RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	MAGEA12	P43365	314 aa		14.7	□□□□□ -0.06
NCAPD3-213	ENST00000534532	TSFM	P43897	325 aa	Known RBP	14.7	□□□□□ -0.06
NCAPD3-213	ENST00000534532	AIMP2	Q13155	320 aa	Known RBP	14.7	□□□□□ -0.06
NCAPD3-213	ENST00000534532	ZNF423	Q2M1K9	1284 aa		14.7	□□□□□ -0.06
NCAPD3-213	ENST00000534532	DTWD1	Q8N5C7	304 aa		14.7	□□□□□ -0.06
NCAPD3-213	ENST00000534532	THOC3	Q96J01	351 aa	Known RBP	14.7	□□□□□ -0.06
NCAPD3-213	ENST00000534532	ELF4	Q99607	663 aa	Predicted RBP	14.7	□□□□□ -0.06
NCAPD3-213	ENST00000534532	SLC6A20	Q9NP91	592 aa		14.7	□□□□□ -0.06
NCAPD3-213	ENST00000534532	MBNL1	Q9NR56	388 aa	Known RBP	14.7	□□□□□ -0.06
NCAPD3-213	ENST00000534532	TEX10	Q9NXF1	929 aa	Predicted RBP	14.7	□□□□□ -0.06
NCAPD3-213	ENST00000534532	VAPA	Q9P0L0	249 aa		14.7	□□□□□ -0.06
NCAPD3-213	ENST00000534532	FAM230A	A0A1W2PPH8	454 aa		14.7	□□□□□ -0.06
NCAPD3-213	ENST00000534532	EIF1B	O60739	113 aa	Known RBP	14.7	□□□□□ -0.06
NCAPD3-213	ENST00000534532	MSL3P1	P0C860	447 aa		14.7	□□□□□ -0.06
NCAPD3-213	ENST00000534532	BMP1	P13497	986 aa		14.7	□□□□□ -0.06
NCAPD3-213	ENST00000534532	UQCRC1	P31930	480 aa		14.7	□□□□□ -0.06
NCAPD3-213	ENST00000534532	NOVA1	P51513	510 aa	Known RBP	14.7	□□□□□ -0.06
NCAPD3-213	ENST00000534532	MRPL58	Q14197	206 aa	Known RBP	14.7	□□□□□ -0.06
NCAPD3-213	ENST00000534532	ENTPD8	Q5MY95	495 aa		14.7	□□□□□ -0.06
NCAPD3-213	ENST00000534532	OGFRL1	Q5TC84	451 aa	Predicted RBP	14.7	□□□□□ -0.06
NCAPD3-213	ENST00000534532	FAM160A2	Q8N612	972 aa	Predicted RBP	14.7	□□□□□ -0.06
NCAPD3-213	ENST00000534532	LRRC20	Q8TCA0	184 aa		14.7	□□□□□ -0.06
NCAPD3-213	ENST00000534532	SGCZ	Q96LD1	299 aa		14.7	□□□□□ -0.06
NCAPD3-213	ENST00000534532	ALG8	Q9BVK2	526 aa		14.7	□□□□□ -0.06
NCAPD3-213	ENST00000534532	MPIG6B	O95866	241 aa		14.7	□□□□□ -0.06
NCAPD3-213	ENST00000534532	MAN2A2	P49641	1150 aa		14.7	□□□□□ -0.06
NCAPD3-213	ENST00000534532	CARD18	P57730	90 aa		14.7	□□□□□ -0.06
NCAPD3-213	ENST00000534532	HOXC5	Q00444	222 aa		14.7	□□□□□ -0.06
NCAPD3-213	ENST00000534532	IL10RA	Q13651	578 aa		14.7	□□□□□ -0.06
NCAPD3-213	ENST00000534532	VRK2	Q86Y07	508 aa		14.7	□□□□□ -0.06
NCAPD3-213	ENST00000534532	CMTM1	Q8IZ96	169 aa		14.7	□□□□□ -0.06
NCAPD3-213	ENST00000534532	CCDC71L	Q8N9Z2	235 aa		14.7	□□□□□ -0.06
NCAPD3-213	ENST00000534532	BEX2	Q9BXY8	128 aa		14.7	□□□□□ -0.06
NCAPD3-213	ENST00000534532	CLMP	Q9H6B4	373 aa		14.7	□□□□□ -0.06
NCAPD3-213	ENST00000534532	BEX1	Q9HBH7	125 aa		14.7	□□□□□ -0.06
NCAPD3-213	ENST00000534532	CSNK1G3	Q9Y6M4	447 aa		14.7	□□□□□ -0.06
NCAPD3-213	ENST00000534532	CIT	O14578	2027 aa		14.7	□□□□□ -0.06
NCAPD3-213	ENST00000534532	PCDH17	O14917	1159 aa		14.7	□□□□□ -0.06
NCAPD3-213	ENST00000534532	SUSD5	O60279	629 aa		14.7	□□□□□ -0.06
NCAPD3-213	ENST00000534532	CD97	P48960	835 aa		14.7	□□□□□ -0.06
NCAPD3-213	ENST00000534532	ATP1B3	P54709	279 aa		14.7	□□□□□ -0.06
NCAPD3-213	ENST00000534532	PDE7A	Q13946	482 aa		14.7	□□□□□ -0.06
NCAPD3-213	ENST00000534532	OR5D14	Q8NGL3	314 aa		14.7	□□□□□ -0.06
NCAPD3-213	ENST00000534532	OR6C70	A6NIJ9	312 aa		14.69	□□□□□ -0.06
NCAPD3-213	ENST00000534532		G3V3Y1	287 aa		14.69	□□□□□ -0.06
NCAPD3-213	ENST00000534532	ENPP1	P22413	925 aa		14.69	□□□□□ -0.06
NCAPD3-213	ENST00000534532	TMBIM6	P55061	237 aa		14.69	□□□□□ -0.06
NCAPD3-213	ENST00000534532	RSPO2	Q6UXX9	243 aa	Predicted RBP	14.69	□□□□□ -0.06
NCAPD3-213	ENST00000534532	BPHL	Q86WA6	291 aa	Predicted RBP	14.69	□□□□□ -0.06
NCAPD3-213	ENST00000534532	COQ8A	Q8NI60	647 aa		14.69	□□□□□ -0.06
NCAPD3-213	ENST00000534532	CHPT1	Q8WUD6	406 aa		14.69	□□□□□ -0.06
NCAPD3-213	ENST00000534532	VN1R3	Q9BXE9	311 aa		14.69	□□□□□ -0.06
NCAPD3-213	ENST00000534532	MS4A8	Q9BY19	250 aa		14.69	□□□□□ -0.06
NCAPD3-213	ENST00000534532	NXF5	Q9H1B4	397 aa	Known RBP	14.69	□□□□□ -0.06
NCAPD3-213	ENST00000534532	SERINC4	A6NH21	518 aa		14.69	□□□□□ -0.06
NCAPD3-213	ENST00000534532	PRRT4	C9JH25	899 aa		14.69	□□□□□ -0.06
NCAPD3-213	ENST00000534532	INMT-MINDY4	F8WBC2	141 aa		14.69	□□□□□ -0.06
NCAPD3-213	ENST00000534532	PRRG2	O14669	202 aa		14.69	□□□□□ -0.06
NCAPD3-213	ENST00000534532	GABARAPL2	P60520	117 aa		14.69	□□□□□ -0.06
NCAPD3-213	ENST00000534532	PPA1	Q15181	289 aa		14.69	□□□□□ -0.06
NCAPD3-213	ENST00000534532	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	14.69	□□□□□ -0.06
NCAPD3-213	ENST00000534532	PLCXD3	Q63HM9	321 aa		14.69	□□□□□ -0.06
NCAPD3-213	ENST00000534532	METRNL	Q641Q3	311 aa		14.69	□□□□□ -0.06
NCAPD3-213	ENST00000534532	KIAA1211L	Q6NV74	962 aa		14.69	□□□□□ -0.06
NCAPD3-213	ENST00000534532	VHLL	Q6RSH7	139 aa		14.69	□□□□□ -0.06
NCAPD3-213	ENST00000534532	LSMEM2	Q8N112	164 aa		14.69	□□□□□ -0.06
NCAPD3-213	ENST00000534532	OR8H3	Q8N146	312 aa		14.69	□□□□□ -0.06
NCAPD3-213	ENST00000534532	LMNTD1	Q8N9Z9	388 aa		14.69	□□□□□ -0.06
NCAPD3-213	ENST00000534532	ZNF566	Q969W8	418 aa		14.69	□□□□□ -0.06
NCAPD3-213	ENST00000534532	LMF1	Q96S06	567 aa		14.69	□□□□□ -0.06
NCAPD3-213	ENST00000534532	GPR83	Q9NYM4	423 aa		14.69	□□□□□ -0.06
NCAPD3-213	ENST00000534532	SLCO2B1	O94956	709 aa		14.69	□□□□□ -0.06
NCAPD3-213	ENST00000534532	SDHB	P21912	280 aa		14.69	□□□□□ -0.06
NCAPD3-213	ENST00000534532	GPX3	P22352	226 aa		14.69	□□□□□ -0.06
NCAPD3-213	ENST00000534532	ARL3	P36405	182 aa		14.69	□□□□□ -0.06
NCAPD3-213	ENST00000534532	SYPL1	Q16563	259 aa		14.69	□□□□□ -0.06
NCAPD3-213	ENST00000534532	SLC5A12	Q1EHB4	618 aa		14.69	□□□□□ -0.06
NCAPD3-213	ENST00000534532	TP53I3	Q53FA7	332 aa		14.69	□□□□□ -0.06
NCAPD3-213	ENST00000534532	PIP5KL1	Q5T9C9	394 aa		14.69	□□□□□ -0.06
NCAPD3-213	ENST00000534532	RAB12	Q6IQ22	244 aa		14.69	□□□□□ -0.06
NCAPD3-213	ENST00000534532	CSNK2A3	Q8NEV1	391 aa		14.69	□□□□□ -0.06
NCAPD3-213	ENST00000534532	UBTD2	Q8WUN7	234 aa		14.69	□□□□□ -0.06
NCAPD3-213	ENST00000534532	MRGPRX1	Q96LB2	322 aa		14.69	□□□□□ -0.06
NCAPD3-213	ENST00000534532	OR52D1	Q9H346	318 aa		14.69	□□□□□ -0.06
NCAPD3-213	ENST00000534532	DCAF13	Q9NV06	445 aa	Known RBP	14.69	□□□□□ -0.06
NCAPD3-213	ENST00000534532	B3GNT3	Q9Y2A9	372 aa		14.69	□□□□□ -0.06
NCAPD3-213	ENST00000534532	SLX4	Q8IY92	1834 aa		14.69	□□□□□ -0.06
NCAPD3-213	ENST00000534532	GLI3	P10071	1580 aa		14.69	□□□□□ -0.06
NCAPD3-213	ENST00000534532	FAM155A	B1AL88	458 aa	Predicted RBP	14.69	□□□□□ -0.06
NCAPD3-213	ENST00000534532	TARM1	B6A8C7	271 aa		14.69	□□□□□ -0.06
NCAPD3-213	ENST00000534532	CYB5B	O43169	146 aa		14.69	□□□□□ -0.06
NCAPD3-213	ENST00000534532	CAMK2D	Q13557	499 aa		14.69	□□□□□ -0.06
NCAPD3-213	ENST00000534532	MRPL2	Q5T653	305 aa	Known RBP	14.69	□□□□□ -0.06
NCAPD3-213	ENST00000534532	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	14.69	□□□□□ -0.06
NCAPD3-213	ENST00000534532	LKAAEAR1	Q8TD35	194 aa		14.69	□□□□□ -0.06
NCAPD3-213	ENST00000534532	SLC19A3	Q9BZV2	496 aa		14.69	□□□□□ -0.06
NCAPD3-213	ENST00000534532	CDCP1	Q9H5V8	836 aa		14.69	□□□□□ -0.06
NCAPD3-213	ENST00000534532	FOLH1B	Q9HBA9	442 aa		14.69	□□□□□ -0.06
NCAPD3-213	ENST00000534532	PLEKHJ1	Q9NW61	149 aa		14.69	□□□□□ -0.06
NCAPD3-213	ENST00000534532	PKD1L3	Q7Z443	1732 aa		14.69	□□□□□ -0.06

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms