RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 ARNTLO00327 626 aa13.84□□□□□ -0.19
PCDHA9-202ENST00000532602 H2AFB2P0C5Z0 115 aa13.84□□□□□ -0.19
PCDHA9-202ENST00000532602 CTHP32929 405 aa13.84□□□□□ -0.19
PCDHA9-202ENST00000532602 INHBCP55103 352 aa13.84□□□□□ -0.19
PCDHA9-202ENST00000532602 GPR18Q14330 331 aa13.84□□□□□ -0.19
PCDHA9-202ENST00000532602 MARVELD2Q8N4S9 558 aa13.84□□□□□ -0.19
PCDHA9-202ENST00000532602 ELSPBP1Q96BH3 223 aa13.84□□□□□ -0.19
PCDHA9-202ENST00000532602 SPIN2AQ99865 258 aa13.84□□□□□ -0.19
PCDHA9-202ENST00000532602 SPIN2BQ9BPZ2 258 aa13.84□□□□□ -0.19
PCDHA9-202ENST00000532602 PAPOLGQ9BWT3 736 aaKnown RBP13.84□□□□□ -0.19
PCDHA9-202ENST00000532602 ZNF181Q2M3W8 571 aa13.84□□□□□ -0.19
PCDHA9-202ENST00000532602 MISPQ8IVT2 679 aa13.84□□□□□ -0.19
PCDHA9-202ENST00000532602 CNTN4Q8IWV2 1026 aa13.84□□□□□ -0.19
PCDHA9-202ENST00000532602 LINC01599Q8WXQ3 324 aa13.84□□□□□ -0.19
PCDHA9-202ENST00000532602 BPIFA2Q96DR5 249 aa13.84□□□□□ -0.19
PCDHA9-202ENST00000532602 C6orf106Q9H6K1 298 aaPredicted RBP13.84□□□□□ -0.19
PCDHA9-202ENST00000532602 DHCR7Q9UBM7 475 aaKnown RBP13.84□□□□□ -0.19
PCDHA9-202ENST00000532602 MRPL33O75394 65 aaKnown RBP13.83□□□□□ -0.2
PCDHA9-202ENST00000532602 TMEM151AQ8N4L1 468 aa13.83□□□□□ -0.2
PCDHA9-202ENST00000532602 CDC6Q99741 560 aa13.83□□□□□ -0.2
PCDHA9-202ENST00000532602 TREX2Q9BQ50 279 aaPredicted RBP13.83□□□□□ -0.2
PCDHA9-202ENST00000532602 ZNF337Q9Y3M9 751 aa13.83□□□□□ -0.2
PCDHA9-202ENST00000532602 SERPINA5P05154 406 aa13.83□□□□□ -0.2
PCDHA9-202ENST00000532602 GPX3P22352 226 aa13.83□□□□□ -0.2
PCDHA9-202ENST00000532602 ADH6P28332 368 aa13.83□□□□□ -0.2
PCDHA9-202ENST00000532602 SQSTM1Q13501 440 aa13.83□□□□□ -0.2
PCDHA9-202ENST00000532602 RAB31Q13636 194 aa13.83□□□□□ -0.2
PCDHA9-202ENST00000532602 ADAMTSL4Q6UY14 1074 aa13.83□□□□□ -0.2
PCDHA9-202ENST00000532602 CSNK2A3Q8NEV1 391 aa13.83□□□□□ -0.2
PCDHA9-202ENST00000532602 OR51T1Q8NGJ9 327 aa13.83□□□□□ -0.2
PCDHA9-202ENST00000532602 ULBP2Q9BZM5 246 aa13.83□□□□□ -0.2
PCDHA9-202ENST00000532602 MRPL15Q9P015 296 aaKnown RBP13.83□□□□□ -0.2
PCDHA9-202ENST00000532602 MICAL3Q7RTP6 2002 aa13.83□□□□□ -0.2
PCDHA9-202ENST00000532602 A0A0G2JMP0 313 aa13.83□□□□□ -0.2
PCDHA9-202ENST00000532602 G3V3Y1 287 aa13.83□□□□□ -0.2
PCDHA9-202ENST00000532602 BMP2P12643 396 aa13.83□□□□□ -0.2
PCDHA9-202ENST00000532602 SDR9C7Q8NEX9 313 aa13.83□□□□□ -0.2
PCDHA9-202ENST00000532602 OR4M2Q8NGB6 313 aa13.83□□□□□ -0.2
PCDHA9-202ENST00000532602 NPRL2Q8WTW4 380 aa13.83□□□□□ -0.2
PCDHA9-202ENST00000532602 FAM210AQ96ND0 272 aa13.83□□□□□ -0.2
PCDHA9-202ENST00000532602 VAPAQ9P0L0 249 aa13.83□□□□□ -0.2
PCDHA9-202ENST00000532602 KLHL9Q9P2J3 617 aa13.83□□□□□ -0.2
PCDHA9-202ENST00000532602 MRPS14O60783 128 aaKnown RBP13.83□□□□□ -0.2
PCDHA9-202ENST00000532602 SLC2A5P22732 501 aa13.83□□□□□ -0.2
PCDHA9-202ENST00000532602 RPS5P46782 204 aaKnown RBP13.83□□□□□ -0.2
PCDHA9-202ENST00000532602 C3orf38Q5JPI3 329 aa13.83□□□□□ -0.2
PCDHA9-202ENST00000532602 C9orf135Q5VTT2 229 aa13.83□□□□□ -0.2
PCDHA9-202ENST00000532602 GSG1LQ6UXU4 331 aa13.83□□□□□ -0.2
PCDHA9-202ENST00000532602 PDXPQ96GD0 296 aa13.83□□□□□ -0.2
PCDHA9-202ENST00000532602 ALG8Q9BVK2 526 aa13.83□□□□□ -0.2
PCDHA9-202ENST00000532602 LOC105369274A0A096LPK9 316 aa13.82□□□□□ -0.2
PCDHA9-202ENST00000532602 CYB5BO43169 146 aa13.82□□□□□ -0.2
PCDHA9-202ENST00000532602 CRTAPO75718 401 aaPredicted RBP13.82□□□□□ -0.2
PCDHA9-202ENST00000532602 EIF2DP41214 584 aaKnown RBP13.82□□□□□ -0.2
PCDHA9-202ENST00000532602 WNT4P56705 351 aa13.82□□□□□ -0.2
PCDHA9-202ENST00000532602 COL28A1Q2UY09 1125 aa13.82□□□□□ -0.2
PCDHA9-202ENST00000532602 GDPGP1Q6ZNW5 385 aa13.82□□□□□ -0.2
PCDHA9-202ENST00000532602 OR4N4Q8N0Y3 316 aa13.82□□□□□ -0.2
PCDHA9-202ENST00000532602 CD300LFQ8TDQ1 290 aa13.82□□□□□ -0.2
PCDHA9-202ENST00000532602 ZFPM2Q8WW38 1151 aa13.82□□□□□ -0.2
PCDHA9-202ENST00000532602 ZMYND19Q96E35 227 aaPredicted RBP13.82□□□□□ -0.2
PCDHA9-202ENST00000532602 FOXQ1Q9C009 403 aa13.82□□□□□ -0.2
PCDHA9-202ENST00000532602 POLHQ9Y253 713 aa13.82□□□□□ -0.2
PCDHA9-202ENST00000532602 TMEM265A0A087WTH1 108 aa13.82□□□□□ -0.2
PCDHA9-202ENST00000532602 TSPAN4O14817 238 aa13.82□□□□□ -0.2
PCDHA9-202ENST00000532602 PRSS3P35030 304 aa13.82□□□□□ -0.2
PCDHA9-202ENST00000532602 DCTP40126 519 aa13.82□□□□□ -0.2
PCDHA9-202ENST00000532602 MAGEA3P43357 314 aa13.82□□□□□ -0.2
PCDHA9-202ENST00000532602 PROX2Q3B8N5 592 aa13.82□□□□□ -0.2
PCDHA9-202ENST00000532602 SLC6A19Q695T7 634 aa13.82□□□□□ -0.2
PCDHA9-202ENST00000532602 CENPSQ8N2Z9 138 aa13.82□□□□□ -0.2
PCDHA9-202ENST00000532602 DTWD1Q8N5C7 304 aa13.82□□□□□ -0.2
PCDHA9-202ENST00000532602 SUN5Q8TC36 379 aa13.82□□□□□ -0.2
PCDHA9-202ENST00000532602 C1QTNF2Q9BXJ5 285 aa13.82□□□□□ -0.2
PCDHA9-202ENST00000532602 ST14Q9Y5Y6 855 aa13.82□□□□□ -0.2
PCDHA9-202ENST00000532602 AIFM1O95831 613 aa13.82□□□□□ -0.2
PCDHA9-202ENST00000532602 AMY2AP04746 511 aa13.82□□□□□ -0.2
PCDHA9-202ENST00000532602 CD27P26842 260 aa13.82□□□□□ -0.2
PCDHA9-202ENST00000532602 SSR4P51571 173 aa13.82□□□□□ -0.2
PCDHA9-202ENST00000532602 SLC22A10Q63ZE4 541 aa13.82□□□□□ -0.2
PCDHA9-202ENST00000532602 TMEM178AQ8NBL3 297 aa13.82□□□□□ -0.2
PCDHA9-202ENST00000532602 NUDT22Q9BRQ3 303 aa13.82□□□□□ -0.2
PCDHA9-202ENST00000532602 POLE4Q9NR33 117 aa13.82□□□□□ -0.2
PCDHA9-202ENST00000532602 C1GALT1Q9NS00 363 aa13.82□□□□□ -0.2
PCDHA9-202ENST00000532602 TESQ9UGI8 421 aaKnown RBP13.82□□□□□ -0.2
PCDHA9-202ENST00000532602 EMC9Q9Y3B6 208 aa13.82□□□□□ -0.2
PCDHA9-202ENST00000532602 PRRT4C9JH25 899 aa13.82□□□□□ -0.2
PCDHA9-202ENST00000532602 J3KTA2 159 aa13.82□□□□□ -0.2
PCDHA9-202ENST00000532602 OR7A17O14581 309 aa13.82□□□□□ -0.2
PCDHA9-202ENST00000532602 B3GALT4O96024 378 aa13.82□□□□□ -0.2
PCDHA9-202ENST00000532602 LCKP06239 509 aa13.82□□□□□ -0.2
PCDHA9-202ENST00000532602 ZNF81P51508 661 aa13.82□□□□□ -0.2
PCDHA9-202ENST00000532602 MS4A2Q01362 244 aa13.82□□□□□ -0.2
PCDHA9-202ENST00000532602 ADIPOR2Q86V24 386 aa13.82□□□□□ -0.2
PCDHA9-202ENST00000532602 MKXQ8IYA7 352 aa13.82□□□□□ -0.2
PCDHA9-202ENST00000532602 BEST3Q8N1M1 668 aa13.82□□□□□ -0.2
PCDHA9-202ENST00000532602 ZBTB8BQ8NAP8 495 aaPredicted RBP13.82□□□□□ -0.2
PCDHA9-202ENST00000532602 ATOH8Q96SQ7 321 aa13.82□□□□□ -0.2
PCDHA9-202ENST00000532602 PADI1Q9ULC6 663 aa13.82□□□□□ -0.2
PCDHA9-202ENST00000532602 HS3ST3A1Q9Y663 406 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms