RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 PROS1P07225 676 aa14.48□□□□□ -0.09
PCDHA4-203ENST00000530339 ILKQ13418 452 aa14.48□□□□□ -0.09
PCDHA4-203ENST00000530339 KHSRPQ92945 711 aaKnown RBP eCLIP14.48□□□□□ -0.09
PCDHA4-203ENST00000530339 OR5M11Q96RB7 305 aa14.48□□□□□ -0.09
PCDHA4-203ENST00000530339 CDC6Q99741 560 aa14.48□□□□□ -0.09
PCDHA4-203ENST00000530339 C11orf54Q9H0W9 315 aaPredicted RBP14.48□□□□□ -0.09
PCDHA4-203ENST00000530339 FAM155AB1AL88 458 aaPredicted RBP14.47□□□□□ -0.09
PCDHA4-203ENST00000530339 TRAPPC2P0DI81 140 aa14.47□□□□□ -0.09
PCDHA4-203ENST00000530339 TRAPPC2BP0DI82 140 aa14.47□□□□□ -0.09
PCDHA4-203ENST00000530339 APEX1P27695 318 aaKnown RBP14.47□□□□□ -0.09
PCDHA4-203ENST00000530339 DDOSTP39656 456 aa14.47□□□□□ -0.09
PCDHA4-203ENST00000530339 CREB3L2Q70SY1 520 aa14.47□□□□□ -0.09
PCDHA4-203ENST00000530339 RNF113BQ8IZP6 322 aaKnown RBP14.47□□□□□ -0.09
PCDHA4-203ENST00000530339 OR14K1Q8NGZ2 314 aa14.47□□□□□ -0.09
PCDHA4-203ENST00000530339 GIMAP1Q8WWP7 306 aa14.47□□□□□ -0.09
PCDHA4-203ENST00000530339 FOXRED1Q96CU9 486 aaPredicted RBP14.47□□□□□ -0.09
PCDHA4-203ENST00000530339 FCRL1Q96LA6 429 aa14.47□□□□□ -0.09
PCDHA4-203ENST00000530339 METTL17Q9H7H0 456 aaPredicted RBP14.47□□□□□ -0.09
PCDHA4-203ENST00000530339 FTSJ1Q9UET6 329 aa14.47□□□□□ -0.09
PCDHA4-203ENST00000530339 RCE1Q9Y256 329 aa14.47□□□□□ -0.09
PCDHA4-203ENST00000530339 FAM183AA6NL82 134 aa14.47□□□□□ -0.09
PCDHA4-203ENST00000530339 PEX14O75381 377 aa14.47□□□□□ -0.09
PCDHA4-203ENST00000530339 FBXO45P0C2W1 286 aa14.47□□□□□ -0.09
PCDHA4-203ENST00000530339 TPT1P13693 172 aaKnown RBP14.47□□□□□ -0.09
PCDHA4-203ENST00000530339 ZNF16P17020 682 aaPredicted RBP14.47□□□□□ -0.09
PCDHA4-203ENST00000530339 IL1RNP18510 177 aa14.47□□□□□ -0.09
PCDHA4-203ENST00000530339 IL32P24001 234 aa14.47□□□□□ -0.09
PCDHA4-203ENST00000530339 CD6P30203 668 aa14.47□□□□□ -0.09
PCDHA4-203ENST00000530339 ACOT4Q8N9L9 421 aa14.47□□□□□ -0.09
PCDHA4-203ENST00000530339 ZNF480Q8WV37 535 aa14.47□□□□□ -0.09
PCDHA4-203ENST00000530339 WDR77Q9BQA1 342 aaPredicted RBP14.47□□□□□ -0.09
PCDHA4-203ENST00000530339 PSD2Q9BQI7 771 aa14.47□□□□□ -0.09
PCDHA4-203ENST00000530339 TUBB1Q9H4B7 451 aa14.47□□□□□ -0.09
PCDHA4-203ENST00000530339 ASIC5Q9NY37 505 aa14.47□□□□□ -0.09
PCDHA4-203ENST00000530339 ACTR10Q9NZ32 417 aa14.47□□□□□ -0.09
PCDHA4-203ENST00000530339 PLCH1Q4KWH8 1693 aa14.47□□□□□ -0.09
PCDHA4-203ENST00000530339 SULT1C2O00338 296 aa14.47□□□□□ -0.09
PCDHA4-203ENST00000530339 LATO43561 262 aa14.47□□□□□ -0.09
PCDHA4-203ENST00000530339 RAB40ALP0C0E4 278 aa14.47□□□□□ -0.09
PCDHA4-203ENST00000530339 CERS1P27544 350 aa14.47□□□□□ -0.09
PCDHA4-203ENST00000530339 IDUAP35475 653 aa14.47□□□□□ -0.09
PCDHA4-203ENST00000530339 CDK3Q00526 305 aa14.47□□□□□ -0.09
PCDHA4-203ENST00000530339 SEMA3BQ13214 749 aa14.47□□□□□ -0.09
PCDHA4-203ENST00000530339 SYPL1Q16563 259 aa14.47□□□□□ -0.09
PCDHA4-203ENST00000530339 HBMQ6B0K9 141 aa14.47□□□□□ -0.09
PCDHA4-203ENST00000530339 RTL6Q6ICC9 239 aa14.47□□□□□ -0.09
PCDHA4-203ENST00000530339 UEVLDQ8IX04 471 aa14.47□□□□□ -0.09
PCDHA4-203ENST00000530339 RNF175Q8N4F7 328 aa14.47□□□□□ -0.09
PCDHA4-203ENST00000530339 C12orf45Q8N5I9 185 aaPredicted RBP14.47□□□□□ -0.09
PCDHA4-203ENST00000530339 METTL27Q8N6F8 245 aaPredicted RBP14.47□□□□□ -0.09
PCDHA4-203ENST00000530339 SDR9C7Q8NEX9 313 aa14.47□□□□□ -0.09
PCDHA4-203ENST00000530339 OR1J4Q8NGS1 313 aa14.47□□□□□ -0.09
PCDHA4-203ENST00000530339 RAB40AQ8WXH6 277 aa14.47□□□□□ -0.09
PCDHA4-203ENST00000530339 TOX2Q96NM4 488 aa14.47□□□□□ -0.09
PCDHA4-203ENST00000530339 GPR78Q96P69 363 aa14.47□□□□□ -0.09
PCDHA4-203ENST00000530339 EPHX3Q9H6B9 360 aa14.47□□□□□ -0.09
PCDHA4-203ENST00000530339 BOLA1Q9Y3E2 137 aa14.47□□□□□ -0.09
PCDHA4-203ENST00000530339 ZNF195O14628 629 aa14.47□□□□□ -0.09
PCDHA4-203ENST00000530339 FZD7O75084 574 aa14.47□□□□□ -0.09
PCDHA4-203ENST00000530339 TGM6O95932 706 aa14.47□□□□□ -0.09
PCDHA4-203ENST00000530339 FUT1P19526 365 aa14.47□□□□□ -0.09
PCDHA4-203ENST00000530339 SLC35A2P78381 396 aa14.47□□□□□ -0.09
PCDHA4-203ENST00000530339 BTN1A1Q13410 526 aa14.47□□□□□ -0.09
PCDHA4-203ENST00000530339 ESCO2Q56NI9 601 aa14.47□□□□□ -0.09
PCDHA4-203ENST00000530339 SLC43A2Q8N370 569 aa14.47□□□□□ -0.09
PCDHA4-203ENST00000530339 L3MBTL4Q8NA19 623 aa14.47□□□□□ -0.09
PCDHA4-203ENST00000530339 ZNF419Q96HQ0 510 aaPredicted RBP14.47□□□□□ -0.09
PCDHA4-203ENST00000530339 FN3KQ9H479 309 aa14.47□□□□□ -0.09
PCDHA4-203ENST00000530339 QPCTLQ9NXS2 382 aa14.47□□□□□ -0.09
PCDHA4-203ENST00000530339 TAS2R16Q9NYV7 291 aa14.47□□□□□ -0.09
PCDHA4-203ENST00000530339 KRBOX1C9JBD0 128 aa14.46□□□□□ -0.09
PCDHA4-203ENST00000530339 FABP7O15540 132 aa14.46□□□□□ -0.09
PCDHA4-203ENST00000530339 UBBP0CG47 229 aa14.46□□□□□ -0.09
PCDHA4-203ENST00000530339 UBCP0CG48 685 aaKnown RBP14.46□□□□□ -0.09
PCDHA4-203ENST00000530339 SLC1A3P43003 542 aa14.46□□□□□ -0.09
PCDHA4-203ENST00000530339 RPS25P62851 125 aaKnown RBP14.46□□□□□ -0.09
PCDHA4-203ENST00000530339 TSACCQ96A04 125 aaPredicted RBP14.46□□□□□ -0.09
PCDHA4-203ENST00000530339 DNAJA3Q96EY1 480 aa14.46□□□□□ -0.09
PCDHA4-203ENST00000530339 PRDM9Q9NQV7 894 aa14.46□□□□□ -0.09
PCDHA4-203ENST00000530339 TESQ9UGI8 421 aaKnown RBP14.46□□□□□ -0.09
PCDHA4-203ENST00000530339 DIMT1Q9UNQ2 313 aaKnown RBP14.46□□□□□ -0.09
PCDHA4-203ENST00000530339 KIF13AQ9H1H9 1805 aa14.46□□□□□ -0.09
PCDHA4-203ENST00000530339 TRPM3Q9HCF6 1732 aaPredicted RBP14.46□□□□□ -0.09
PCDHA4-203ENST00000530339 GJB3O75712 270 aa14.46□□□□□ -0.09
PCDHA4-203ENST00000530339 DCAF7P61962 342 aa14.46□□□□□ -0.09
PCDHA4-203ENST00000530339 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.46□□□□□ -0.09
PCDHA4-203ENST00000530339 C12orf76Q8N812 135 aaPredicted RBP14.46□□□□□ -0.09
PCDHA4-203ENST00000530339 PEX11GQ96HA9 241 aa14.46□□□□□ -0.09
PCDHA4-203ENST00000530339 TEX37Q96LM6 180 aa14.46□□□□□ -0.09
PCDHA4-203ENST00000530339 MAN2C1Q9NTJ4 1040 aa14.46□□□□□ -0.09
PCDHA4-203ENST00000530339 USP36Q9P275 1121 aaKnown RBP14.46□□□□□ -0.09
PCDHA4-203ENST00000530339 SRPK3Q9UPE1 567 aa14.46□□□□□ -0.09
PCDHA4-203ENST00000530339 HS3ST2Q9Y278 367 aa14.46□□□□□ -0.09
PCDHA4-203ENST00000530339 THEGLP0DJG4 465 aa14.46□□□□□ -0.09
PCDHA4-203ENST00000530339 MELKQ14680 651 aa14.46□□□□□ -0.09
PCDHA4-203ENST00000530339 GPR139Q6DWJ6 353 aa14.46□□□□□ -0.09
PCDHA4-203ENST00000530339 AWAT2Q6E213 333 aa14.46□□□□□ -0.09
PCDHA4-203ENST00000530339 OR5B12Q96R08 314 aa14.46□□□□□ -0.09
PCDHA4-203ENST00000530339 PRRT1Q99946 306 aa14.46□□□□□ -0.09
PCDHA4-203ENST00000530339 FAM171A2A8MVW0 826 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms