RNA–Protein interactions for RNA: ENST00000531516.1

C11orf54-210, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3

Gene C11orf54, Length 168 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-210ENST00000531516 KLHL4Q9C0H6 718 aa11.28□□□□□ -0.6
C11orf54-210ENST00000531516 ZNF350Q9GZX5 532 aa11.28□□□□□ -0.6
C11orf54-210ENST00000531516 OPN3Q9H1Y3 402 aaPredicted RBP11.28□□□□□ -0.6
C11orf54-210ENST00000531516 WDR55Q9H6Y2 383 aaPredicted RBP11.28□□□□□ -0.6
C11orf54-210ENST00000531516 GP6Q9HCN6 339 aa11.28□□□□□ -0.6
C11orf54-210ENST00000531516 ICAM5Q9UMF0 924 aa11.28□□□□□ -0.6
C11orf54-210ENST00000531516 NCKAP5O14513 1909 aa11.27□□□□□ -0.6
C11orf54-210ENST00000531516 A0A0J9YW62 118 aa11.27□□□□□ -0.61
C11orf54-210ENST00000531516 FAM221AA4D161 298 aa11.27□□□□□ -0.61
C11orf54-210ENST00000531516 NPIPB9F8W1W9 429 aa11.27□□□□□ -0.61
C11orf54-210ENST00000531516 UBDO15205 165 aa11.27□□□□□ -0.61
C11orf54-210ENST00000531516 DIAPH2O60879 1101 aa11.27□□□□□ -0.61
C11orf54-210ENST00000531516 SS18L1O75177 396 aaPredicted RBP11.27□□□□□ -0.61
C11orf54-210ENST00000531516 AQP8O94778 261 aa11.27□□□□□ -0.61
C11orf54-210ENST00000531516 PRKD3O94806 890 aa11.27□□□□□ -0.61
C11orf54-210ENST00000531516 RAF1P04049 648 aa11.27□□□□□ -0.61
C11orf54-210ENST00000531516 UBTFL6P0CB48 400 aaPredicted RBP11.27□□□□□ -0.61
C11orf54-210ENST00000531516 NR2F1P10589 423 aa11.27□□□□□ -0.61
C11orf54-210ENST00000531516 PRKCAP17252 672 aa11.27□□□□□ -0.61
C11orf54-210ENST00000531516 PSMA4P25789 261 aaKnown RBP11.27□□□□□ -0.61
C11orf54-210ENST00000531516 UGT2B10P36537 528 aa11.27□□□□□ -0.61
C11orf54-210ENST00000531516 IST1P53990 364 aa11.27□□□□□ -0.61
C11orf54-210ENST00000531516 CSNK2A1P68400 391 aaPredicted RBP11.27□□□□□ -0.61
C11orf54-210ENST00000531516 FAM27E3Q08E93 113 aa11.27□□□□□ -0.61
C11orf54-210ENST00000531516 PDCD4Q53EL6 469 aaKnown RBP11.27□□□□□ -0.61
C11orf54-210ENST00000531516 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.27□□□□□ -0.61
C11orf54-210ENST00000531516 HEPHL1Q6MZM0 1159 aa11.27□□□□□ -0.61
C11orf54-210ENST00000531516 CBLN3Q6UW01 205 aa11.27□□□□□ -0.61
C11orf54-210ENST00000531516 CMIPQ8IY22 773 aa11.27□□□□□ -0.61
C11orf54-210ENST00000531516 CLEC4FQ8N1N0 589 aa11.27□□□□□ -0.61
C11orf54-210ENST00000531516 ARFGAP2Q8N6H7 521 aa11.27□□□□□ -0.61
C11orf54-210ENST00000531516 ZNF610Q8N9Z0 462 aa11.27□□□□□ -0.61
C11orf54-210ENST00000531516 SLC25A43Q8WUT9 341 aaPredicted RBP11.27□□□□□ -0.61
C11orf54-210ENST00000531516 TRNT1Q96Q11 434 aaKnown RBP11.27□□□□□ -0.61
C11orf54-210ENST00000531516 FOXC2Q99958 501 aa11.27□□□□□ -0.61
C11orf54-210ENST00000531516 THUMPD3Q9BV44 507 aaKnown RBP11.27□□□□□ -0.61
C11orf54-210ENST00000531516 ARMC7Q9H6L4 198 aa11.27□□□□□ -0.61
C11orf54-210ENST00000531516 PLSCR4Q9NRQ2 329 aa11.27□□□□□ -0.61
C11orf54-210ENST00000531516 THUMPD1Q9NXG2 353 aaKnown RBP11.27□□□□□ -0.61
C11orf54-210ENST00000531516 CALML5Q9NZT1 146 aa11.27□□□□□ -0.61
C11orf54-210ENST00000531516 ZIM2Q9NZV7 527 aa11.27□□□□□ -0.61
C11orf54-210ENST00000531516 KLHL9Q9P2J3 617 aa11.27□□□□□ -0.61
C11orf54-210ENST00000531516 TESMINQ9Y4I5 508 aa11.27□□□□□ -0.61
C11orf54-210ENST00000531516 GPR45Q9Y5Y3 372 aa11.27□□□□□ -0.61
C11orf54-210ENST00000531516 POLR3GO15318 223 aaPredicted RBP11.26□□□□□ -0.61
C11orf54-210ENST00000531516 KIAA0513O60268 411 aa11.26□□□□□ -0.61
C11orf54-210ENST00000531516 FCMRO60667 390 aa11.26□□□□□ -0.61
C11orf54-210ENST00000531516 UGT2B17O75795 530 aa11.26□□□□□ -0.61
C11orf54-210ENST00000531516 TGDSO95455 350 aa11.26□□□□□ -0.61
C11orf54-210ENST00000531516 ALDOCP09972 364 aaKnown RBP11.26□□□□□ -0.61
C11orf54-210ENST00000531516 IL7RP16871 459 aa11.26□□□□□ -0.61
C11orf54-210ENST00000531516 IL11P20809 199 aa11.26□□□□□ -0.61
C11orf54-210ENST00000531516 APOBEC1P41238 236 aaKnown RBP11.26□□□□□ -0.61
C11orf54-210ENST00000531516 HTR3AP46098 478 aa11.26□□□□□ -0.61
C11orf54-210ENST00000531516 RNF144AP50876 292 aaPredicted RBP11.26□□□□□ -0.61
C11orf54-210ENST00000531516 CASP9P55211 416 aa11.26□□□□□ -0.61
C11orf54-210ENST00000531516 RAC3P60763 192 aa11.26□□□□□ -0.61
C11orf54-210ENST00000531516 MERTKQ12866 999 aa11.26□□□□□ -0.61
C11orf54-210ENST00000531516 SLC25A53Q5H9E4 307 aa11.26□□□□□ -0.61
C11orf54-210ENST00000531516 MSANTD1Q6ZTZ1 278 aa11.26□□□□□ -0.61
C11orf54-210ENST00000531516 FCRLAQ7L513 359 aa11.26□□□□□ -0.61
C11orf54-210ENST00000531516 RNF130Q86XS8 419 aa11.26□□□□□ -0.61
C11orf54-210ENST00000531516 PEX5LQ8IYB4 626 aa11.26□□□□□ -0.61
C11orf54-210ENST00000531516 MIER2Q8N344 545 aa11.26□□□□□ -0.61
C11orf54-210ENST00000531516 POC1BQ8TC44 478 aa11.26□□□□□ -0.61
C11orf54-210ENST00000531516 ZNF75CPQ92670 426 aaPredicted RBP11.26□□□□□ -0.61
C11orf54-210ENST00000531516 RAB8BQ92930 207 aa11.26□□□□□ -0.61
C11orf54-210ENST00000531516 ITCHQ96J02 903 aa11.26□□□□□ -0.61
C11orf54-210ENST00000531516 ADGRG7Q96K78 797 aa11.26□□□□□ -0.61
C11orf54-210ENST00000531516 USB1Q9BQ65 265 aaKnown RBP11.26□□□□□ -0.61
C11orf54-210ENST00000531516 HDHD5Q9BXW7 423 aa11.26□□□□□ -0.61
C11orf54-210ENST00000531516 RAD21L1Q9H4I0 556 aa11.26□□□□□ -0.61
C11orf54-210ENST00000531516 MTHFD2LQ9H903 347 aaPredicted RBP11.26□□□□□ -0.61
C11orf54-210ENST00000531516 CCM2LQ9NUG4 571 aaPredicted RBP11.26□□□□□ -0.61
C11orf54-210ENST00000531516 KLHL28Q9NXS3 571 aa11.26□□□□□ -0.61
C11orf54-210ENST00000531516 CLEC4AQ9UMR7 237 aa11.26□□□□□ -0.61
C11orf54-210ENST00000531516 ANKHD1Q8IWZ3 2542 aaKnown RBP11.26□□□□□ -0.61
C11orf54-210ENST00000531516 OTOGQ6ZRI0 2925 aa11.25□□□□□ -0.61
C11orf54-210ENST00000531516 HCFC1P51610 2035 aa11.25□□□□□ -0.61
C11orf54-210ENST00000531516 SCN2BO60939 215 aa11.25□□□□□ -0.61
C11orf54-210ENST00000531516 H6PDO95479 791 aa11.25□□□□□ -0.61
C11orf54-210ENST00000531516 CGAP01215 116 aa11.25□□□□□ -0.61
C11orf54-210ENST00000531516 TFPIP10646 304 aa11.25□□□□□ -0.61
C11orf54-210ENST00000531516 FPR1P21462 350 aa11.25□□□□□ -0.61
C11orf54-210ENST00000531516 ENPP1P22413 925 aa11.25□□□□□ -0.61
C11orf54-210ENST00000531516 KCNJ10P78508 379 aa11.25□□□□□ -0.61
C11orf54-210ENST00000531516 SKP2Q13309 424 aa11.25□□□□□ -0.61
C11orf54-210ENST00000531516 POU4F3Q15319 338 aa11.25□□□□□ -0.61
C11orf54-210ENST00000531516 ZNF239Q16600 458 aaKnown RBP11.25□□□□□ -0.61
C11orf54-210ENST00000531516 ZSWIM7Q19AV6 140 aa11.25□□□□□ -0.61
C11orf54-210ENST00000531516 CTU2Q2VPK5 515 aaKnown RBP11.25□□□□□ -0.61
C11orf54-210ENST00000531516 NDUFAF6Q330K2 333 aa11.25□□□□□ -0.61
C11orf54-210ENST00000531516 TIGD2Q4W5G0 525 aa11.25□□□□□ -0.61
C11orf54-210ENST00000531516 C6orf10Q5SRN2 563 aa11.25□□□□□ -0.61
C11orf54-210ENST00000531516 TYW3Q6IPR3 259 aaKnown RBP11.25□□□□□ -0.61
C11orf54-210ENST00000531516 ZNF474Q6S9Z5 364 aaPredicted RBP11.25□□□□□ -0.61
C11orf54-210ENST00000531516 PAMR1Q6UXH9 720 aa11.25□□□□□ -0.61
C11orf54-210ENST00000531516 LRRC74BQ6ZQY2 392 aa11.25□□□□□ -0.61
C11orf54-210ENST00000531516 HDXQ7Z353 690 aa11.25□□□□□ -0.61
C11orf54-210ENST00000531516 ZNF440Q8IYI8 595 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms