RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 GABRG1Q8N1C3 465 aa14.05□□□□□ -0.16
CPSF1-205ENST00000531042 ATP6V1C2Q8NEY4 427 aa14.05□□□□□ -0.16
CPSF1-205ENST00000531042 TOR1AIP2Q8NFQ8 470 aa14.05□□□□□ -0.16
CPSF1-205ENST00000531042 STEAP2Q8NFT2 490 aa14.05□□□□□ -0.16
CPSF1-205ENST00000531042 OR5W2Q8NH69 310 aa14.05□□□□□ -0.16
CPSF1-205ENST00000531042 RFWD2Q8NHY2 731 aa14.05□□□□□ -0.16
CPSF1-205ENST00000531042 ARSGQ96EG1 525 aa14.05□□□□□ -0.16
CPSF1-205ENST00000531042 ZIM3Q96PE6 472 aa14.05□□□□□ -0.16
CPSF1-205ENST00000531042 TMEM204Q9BSN7 226 aa14.05□□□□□ -0.16
CPSF1-205ENST00000531042 BDH2Q9BUT1 245 aa14.05□□□□□ -0.16
CPSF1-205ENST00000531042 TMEM109Q9BVC6 243 aa14.05□□□□□ -0.16
CPSF1-205ENST00000531042 HDHD5Q9BXW7 423 aa14.05□□□□□ -0.16
CPSF1-205ENST00000531042 NMUR2Q9GZQ4 415 aa14.05□□□□□ -0.16
CPSF1-205ENST00000531042 SERHL2Q9H4I8 314 aa14.05□□□□□ -0.16
CPSF1-205ENST00000531042 ZANQ9Y493 2812 aa14.05□□□□□ -0.16
CPSF1-205ENST00000531042 ROS1P08922 2347 aa14.04□□□□□ -0.16
CPSF1-205ENST00000531042 SERINC4A6NH21 518 aa14.04□□□□□ -0.16
CPSF1-205ENST00000531042 DUXAA6NLW8 204 aa14.04□□□□□ -0.16
CPSF1-205ENST00000531042 ETV2O00321 342 aaPredicted RBP14.04□□□□□ -0.16
CPSF1-205ENST00000531042 LY6G6DO95868 133 aa14.04□□□□□ -0.16
CPSF1-205ENST00000531042 AK1P00568 194 aa14.04□□□□□ -0.16
CPSF1-205ENST00000531042 YES1P07947 543 aa14.04□□□□□ -0.16
CPSF1-205ENST00000531042 PAX1P15863 534 aa14.04□□□□□ -0.16
CPSF1-205ENST00000531042 PTH2RP49190 550 aa14.04□□□□□ -0.16
CPSF1-205ENST00000531042 RAC3P60763 192 aa14.04□□□□□ -0.16
CPSF1-205ENST00000531042 SELENBP1Q13228 472 aa14.04□□□□□ -0.16
CPSF1-205ENST00000531042 CBFBQ13951 182 aa14.04□□□□□ -0.16
CPSF1-205ENST00000531042 QPRTQ15274 297 aa14.04□□□□□ -0.16
CPSF1-205ENST00000531042 GPR68Q15743 365 aa14.04□□□□□ -0.16
CPSF1-205ENST00000531042 ZNF141Q15928 474 aa14.04□□□□□ -0.16
CPSF1-205ENST00000531042 OR4F3Q6IEY1 312 aa14.04□□□□□ -0.16
CPSF1-205ENST00000531042 CLEC4FQ8N1N0 589 aa14.04□□□□□ -0.16
CPSF1-205ENST00000531042 SLC43A2Q8N370 569 aa14.04□□□□□ -0.16
CPSF1-205ENST00000531042 TMCO5AQ8N6Q1 288 aa14.04□□□□□ -0.16
CPSF1-205ENST00000531042 ZNF781Q8N8C0 355 aa14.04□□□□□ -0.16
CPSF1-205ENST00000531042 S100PBPQ96BU1 408 aa14.04□□□□□ -0.16
CPSF1-205ENST00000531042 PKNOX2Q96KN3 472 aa14.04□□□□□ -0.16
CPSF1-205ENST00000531042 KCNE5Q9UJ90 142 aa14.04□□□□□ -0.16
CPSF1-205ENST00000531042 PRR14LQ5THK1 2151 aa14.04□□□□□ -0.16
CPSF1-205ENST00000531042 FREM1Q5H8C1 2179 aa14.03□□□□□ -0.16
CPSF1-205ENST00000531042 RNF103-CHMP3A0A140T963 221 aa14.03□□□□□ -0.16
CPSF1-205ENST00000531042 A0A1W2PNR3 127 aa14.03□□□□□ -0.16
CPSF1-205ENST00000531042 WDR91A4D1P6 747 aa14.03□□□□□ -0.16
CPSF1-205ENST00000531042 RNASET2O00584 256 aaKnown RBP14.03□□□□□ -0.16
CPSF1-205ENST00000531042 HS3ST1O14792 307 aa14.03□□□□□ -0.16
CPSF1-205ENST00000531042 FCMRO60667 390 aa14.03□□□□□ -0.16
CPSF1-205ENST00000531042 DNAJA2O60884 412 aa14.03□□□□□ -0.16
CPSF1-205ENST00000531042 STX11O75558 287 aa14.03□□□□□ -0.16
CPSF1-205ENST00000531042 ENPP1P22413 925 aa14.03□□□□□ -0.16
CPSF1-205ENST00000531042 SLC7A1P30825 629 aa14.03□□□□□ -0.16
CPSF1-205ENST00000531042 CCR4P51679 360 aa14.03□□□□□ -0.16
CPSF1-205ENST00000531042 SKP2Q13309 424 aa14.03□□□□□ -0.16
CPSF1-205ENST00000531042 TSC22D1Q15714 1073 aa14.03□□□□□ -0.16
CPSF1-205ENST00000531042 PDCD2Q16342 344 aaPredicted RBP14.03□□□□□ -0.16
CPSF1-205ENST00000531042 ARHGAP11BQ3KRB8 267 aa14.03□□□□□ -0.16
CPSF1-205ENST00000531042 SFRP5Q5T4F7 317 aa14.03□□□□□ -0.16
CPSF1-205ENST00000531042 WDR93Q6P2C0 686 aa14.03□□□□□ -0.16
CPSF1-205ENST00000531042 ZNF611Q8N823 705 aa14.03□□□□□ -0.16
CPSF1-205ENST00000531042 OR8J2Q8NGG1 315 aa14.03□□□□□ -0.16
CPSF1-205ENST00000531042 TMEM171Q8WVE6 324 aa14.03□□□□□ -0.16
CPSF1-205ENST00000531042 SLC35G5Q96KT7 338 aa14.03□□□□□ -0.16
CPSF1-205ENST00000531042 PPP1R36Q96LQ0 422 aa14.03□□□□□ -0.16
CPSF1-205ENST00000531042 TACO1Q9BSH4 297 aaKnown RBP14.03□□□□□ -0.16
CPSF1-205ENST00000531042 THUMPD3Q9BV44 507 aaKnown RBP14.03□□□□□ -0.16
CPSF1-205ENST00000531042 LAT2Q9GZY6 243 aa14.03□□□□□ -0.16
CPSF1-205ENST00000531042 AKTIPQ9H8T0 292 aa14.03□□□□□ -0.16
CPSF1-205ENST00000531042 ING1Q9UK53 422 aaPredicted RBP14.03□□□□□ -0.16
CPSF1-205ENST00000531042 IGHV3-15A0A0B4J1V0 119 aa14.02□□□□□ -0.17
CPSF1-205ENST00000531042 CENPVL1A0A0U1RR11 272 aa14.02□□□□□ -0.17
CPSF1-205ENST00000531042 TRIM64A6NGJ6 449 aa14.02□□□□□ -0.17
CPSF1-205ENST00000531042 TRIM64BA6NI03 449 aa14.02□□□□□ -0.17
CPSF1-205ENST00000531042 SMAD7O15105 426 aaKnown RBP14.02□□□□□ -0.17
CPSF1-205ENST00000531042 BIRC5O15392 142 aa14.02□□□□□ -0.17
CPSF1-205ENST00000531042 SCN2BO60939 215 aa14.02□□□□□ -0.17
CPSF1-205ENST00000531042 TMCC2O75069 709 aa14.02□□□□□ -0.17
CPSF1-205ENST00000531042 UGT2B17O75795 530 aa14.02□□□□□ -0.17
CPSF1-205ENST00000531042 ADAP00813 363 aa14.02□□□□□ -0.17
CPSF1-205ENST00000531042 SERPINE1P05121 402 aa14.02□□□□□ -0.17
CPSF1-205ENST00000531042 ABCE1P61221 599 aaKnown RBP14.02□□□□□ -0.17
CPSF1-205ENST00000531042 CHI3L2Q15782 390 aa14.02□□□□□ -0.17
CPSF1-205ENST00000531042 TIGD2Q4W5G0 525 aa14.02□□□□□ -0.17
CPSF1-205ENST00000531042 HEPHL1Q6MZM0 1159 aa14.02□□□□□ -0.17
CPSF1-205ENST00000531042 ALKBH2Q6NS38 261 aa14.02□□□□□ -0.17
CPSF1-205ENST00000531042 OLIG3Q7RTU3 272 aa14.02□□□□□ -0.17
CPSF1-205ENST00000531042 OR4A15Q8NGL6 344 aa14.02□□□□□ -0.17
CPSF1-205ENST00000531042 RAB3IL1Q8TBN0 382 aa14.02□□□□□ -0.17
CPSF1-205ENST00000531042 MIPOL1Q8TD10 442 aa14.02□□□□□ -0.17
CPSF1-205ENST00000531042 ST8SIA1Q92185 356 aa14.02□□□□□ -0.17
CPSF1-205ENST00000531042 ARL8AQ96BM9 186 aa14.02□□□□□ -0.17
CPSF1-205ENST00000531042 PSD2Q9BQI7 771 aa14.02□□□□□ -0.17
CPSF1-205ENST00000531042 C20orf27Q9GZN8 174 aa14.02□□□□□ -0.17
CPSF1-205ENST00000531042 ZNF350Q9GZX5 532 aa14.02□□□□□ -0.17
CPSF1-205ENST00000531042 OR51I1Q9H343 314 aa14.02□□□□□ -0.17
CPSF1-205ENST00000531042 CXorf56Q9H5V9 222 aa14.02□□□□□ -0.17
CPSF1-205ENST00000531042 BCO1Q9HAY6 547 aa14.02□□□□□ -0.17
CPSF1-205ENST00000531042 ZNF701Q9NV72 531 aaPredicted RBP14.02□□□□□ -0.17
CPSF1-205ENST00000531042 KLHL9Q9P2J3 617 aa14.02□□□□□ -0.17
CPSF1-205ENST00000531042 MKLN1Q9UL63 735 aa14.02□□□□□ -0.17
CPSF1-205ENST00000531042 PCDHGB4Q9UN71 923 aa14.02□□□□□ -0.17
CPSF1-205ENST00000531042 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms