RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 ABRAXAS2Q15018 415 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 ALG11Q2TAA5 492 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 FAM46CQ5VWP2 391 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 MTFR2Q6P444 385 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 KLBQ86Z14 1044 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 CBLN2Q8IUK8 224 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 NAXDQ8IW45 347 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 CNTN4Q8IWV2 1026 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 CRIPAKQ8N1N5 446 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 STPG2Q8N412 459 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 KCTD12Q96CX2 325 aaKnown RBP6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 OCSTAMPQ9BR26 566 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 NDUFB11Q9NX14 153 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 KLHL9Q9P2J3 617 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 GHRLQ9UBU3 117 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 PCTPQ9UKL6 214 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 RUVBL1Q9Y265 456 aaKnown RBP6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 OR1A2Q9Y585 309 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 A0A1B0GV90 55 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 IGLON5A6NGN9 336 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 GPR31O00270 319 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 HSPA12AO43301 675 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 TPST2O60704 377 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 RBBP9O75884 186 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 RAB3DO95716 219 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 OLFM2O95897 454 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 CFDP00746 253 aaPredicted RBP6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 PRNPP04156 253 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 SYPP08247 313 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 NR2F1P10589 423 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 IL1RNP18510 177 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 LPOP22079 712 aaPredicted RBP6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 NTSR1P30989 418 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 DLSTP36957 453 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 PTGFRP43088 359 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 NDUFA6P56556 154 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 ERVPABLB-1P60509 514 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 E2F1Q01094 437 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 ZNF674Q2M3X9 581 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 IL20RBQ6UXL0 311 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 HTR3DQ70Z44 454 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 NRROSQ86YC3 692 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 DCAF4L2Q8NA75 395 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 POGLUT1Q8NBL1 392 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 OR14A16Q8NHC5 309 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 OVCA2Q8WZ82 227 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 PPCDCQ96CD2 204 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 VRK1Q99986 396 aaPredicted RBP6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 RIOK2Q9BVS4 552 aaKnown RBP6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 ENKD1Q9H0I2 346 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 TUBB1Q9H4B7 451 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 HHATLQ9HCP6 504 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 IL36AQ9UHA7 158 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 RCE1Q9Y256 329 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 SIT1Q9Y3P8 196 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 A0A0G2JMZ2 1700 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 SMCO3A2RU48 225 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 GGT3PA6NGU5 568 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 ZNF705GA8MUZ8 300 aaPredicted RBP6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 MANBAO00462 879 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 PPP1R2P9O14990 202 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 EIF1BO60739 113 aaKnown RBP6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 PRAMEF11O60813 436 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 POP7O75817 140 aaKnown RBP6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 IL3P08700 152 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 NMBP08949 121 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 NME1P15531 152 aaKnown RBP6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 TNFRSF1BP20333 461 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 GSTM3P21266 225 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 EIF1P41567 113 aaKnown RBP6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 MAGEB1P43366 347 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 LUMP51884 338 aaPredicted RBP6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 ART1P52961 327 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 MCCD1P59942 119 aaPredicted RBP6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 ADAM8P78325 824 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 PRR5P85299 388 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 SRSF5Q13243 272 aaKnown RBP6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 SMAD4Q13485 552 aaKnown RBP6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 VEZF1Q14119 521 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 HLXQ14774 488 aaPredicted RBP6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 C3orf38Q5JPI3 329 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 OR2G6Q5TZ20 316 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 UQCC3Q6UW78 93 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 SLC29A4Q7RTT9 530 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 SERPINA11Q86U17 422 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 SMRP1Q8NCR6 262 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 GOT1L1Q8NHS2 421 aaPredicted RBP6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 PDLIM5Q96HC4 596 aaKnown RBP6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 SHDQ96IW2 340 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 C20orf85Q9H1P6 137 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 OR2AG1Q9H205 316 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 METTL8Q9H825 291 aaKnown RBP6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 DDX31Q9H8H2 851 aaKnown RBP6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 GAR1Q9NY12 217 aaKnown RBP6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 C5orf67F2Z3F1 127 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 H7C1Q1 480 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 AGPAT2O15120 278 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 SEC14L5O43304 696 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 NIPSNAP2O75323 286 aa6.35□□□□□ -1.39
TGFBR3-209ENST00000532540 MOSPD3O75425 235 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms