa7.74□□□□□ -1.17
SFSWAP-202ENST00000535202 HMG20AQ9NP66 347 aa7.74□□□□□ -1.17
SFSWAP-202ENST00000535202 MRGBPQ9NV56 204 aa7.74□□□□□ -1.17
SFSWAP-202ENST00000535202 DNAJB12Q9NXW2 375 aaKnown RBP7.74□□□□□ -1.17
SFSWAP-202ENST00000535202 SH3BP4Q9P0V3 963 aa7.74□□□□□ -1.17
SFSWAP-202ENST00000535202 ARMCX1Q9P291 453 aa7.74□□□□□ -1.17
SFSWAP-202ENST00000535202 SLC17A7Q9P2U7 560 aa7.74□□□□□ -1.17
SFSWAP-202ENST00000535202 MRTO4Q9UKD2 239 aaKnown RBP7.74□□□□□ -1.17
SFSWAP-202ENST00000535202 ABCG2Q9UNQ0 655 aa7.74□□□□□ -1.17
SFSWAP-202ENST00000535202 RABL2BQ9UNT1 228 aa7.74□□□□□ -1.17
SFSWAP-202ENST00000535202 LRBAP50851 2863 aa7.74□□□□□ -1.17
SFSWAP-202ENST00000535202 CSMD2Q7Z408 3487 aa7.74□□□□□ -1.17
SFSWAP-202ENST00000535202 PDZD2O15018 2839 aa7.74□□□□□ -1.17
SFSWAP-202ENST00000535202 AKAP9Q99996 3911 aa7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 GXYLT2A0PJZ3 443 aa7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 ISPDA4D126 451 aa7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 EVPLLA8MZ36 301 aa7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 NPIPB8E9PQR5 432 aa7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 H3BMQ9 156 aa7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 GMFGO60234 142 aa7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 FADS1O60427 444 aa7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 NPHS1O60500 1241 aa7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 CLPXO76031 633 aa7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 ALX3O95076 343 aa7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 IL33O95760 270 aa7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 IL18BPO95998 194 aa7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 PRPS2P11908 318 aa7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 ZNF708P17019 499 aa7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 ZNF26P17031 533 aaPredicted RBP7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 BGNP21810 368 aa7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 GABRA3P34903 492 aa7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 CPA2P48052 419 aa7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 CLK3P49761 638 aaKnown RBP7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 PRKAG1P54619 331 aa7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 PSMD4P55036 377 aaKnown RBP7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 DSCR4P56555 118 aaPredicted RBP7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 CLDN18P56856 261 aa7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 RIPPLY1Q0D2K3 151 aa7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 FOXF2Q12947 444 aa7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 SELPLGQ14242 412 aa7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 LRRC36Q1X8D7 754 aa7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 FBXL19-AS1Q494R0 122 aa7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 FLYWCH1Q4VC44 716 aa7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 RFTN2Q52LD8 501 aaPredicted RBP7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 C6orf183Q5T699 404 aa7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 RAET1LQ5VY80 246 aa7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 RNF165Q6ZSG1 346 aa7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 ZCCHC23Q6ZST2 131 aa7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 CHMP1BQ7LBR1 199 aa7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 P4HA3Q7Z4N8 544 aa7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 MARCH3Q86UD3 253 aa7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 GRAMD2AQ8IUY3 354 aa7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 UBQLNLQ8IYU4 475 aa7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 GCNT2Q8N0V5 402 aa7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 POU5F2Q8N7G0 328 aa7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 FADS6Q8N9I5 356 aa7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 OR2M3Q8NG83 312 aa7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 OR5M1Q8NGP8 315 aa7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 FBXO30Q8TB52 745 aa7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 SUN5Q8TC36 379 aa7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 GIMAP1Q8WWP7 306 aa7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 PIK3R3Q92569 461 aa7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 TRIM63Q969Q1 353 aa7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 INTS12Q96CB8 462 aaKnown RBP7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 FCRL1Q96LA6 429 aa7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 COG8Q96MW5 612 aa7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 ALPK1Q96QP1 1244 aa7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 TM9SF2Q99805 663 aa7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 POLDIP3Q9BY77 421 aaKnown RBP7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 TBL1XR1Q9BZK7 514 aa7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 SP140LQ9H930 580 aa7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 C3orf14Q9HBI5 128 aa7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 EML4Q9HC35 981 aaKnown RBP7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 SDHAF3Q9NRP4 125 aa7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 MED11Q9P086 117 aa7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 FOXD3Q9UJU5 478 aaPredicted RBP7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 DNAJC15Q9Y5T4 150 aa7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 ADGRG4Q8IZF6 3080 aa7.73□□□□□ -1.17
SFSWAP-202ENST00000535202 MED12LQ86YW9 2145 aa7.72□□□□□ -1.17
SFSWAP-202ENST00000535202 TUBAL3A6NHL2 446 aa7.72□□□□□ -1.17
SFSWAP-202ENST00000535202 CLDN25C9JDP6 229 aa7.72□□□□□ -1.17
SFSWAP-202ENST00000535202 H3BML4 177 aa7.72□□□□□ -1.17
SFSWAP-202ENST00000535202 PIP5K1BO14986 540 aa7.72□□□□□ -1.17
SFSWAP-202ENST00000535202 CLOCKO15516 846 aa7.72□□□□□ -1.17
SFSWAP-202ENST00000535202 SEC14L5O43304 696 aa7.72□□□□□ -1.17
SFSWAP-202ENST00000535202 ZIC3O60481 467 aa7.72□□□□□ -1.17
SFSWAP-202ENST00000535202 CTAG2O75638 210 aa7.72□□□□□ -1.17
SFSWAP-202ENST00000535202 RCBTB2O95199 551 aa7.72□□□□□ -1.17
SFSWAP-202ENST00000535202 KCNH1O95259 989 aa7.72□□□□□ -1.17
SFSWAP-202ENST00000535202 UTS2O95399 124 aa7.72□□□□□ -1.17
SFSWAP-202ENST00000535202 IGKV1D-16P01601 117 aa7.72□□□□□ -1.17
SFSWAP-202ENST00000535202 IFI6P09912 130 aa7.72□□□□□ -1.17
SFSWAP-202ENST00000535202 PEPDP12955 493 aa7.72□□□□□ -1.17
SFSWAP-202ENST00000535202 EFNA1P20827 205 aaPredicted RBP7.72□□□□□ -1.17
SFSWAP-202ENST00000535202 MYF6P23409 242 aa7.72□□□□□ -1.17
SFSWAP-202ENST00000535202 CHMP24386 653 aa7.72□□□□□ -1.17
SFSWAP-202ENST00000535202 DNAJA1P31689 397 aaKnown RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms