RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 ZNF524Q96C55 264 aa17.34■□□□□ 0.37
SMPD1-205ENST00000531303 ZNF597Q96LX8 424 aa17.34■□□□□ 0.37
SMPD1-205ENST00000531303 FRMD6Q96NE9 622 aa17.34■□□□□ 0.37
SMPD1-205ENST00000531303 PIP5K1AQ99755 562 aa17.34■□□□□ 0.37
SMPD1-205ENST00000531303 FAM173AQ9BQD7 235 aa17.34■□□□□ 0.37
SMPD1-205ENST00000531303 FNDC11Q9BVV2 318 aa17.34■□□□□ 0.37
SMPD1-205ENST00000531303 EVA1AQ9H8M9 152 aa17.34■□□□□ 0.37
SMPD1-205ENST00000531303 TMEM27Q9HBJ8 222 aa17.34■□□□□ 0.37
SMPD1-205ENST00000531303 MAP1BP46821 2468 aaKnown RBP17.34■□□□□ 0.37
SMPD1-205ENST00000531303 FFAR1O14842 300 aa17.33■□□□□ 0.37
SMPD1-205ENST00000531303 CLOCKO15516 846 aa17.33■□□□□ 0.37
SMPD1-205ENST00000531303 LDLRP01130 860 aa17.33■□□□□ 0.37
SMPD1-205ENST00000531303 UQCRBP14927 111 aa17.33■□□□□ 0.37
SMPD1-205ENST00000531303 ANPEPP15144 967 aa17.33■□□□□ 0.37
SMPD1-205ENST00000531303 HOXB6P17509 224 aaKnown RBP17.33■□□□□ 0.37
SMPD1-205ENST00000531303 PGCP20142 388 aa17.33■□□□□ 0.37
SMPD1-205ENST00000531303 MSX1P28360 303 aa17.33■□□□□ 0.37
SMPD1-205ENST00000531303 MEOX1P50221 254 aa17.33■□□□□ 0.37
SMPD1-205ENST00000531303 TOMM20Q15388 145 aa17.33■□□□□ 0.37
SMPD1-205ENST00000531303 LINC00303Q3SY05 128 aa17.33■□□□□ 0.37
SMPD1-205ENST00000531303 OR2T5Q6IEZ7 315 aa17.33■□□□□ 0.37
SMPD1-205ENST00000531303 HMBOX1Q6NT76 420 aa17.33■□□□□ 0.37
SMPD1-205ENST00000531303 ARSKQ6UWY0 536 aa17.33■□□□□ 0.37
SMPD1-205ENST00000531303 LILRA2Q8N149 483 aa17.33■□□□□ 0.37
SMPD1-205ENST00000531303 OR2T29Q8NH02 315 aa17.33■□□□□ 0.37
SMPD1-205ENST00000531303 OR52J3Q8NH60 311 aa17.33■□□□□ 0.37
SMPD1-205ENST00000531303 GPR119Q8TDV5 335 aa17.33■□□□□ 0.37
SMPD1-205ENST00000531303 ADAMTS16Q8TE57 1224 aa17.33■□□□□ 0.37
SMPD1-205ENST00000531303 PHF10Q8WUB8 498 aaKnown RBP17.33■□□□□ 0.37
SMPD1-205ENST00000531303 TMEM41AQ96HV5 264 aa17.33■□□□□ 0.37
SMPD1-205ENST00000531303 PRRC1Q96M27 445 aa17.33■□□□□ 0.37
SMPD1-205ENST00000531303 ZNF347Q96SE7 839 aa17.33■□□□□ 0.37
SMPD1-205ENST00000531303 TRIM2Q9C040 744 aa17.33■□□□□ 0.37
SMPD1-205ENST00000531303 DCLRE1BQ9H816 532 aa17.33■□□□□ 0.37
SMPD1-205ENST00000531303 ZNF71Q9NQZ8 489 aaPredicted RBP17.33■□□□□ 0.37
SMPD1-205ENST00000531303 RPS6KB2Q9UBS0 482 aa17.33■□□□□ 0.37
SMPD1-205ENST00000531303 NKX1-2Q9UD57 310 aaPredicted RBP17.33■□□□□ 0.37
SMPD1-205ENST00000531303 RIMS3Q9UJD0 308 aa17.33■□□□□ 0.37
SMPD1-205ENST00000531303 A4GNTQ9UNA3 340 aa17.33■□□□□ 0.37
SMPD1-205ENST00000531303 VDAC3Q9Y277 283 aa17.33■□□□□ 0.37
SMPD1-205ENST00000531303 TP53TG5Q9Y2B4 290 aa17.33■□□□□ 0.37
SMPD1-205ENST00000531303 U3KQV3 271 aa17.33■□□□□ 0.37
SMPD1-205ENST00000531303 NCKAP5O14513 1909 aa17.33■□□□□ 0.36
SMPD1-205ENST00000531303 IGLV3-32A0A0A0MS00 114 aa17.32■□□□□ 0.36
SMPD1-205ENST00000531303 ANKUB1A6NFN9 424 aa17.32■□□□□ 0.36
SMPD1-205ENST00000531303 KLRC4-KLRK1H3BQV0 150 aa17.32■□□□□ 0.36
SMPD1-205ENST00000531303 FCGR1AP12314 374 aa17.32■□□□□ 0.36
SMPD1-205ENST00000531303 RRM2P31350 389 aa17.32■□□□□ 0.36
SMPD1-205ENST00000531303 CDH12P55289 794 aa17.32■□□□□ 0.36
SMPD1-205ENST00000531303 QPRTQ15274 297 aa17.32■□□□□ 0.36
SMPD1-205ENST00000531303 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.32■□□□□ 0.36
SMPD1-205ENST00000531303 FADS6Q8N9I5 356 aa17.32■□□□□ 0.36
SMPD1-205ENST00000531303 TMEM178AQ8NBL3 297 aa17.32■□□□□ 0.36
SMPD1-205ENST00000531303 NTNG2Q96CW9 530 aa17.32■□□□□ 0.36
SMPD1-205ENST00000531303 SCMH1Q96GD3 660 aa17.32■□□□□ 0.36
SMPD1-205ENST00000531303 PTGES2Q9H7Z7 377 aa17.32■□□□□ 0.36
SMPD1-205ENST00000531303 VNN3Q9NY84 501 aa17.32■□□□□ 0.36
SMPD1-205ENST00000531303 DNAJB9Q9UBS3 223 aa17.32■□□□□ 0.36
SMPD1-205ENST00000531303 BOKQ9UMX3 212 aaPredicted RBP17.32■□□□□ 0.36
SMPD1-205ENST00000531303 TRAV17A0A0B4J275 112 aa17.31■□□□□ 0.36
SMPD1-205ENST00000531303 A0A1B0GWA3 101 aa17.31■□□□□ 0.36
SMPD1-205ENST00000531303 LRRC3CA6NJW4 275 aa17.31■□□□□ 0.36
SMPD1-205ENST00000531303 FMO6PO60774 539 aa17.31■□□□□ 0.36
SMPD1-205ENST00000531303 DEAF1O75398 565 aaPredicted RBP17.31■□□□□ 0.36
SMPD1-205ENST00000531303 ATP6V1G2O95670 118 aa17.31■□□□□ 0.36
SMPD1-205ENST00000531303 IST1P53990 364 aa17.31■□□□□ 0.36
SMPD1-205ENST00000531303 SUMO3P55854 103 aaPredicted RBP17.31■□□□□ 0.36
SMPD1-205ENST00000531303 SESN3P58005 492 aa17.31■□□□□ 0.36
SMPD1-205ENST00000531303 PLGLB1Q02325 96 aa17.31■□□□□ 0.36
SMPD1-205ENST00000531303 ATP6AP1Q15904 470 aa17.31■□□□□ 0.36
SMPD1-205ENST00000531303 POMZP3Q6PJE2 187 aa17.31■□□□□ 0.36
SMPD1-205ENST00000531303 IGFL3Q6UXB1 125 aa17.31■□□□□ 0.36
SMPD1-205ENST00000531303 GDF7Q7Z4P5 450 aa17.31■□□□□ 0.36
SMPD1-205ENST00000531303 PQLC1Q8N2U9 271 aa17.31■□□□□ 0.36
SMPD1-205ENST00000531303 SLC41A3Q96GZ6 507 aa17.31■□□□□ 0.36
SMPD1-205ENST00000531303 PRORYQ9H606 182 aa17.31■□□□□ 0.36
SMPD1-205ENST00000531303 NMNAT1Q9HAN9 279 aaPredicted RBP17.31■□□□□ 0.36
SMPD1-205ENST00000531303 HHATLQ9HCP6 504 aa17.31■□□□□ 0.36
SMPD1-205ENST00000531303 ZFP64Q9NPA5 681 aa17.31■□□□□ 0.36
SMPD1-205ENST00000531303 AGPAT4Q9NRZ5 378 aa17.31■□□□□ 0.36
SMPD1-205ENST00000531303 TAS2R10Q9NYW0 307 aa17.31■□□□□ 0.36
SMPD1-205ENST00000531303 SLC7A7Q9UM01 511 aa17.31■□□□□ 0.36
SMPD1-205ENST00000531303 TRAPPC13A5PLN9 417 aa17.31■□□□□ 0.36
SMPD1-205ENST00000531303 FAM166BA8MTA8 275 aa17.31■□□□□ 0.36
SMPD1-205ENST00000531303 SHISA8B8ZZ34 492 aa17.31■□□□□ 0.36
SMPD1-205ENST00000531303 FAM47E-STBD1D6RA91 191 aa17.31■□□□□ 0.36
SMPD1-205ENST00000531303 PRSS23O95084 383 aa17.31■□□□□ 0.36
SMPD1-205ENST00000531303 NTN1O95631 604 aa17.31■□□□□ 0.36
SMPD1-205ENST00000531303 THY1P04216 161 aa17.31■□□□□ 0.36
SMPD1-205ENST00000531303 H1F0P07305 194 aaKnown RBP17.31■□□□□ 0.36
SMPD1-205ENST00000531303 RFPL3SP0C7P2 107 aa17.31■□□□□ 0.36
SMPD1-205ENST00000531303 GP1BBP13224 206 aa17.31■□□□□ 0.36
SMPD1-205ENST00000531303 PTNP21246 168 aa17.31■□□□□ 0.36
SMPD1-205ENST00000531303 ELAVL4P26378 380 aaKnown RBP17.31■□□□□ 0.36
SMPD1-205ENST00000531303 DPP4P27487 766 aa17.31■□□□□ 0.36
SMPD1-205ENST00000531303 IFNA8P32881 189 aa17.31■□□□□ 0.36
SMPD1-205ENST00000531303 ZNF41P51814 821 aaPredicted RBP17.31■□□□□ 0.36
SMPD1-205ENST00000531303 FOXO1Q12778 655 aa17.31■□□□□ 0.36
SMPD1-205ENST00000531303 FGD3Q5JSP0 725 aa17.31■□□□□ 0.36
SMPD1-205ENST00000531303 FBXW10Q5XX13 1052 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms