RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 C6orf120Q7Z4R8 191 aa14.98□□□□□ -0.01
CPSF1-207ENST00000531727 TUSC5Q8IXB3 177 aa14.98□□□□□ -0.01
CPSF1-207ENST00000531727 CLECL1Q8IZS7 167 aa14.98□□□□□ -0.01
CPSF1-207ENST00000531727 GABRG1Q8N1C3 465 aa14.98□□□□□ -0.01
CPSF1-207ENST00000531727 CIARTQ8N365 385 aaPredicted RBP14.98□□□□□ -0.01
CPSF1-207ENST00000531727 TMCO5AQ8N6Q1 288 aa14.98□□□□□ -0.01
CPSF1-207ENST00000531727 ATP6V1C2Q8NEY4 427 aa14.98□□□□□ -0.01
CPSF1-207ENST00000531727 RFWD2Q8NHY2 731 aa14.98□□□□□ -0.01
CPSF1-207ENST00000531727 S100PBPQ96BU1 408 aa14.98□□□□□ -0.01
CPSF1-207ENST00000531727 ZNF524Q96C55 264 aa14.98□□□□□ -0.01
CPSF1-207ENST00000531727 TMEM204Q9BSN7 226 aa14.98□□□□□ -0.01
CPSF1-207ENST00000531727 BDH2Q9BUT1 245 aa14.98□□□□□ -0.01
CPSF1-207ENST00000531727 TMEM109Q9BVC6 243 aa14.98□□□□□ -0.01
CPSF1-207ENST00000531727 HDHD5Q9BXW7 423 aa14.98□□□□□ -0.01
CPSF1-207ENST00000531727 SERHL2Q9H4I8 314 aa14.98□□□□□ -0.01
CPSF1-207ENST00000531727 SERINC4A6NH21 518 aa14.97□□□□□ -0.01
CPSF1-207ENST00000531727 ESPNB1AK53 854 aa14.97□□□□□ -0.01
CPSF1-207ENST00000531727 ITM2AO43736 263 aa14.97□□□□□ -0.01
CPSF1-207ENST00000531727 LY6G6DO95868 133 aa14.97□□□□□ -0.01
CPSF1-207ENST00000531727 PAX1P15863 534 aa14.97□□□□□ -0.01
CPSF1-207ENST00000531727 SLC7A1P30825 629 aa14.97□□□□□ -0.01
CPSF1-207ENST00000531727 CCR4P51679 360 aa14.97□□□□□ -0.01
CPSF1-207ENST00000531727 QPRTQ15274 297 aa14.97□□□□□ -0.01
CPSF1-207ENST00000531727 ZNF141Q15928 474 aa14.97□□□□□ -0.01
CPSF1-207ENST00000531727 PDCD2Q16342 344 aaPredicted RBP14.97□□□□□ -0.01
CPSF1-207ENST00000531727 OR4F3Q6IEY1 312 aa14.97□□□□□ -0.01
CPSF1-207ENST00000531727 SLC43A2Q8N370 569 aa14.97□□□□□ -0.01
CPSF1-207ENST00000531727 TMEM171Q8WVE6 324 aa14.97□□□□□ -0.01
CPSF1-207ENST00000531727 PKNOX2Q96KN3 472 aa14.97□□□□□ -0.01
CPSF1-207ENST00000531727 SLC35G5Q96KT7 338 aa14.97□□□□□ -0.01
CPSF1-207ENST00000531727 TACO1Q9BSH4 297 aaKnown RBP14.97□□□□□ -0.01
CPSF1-207ENST00000531727 NUP214P35658 2090 aaPredicted RBP14.96□□□□□ -0.01
CPSF1-207ENST00000531727 RNF103-CHMP3A0A140T963 221 aa14.96□□□□□ -0.01
CPSF1-207ENST00000531727 RNASET2O00584 256 aaKnown RBP14.96□□□□□ -0.01
CPSF1-207ENST00000531727 HS3ST1O14792 307 aa14.96□□□□□ -0.01
CPSF1-207ENST00000531727 FCMRO60667 390 aa14.96□□□□□ -0.01
CPSF1-207ENST00000531727 TMCC2O75069 709 aa14.96□□□□□ -0.01
CPSF1-207ENST00000531727 STX11O75558 287 aa14.96□□□□□ -0.01
CPSF1-207ENST00000531727 SERPINE1P05121 402 aa14.96□□□□□ -0.01
CPSF1-207ENST00000531727 YES1P07947 543 aa14.96□□□□□ -0.01
CPSF1-207ENST00000531727 RAC3P60763 192 aa14.96□□□□□ -0.01
CPSF1-207ENST00000531727 SKP2Q13309 424 aa14.96□□□□□ -0.01
CPSF1-207ENST00000531727 GPR68Q15743 365 aa14.96□□□□□ -0.01
CPSF1-207ENST00000531727 ARHGAP11BQ3KRB8 267 aa14.96□□□□□ -0.01
CPSF1-207ENST00000531727 SFRP5Q5T4F7 317 aa14.96□□□□□ -0.01
CPSF1-207ENST00000531727 C3orf33Q6P1S2 294 aa14.96□□□□□ -0.01
CPSF1-207ENST00000531727 WDR93Q6P2C0 686 aa14.96□□□□□ -0.01
CPSF1-207ENST00000531727 CLEC4FQ8N1N0 589 aa14.96□□□□□ -0.01
CPSF1-207ENST00000531727 ZNF611Q8N823 705 aa14.96□□□□□ -0.01
CPSF1-207ENST00000531727 ZNF781Q8N8C0 355 aa14.96□□□□□ -0.01
CPSF1-207ENST00000531727 OR8J2Q8NGG1 315 aa14.96□□□□□ -0.01
CPSF1-207ENST00000531727 ARL8AQ96BM9 186 aa14.96□□□□□ -0.01
CPSF1-207ENST00000531727 PPP1R36Q96LQ0 422 aa14.96□□□□□ -0.01
CPSF1-207ENST00000531727 ZNF350Q9GZX5 532 aa14.96□□□□□ -0.01
CPSF1-207ENST00000531727 LAT2Q9GZY6 243 aa14.96□□□□□ -0.01
CPSF1-207ENST00000531727 AKTIPQ9H8T0 292 aa14.96□□□□□ -0.01
CPSF1-207ENST00000531727 BCO1Q9HAY6 547 aa14.96□□□□□ -0.01
CPSF1-207ENST00000531727 ZNF701Q9NV72 531 aaPredicted RBP14.96□□□□□ -0.01
CPSF1-207ENST00000531727 KCNE5Q9UJ90 142 aa14.96□□□□□ -0.01
CPSF1-207ENST00000531727 IGHV3-15A0A0B4J1V0 119 aa14.95□□□□□ -0.02
CPSF1-207ENST00000531727 A0A1W2PNR3 127 aa14.95□□□□□ -0.02
CPSF1-207ENST00000531727 BIRC5O15392 142 aa14.95□□□□□ -0.02
CPSF1-207ENST00000531727 DNAJA2O60884 412 aa14.95□□□□□ -0.02
CPSF1-207ENST00000531727 UGT2B17O75795 530 aa14.95□□□□□ -0.02
CPSF1-207ENST00000531727 ENPP1P22413 925 aa14.95□□□□□ -0.02
CPSF1-207ENST00000531727 IL32P24001 234 aa14.95□□□□□ -0.02
CPSF1-207ENST00000531727 ABCE1P61221 599 aaKnown RBP14.95□□□□□ -0.02
CPSF1-207ENST00000531727 TSC22D1Q15714 1073 aa14.95□□□□□ -0.02
CPSF1-207ENST00000531727 CHI3L2Q15782 390 aa14.95□□□□□ -0.02
CPSF1-207ENST00000531727 OR4A15Q8NGL6 344 aa14.95□□□□□ -0.02
CPSF1-207ENST00000531727 MIPOL1Q8TD10 442 aa14.95□□□□□ -0.02
CPSF1-207ENST00000531727 ST8SIA1Q92185 356 aa14.95□□□□□ -0.02
CPSF1-207ENST00000531727 AKAP1Q92667 903 aaKnown RBP eCLIP14.95□□□□□ -0.02
CPSF1-207ENST00000531727 PSD2Q9BQI7 771 aa14.95□□□□□ -0.02
CPSF1-207ENST00000531727 THUMPD3Q9BV44 507 aaKnown RBP14.95□□□□□ -0.02
CPSF1-207ENST00000531727 CXorf56Q9H5V9 222 aa14.95□□□□□ -0.02
CPSF1-207ENST00000531727 EXD2Q9NVH0 621 aa14.95□□□□□ -0.02
CPSF1-207ENST00000531727 KLHL9Q9P2J3 617 aa14.95□□□□□ -0.02
CPSF1-207ENST00000531727 ING1Q9UK53 422 aaPredicted RBP14.95□□□□□ -0.02
CPSF1-207ENST00000531727 MKLN1Q9UL63 735 aa14.95□□□□□ -0.02
CPSF1-207ENST00000531727 PCDHGB4Q9UN71 923 aa14.95□□□□□ -0.02
CPSF1-207ENST00000531727 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.95□□□□□ -0.02
CPSF1-207ENST00000531727 RAP2CQ9Y3L5 183 aa14.95□□□□□ -0.02
CPSF1-207ENST00000531727 CENPVL1A0A0U1RR11 272 aa14.94□□□□□ -0.02
CPSF1-207ENST00000531727 WDR91A4D1P6 747 aa14.94□□□□□ -0.02
CPSF1-207ENST00000531727 TRIM64A6NGJ6 449 aa14.94□□□□□ -0.02
CPSF1-207ENST00000531727 TRIM64BA6NI03 449 aa14.94□□□□□ -0.02
CPSF1-207ENST00000531727 SMAD7O15105 426 aaKnown RBP14.94□□□□□ -0.02
CPSF1-207ENST00000531727 SCN2BO60939 215 aa14.94□□□□□ -0.02
CPSF1-207ENST00000531727 CYP7B1O75881 506 aa14.94□□□□□ -0.02
CPSF1-207ENST00000531727 SNUPNO95149 360 aaKnown RBP14.94□□□□□ -0.02
CPSF1-207ENST00000531727 H6PDO95479 791 aa14.94□□□□□ -0.02
CPSF1-207ENST00000531727 AGR2O95994 175 aa14.94□□□□□ -0.02
CPSF1-207ENST00000531727 ADAP00813 363 aa14.94□□□□□ -0.02
CPSF1-207ENST00000531727 CSTAP01040 98 aa14.94□□□□□ -0.02
CPSF1-207ENST00000531727 MYZAPP0CAP1 466 aa14.94□□□□□ -0.02
CPSF1-207ENST00000531727 P2RY6Q15077 328 aa14.94□□□□□ -0.02
CPSF1-207ENST00000531727 KRT71Q3SY84 523 aa14.94□□□□□ -0.02
CPSF1-207ENST00000531727 TIGD2Q4W5G0 525 aa14.94□□□□□ -0.02
CPSF1-207ENST00000531727 HEPHL1Q6MZM0 1159 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms