RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 DNAJA3Q96EY1 480 aa12.65□□□□□ -0.38
VPS11-205ENST00000534551 ZNF845Q96IR2 970 aaPredicted RBP12.65□□□□□ -0.38
VPS11-205ENST00000534551 TRIB1Q96RU8 372 aa12.65□□□□□ -0.38
VPS11-205ENST00000534551 VKORC1Q9BQB6 163 aa12.65□□□□□ -0.38
VPS11-205ENST00000534551 MTHFD2LQ9H903 347 aaPredicted RBP12.65□□□□□ -0.38
VPS11-205ENST00000534551 BCL2L10Q9HD36 194 aa12.65□□□□□ -0.38
VPS11-205ENST00000534551 ARL8BQ9NVJ2 186 aa12.65□□□□□ -0.38
VPS11-205ENST00000534551 CALML5Q9NZT1 146 aa12.65□□□□□ -0.38
VPS11-205ENST00000534551 MRPS18CQ9Y3D5 142 aaKnown RBP12.65□□□□□ -0.38
VPS11-205ENST00000534551 HCFC1P51610 2035 aa12.64□□□□□ -0.39
VPS11-205ENST00000534551 A0A0G2JPF8 293 aa12.64□□□□□ -0.39
VPS11-205ENST00000534551 CDHR4A6H8M9 788 aa12.64□□□□□ -0.39
VPS11-205ENST00000534551 TMEM247A6NEH6 219 aa12.64□□□□□ -0.39
VPS11-205ENST00000534551 CLCA1A8K7I4 914 aa12.64□□□□□ -0.39
VPS11-205ENST00000534551 HNRNPCL2B2RXH8 293 aa12.64□□□□□ -0.39
VPS11-205ENST00000534551 HNRNPCL3B7ZW38 293 aa12.64□□□□□ -0.39
VPS11-205ENST00000534551 EFNA2O43921 213 aa12.64□□□□□ -0.39
VPS11-205ENST00000534551 TPST1O60507 370 aa12.64□□□□□ -0.39
VPS11-205ENST00000534551 EIF4E2O60573 245 aaKnown RBP12.64□□□□□ -0.39
VPS11-205ENST00000534551 HNRNPCL1O60812 293 aaKnown RBP12.64□□□□□ -0.39
VPS11-205ENST00000534551 WDR1O75083 606 aa12.64□□□□□ -0.39
VPS11-205ENST00000534551 GCM2O75603 506 aaPredicted RBP12.64□□□□□ -0.39
VPS11-205ENST00000534551 NTN1O95631 604 aa12.64□□□□□ -0.39
VPS11-205ENST00000534551 PABPC4LP0CB38 370 aaKnown RBP12.64□□□□□ -0.39
VPS11-205ENST00000534551 HNRNPCL4P0DMR1 293 aa12.64□□□□□ -0.39
VPS11-205ENST00000534551 PCGF2P35227 344 aa12.64□□□□□ -0.39
VPS11-205ENST00000534551 SFTPDP35247 375 aa12.64□□□□□ -0.39
VPS11-205ENST00000534551 GCKP35557 465 aa12.64□□□□□ -0.39
VPS11-205ENST00000534551 SESN3P58005 492 aa12.64□□□□□ -0.39
VPS11-205ENST00000534551 HOXC5Q00444 222 aa12.64□□□□□ -0.39
VPS11-205ENST00000534551 PMPCAQ10713 525 aa12.64□□□□□ -0.39
VPS11-205ENST00000534551 AP1ARQ63HQ0 302 aa12.64□□□□□ -0.39
VPS11-205ENST00000534551 REEP3Q6NUK4 255 aa12.64□□□□□ -0.39
VPS11-205ENST00000534551 ENPP6Q6UWR7 440 aa12.64□□□□□ -0.39
VPS11-205ENST00000534551 B3GNT6Q6ZMB0 384 aa12.64□□□□□ -0.39
VPS11-205ENST00000534551 SERPINA11Q86U17 422 aa12.64□□□□□ -0.39
VPS11-205ENST00000534551 CALHM3Q86XJ0 350 aa12.64□□□□□ -0.39
VPS11-205ENST00000534551 CCDC71Q8IV32 467 aaPredicted RBP12.64□□□□□ -0.39
VPS11-205ENST00000534551 PCYOX1LQ8NBM8 494 aa12.64□□□□□ -0.39
VPS11-205ENST00000534551 C11orf65Q8NCR3 313 aa12.64□□□□□ -0.39
VPS11-205ENST00000534551 NAXEQ8NCW5 288 aa12.64□□□□□ -0.39
VPS11-205ENST00000534551 ATP6V1C2Q8NEY4 427 aa12.64□□□□□ -0.39
VPS11-205ENST00000534551 TOR1AIP2Q8NFQ8 470 aa12.64□□□□□ -0.39
VPS11-205ENST00000534551 OR8J3Q8NGG0 315 aa12.64□□□□□ -0.39
VPS11-205ENST00000534551 ZBTB8AQ96BR9 441 aa12.64□□□□□ -0.39
VPS11-205ENST00000534551 WFDC6Q9BQY6 131 aa12.64□□□□□ -0.39
VPS11-205ENST00000534551 PIGQQ9BRB3 760 aa12.64□□□□□ -0.39
VPS11-205ENST00000534551 CMTM6Q9NX76 183 aa12.64□□□□□ -0.39
VPS11-205ENST00000534551 THUMPD1Q9NXG2 353 aaKnown RBP12.64□□□□□ -0.39
VPS11-205ENST00000534551 PACSIN3Q9UKS6 424 aa12.64□□□□□ -0.39
VPS11-205ENST00000534551 ANGPT4Q9Y264 503 aa12.64□□□□□ -0.39
VPS11-205ENST00000534551 GPC6Q9Y625 555 aaPredicted RBP12.64□□□□□ -0.39
VPS11-205ENST00000534551 A0A087WZY1 265 aa12.63□□□□□ -0.39
VPS11-205ENST00000534551 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.63□□□□□ -0.39
VPS11-205ENST00000534551 C7orf72A4D263 438 aa12.63□□□□□ -0.39
VPS11-205ENST00000534551 NME4O00746 187 aa12.63□□□□□ -0.39
VPS11-205ENST00000534551 TNFSF11O14788 317 aa12.63□□□□□ -0.39
VPS11-205ENST00000534551 TOXO94900 526 aa12.63□□□□□ -0.39
VPS11-205ENST00000534551 CLDN1O95832 211 aa12.63□□□□□ -0.39
VPS11-205ENST00000534551 THBS1P07996 1170 aa12.63□□□□□ -0.39
VPS11-205ENST00000534551 SLC7A2P52569 658 aa12.63□□□□□ -0.39
VPS11-205ENST00000534551 CRYBA2P53672 197 aa12.63□□□□□ -0.39
VPS11-205ENST00000534551 PCBP3P57721 371 aaKnown RBP12.63□□□□□ -0.39
VPS11-205ENST00000534551 DMTNQ08495 405 aa12.63□□□□□ -0.39
VPS11-205ENST00000534551 CTU2Q2VPK5 515 aaKnown RBP12.63□□□□□ -0.39
VPS11-205ENST00000534551 ZNF311Q5JNZ3 666 aa12.63□□□□□ -0.39
VPS11-205ENST00000534551 RNF220Q5VTB9 566 aa12.63□□□□□ -0.39
VPS11-205ENST00000534551 HIST2H2BCQ6DN03 193 aa12.63□□□□□ -0.39
VPS11-205ENST00000534551 C8orf82Q6P1X6 216 aaPredicted RBP12.63□□□□□ -0.39
VPS11-205ENST00000534551 C9orf106Q8NAJ2 232 aa12.63□□□□□ -0.39
VPS11-205ENST00000534551 SMYD1Q8NB12 490 aa12.63□□□□□ -0.39
VPS11-205ENST00000534551 HIPK4Q8NE63 616 aa12.63□□□□□ -0.39
VPS11-205ENST00000534551 TNIP2Q8NFZ5 429 aa12.63□□□□□ -0.39
VPS11-205ENST00000534551 TAMM41Q96BW9 452 aa12.63□□□□□ -0.39
VPS11-205ENST00000534551 DTNBP1Q96EV8 351 aa12.63□□□□□ -0.39
VPS11-205ENST00000534551 GPATCH1Q9BRR8 931 aaKnown RBP12.63□□□□□ -0.39
VPS11-205ENST00000534551 TTYH2Q9BSA4 534 aa12.63□□□□□ -0.39
VPS11-205ENST00000534551 EXOSC3Q9NQT5 275 aaKnown RBP12.63□□□□□ -0.39
VPS11-205ENST00000534551 GID8Q9NWU2 228 aa12.63□□□□□ -0.39
VPS11-205ENST00000534551 CLCF1Q9UBD9 225 aa12.63□□□□□ -0.39
VPS11-205ENST00000534551 ADGRG4Q8IZF6 3080 aa12.62□□□□□ -0.39
VPS11-205ENST00000534551 A0A0G2JNJ9 132 aa12.62□□□□□ -0.39
VPS11-205ENST00000534551 WIPF3A6NGB9 483 aa12.62□□□□□ -0.39
VPS11-205ENST00000534551 FAM90A27PA6NNH2 459 aa12.62□□□□□ -0.39
VPS11-205ENST00000534551 FAM220BPB1ANY3 271 aa12.62□□□□□ -0.39
VPS11-205ENST00000534551 EIF1AYO14602 144 aaKnown RBP12.62□□□□□ -0.39
VPS11-205ENST00000534551 DNAJA2O60884 412 aa12.62□□□□□ -0.39
VPS11-205ENST00000534551 GABRA1P14867 456 aa12.62□□□□□ -0.39
VPS11-205ENST00000534551 ETS2P15036 469 aa12.62□□□□□ -0.39
VPS11-205ENST00000534551 CPN1P15169 458 aa12.62□□□□□ -0.39
VPS11-205ENST00000534551 KLK2P20151 261 aa12.62□□□□□ -0.39
VPS11-205ENST00000534551 IDH2P48735 452 aaKnown RBP12.62□□□□□ -0.39
VPS11-205ENST00000534551 PER3P56645 1201 aa12.62□□□□□ -0.39
VPS11-205ENST00000534551 EPS8Q12929 822 aa12.62□□□□□ -0.39
VPS11-205ENST00000534551 GNA13Q14344 377 aa12.62□□□□□ -0.39
VPS11-205ENST00000534551 LARS2Q15031 903 aaKnown RBP12.62□□□□□ -0.39
VPS11-205ENST00000534551 VMACQ2NL98 169 aa12.62□□□□□ -0.39
VPS11-205ENST00000534551 GKAP1Q5VSY0 366 aaPredicted RBP12.62□□□□□ -0.39
VPS11-205ENST00000534551 PRAMEF8Q5VWM4 474 aa12.62□□□□□ -0.39
VPS11-205ENST00000534551 PRAMEF7Q5VXH5 474 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms