RNA–Protein interactions for RNA: ENST00000529611.5

CCDC90B-213, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2 BASIC

Gene CCDC90B, Length 1,986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-213ENST00000529611 GRK6P43250 576 aa14.18□□□□□ -0.14
CCDC90B-213ENST00000529611 CTBP2P56545 445 aa14.18□□□□□ -0.14
CCDC90B-213ENST00000529611 TRA2AQ13595 282 aaKnown RBP eCLIP14.18□□□□□ -0.14
CCDC90B-213ENST00000529611 PGGHGQ32M88 737 aa14.18□□□□□ -0.14
CCDC90B-213ENST00000529611 MEDAGQ5VYS4 303 aa14.18□□□□□ -0.14
CCDC90B-213ENST00000529611 PLAG1Q6DJT9 500 aa14.18□□□□□ -0.14
CCDC90B-213ENST00000529611 DESI1Q6ICB0 168 aa14.18□□□□□ -0.14
CCDC90B-213ENST00000529611 LCN10Q6JVE6 187 aa14.18□□□□□ -0.14
CCDC90B-213ENST00000529611 ULK3Q6PHR2 472 aa14.18□□□□□ -0.14
CCDC90B-213ENST00000529611 LINC00114Q6XXX2 140 aa14.18□□□□□ -0.14
CCDC90B-213ENST00000529611 BMPERQ8N8U9 685 aa14.18□□□□□ -0.14
CCDC90B-213ENST00000529611 SAMD8Q96LT4 415 aa14.18□□□□□ -0.14
CCDC90B-213ENST00000529611 ZNF582Q96NG8 517 aaPredicted RBP14.18□□□□□ -0.14
CCDC90B-213ENST00000529611 SLC38A2Q96QD8 506 aa14.18□□□□□ -0.14
CCDC90B-213ENST00000529611 CDCA4Q9BXL8 241 aa14.18□□□□□ -0.14
CCDC90B-213ENST00000529611 TAS2R16Q9NYV7 291 aa14.18□□□□□ -0.14
CCDC90B-213ENST00000529611 TMEM5Q9Y2B1 443 aa14.18□□□□□ -0.14
CCDC90B-213ENST00000529611 GPR52Q9Y2T5 361 aa14.18□□□□□ -0.14
CCDC90B-213ENST00000529611 RPL36Q9Y3U8 105 aaKnown RBP14.18□□□□□ -0.14
CCDC90B-213ENST00000529611 WDFY3Q8IZQ1 3526 aa14.18□□□□□ -0.14
CCDC90B-213ENST00000529611 SCDO00767 359 aa14.18□□□□□ -0.14
CCDC90B-213ENST00000529611 OIP5O43482 229 aa14.18□□□□□ -0.14
CCDC90B-213ENST00000529611 ICOSLGO75144 302 aa14.18□□□□□ -0.14
CCDC90B-213ENST00000529611 ALOX12BO75342 701 aa14.18□□□□□ -0.14
CCDC90B-213ENST00000529611 REM1O75628 298 aa14.18□□□□□ -0.14
CCDC90B-213ENST00000529611 CCNA2P20248 432 aa14.18□□□□□ -0.14
CCDC90B-213ENST00000529611 TBXA2RP21731 343 aa14.18□□□□□ -0.14
CCDC90B-213ENST00000529611 IL11RAQ14626 422 aa14.18□□□□□ -0.14
CCDC90B-213ENST00000529611 DBX2Q6ZNG2 339 aa14.18□□□□□ -0.14
CCDC90B-213ENST00000529611 BPHLQ86WA6 291 aaPredicted RBP14.18□□□□□ -0.14
CCDC90B-213ENST00000529611 ZNF440Q8IYI8 595 aa14.18□□□□□ -0.14
CCDC90B-213ENST00000529611 CACTIN-AS1Q8N1I8 211 aa14.18□□□□□ -0.14
CCDC90B-213ENST00000529611 FANK1Q8TC84 345 aa14.18□□□□□ -0.14
CCDC90B-213ENST00000529611 BRIX1Q8TDN6 353 aaKnown RBP14.18□□□□□ -0.14
CCDC90B-213ENST00000529611 PRRG3Q9BZD7 231 aa14.18□□□□□ -0.14
CCDC90B-213ENST00000529611 OR52D1Q9H346 318 aa14.18□□□□□ -0.14
CCDC90B-213ENST00000529611 HHATLQ9HCP6 504 aa14.18□□□□□ -0.14
CCDC90B-213ENST00000529611 RPS6KB2Q9UBS0 482 aa14.18□□□□□ -0.14
CCDC90B-213ENST00000529611 M0R082 166 aa14.17□□□□□ -0.14
CCDC90B-213ENST00000529611 MEN1O00255 615 aa14.17□□□□□ -0.14
CCDC90B-213ENST00000529611 KHNYNO15037 678 aaKnown RBP14.17□□□□□ -0.14
CCDC90B-213ENST00000529611 SURF4O15260 269 aa14.17□□□□□ -0.14
CCDC90B-213ENST00000529611 TSPAN2O60636 221 aa14.17□□□□□ -0.14
CCDC90B-213ENST00000529611 GABARAPO95166 117 aa14.17□□□□□ -0.14
CCDC90B-213ENST00000529611 LDOC1O95751 146 aaPredicted RBP14.17□□□□□ -0.14
CCDC90B-213ENST00000529611 CH25HO95992 272 aa14.17□□□□□ -0.14
CCDC90B-213ENST00000529611 UBL4AP11441 157 aa14.17□□□□□ -0.14
CCDC90B-213ENST00000529611 NR4A1P22736 598 aa14.17□□□□□ -0.14
CCDC90B-213ENST00000529611 LCN1P31025 176 aa14.17□□□□□ -0.14
CCDC90B-213ENST00000529611 MLLT10P55197 1068 aa14.17□□□□□ -0.14
CCDC90B-213ENST00000529611 NFATC3Q12968 1075 aa14.17□□□□□ -0.14
CCDC90B-213ENST00000529611 SKP2Q13309 424 aa14.17□□□□□ -0.14
CCDC90B-213ENST00000529611 CTF1Q16619 201 aa14.17□□□□□ -0.14
CCDC90B-213ENST00000529611 HSDL2Q6YN16 418 aa14.17□□□□□ -0.14
CCDC90B-213ENST00000529611 BMP8AQ7Z5Y6 402 aa14.17□□□□□ -0.14
CCDC90B-213ENST00000529611 CDK20Q8IZL9 346 aa14.17□□□□□ -0.14
CCDC90B-213ENST00000529611 APCDD1LQ8NCL9 501 aa14.17□□□□□ -0.14
CCDC90B-213ENST00000529611 AGBL5Q8NDL9 886 aa14.17□□□□□ -0.14
CCDC90B-213ENST00000529611 C17orf47Q8NEP4 570 aa14.17□□□□□ -0.14
CCDC90B-213ENST00000529611 OR2T33Q8NG76 320 aa14.17□□□□□ -0.14
CCDC90B-213ENST00000529611 C9orf43Q8TAL5 461 aaPredicted RBP14.17□□□□□ -0.14
CCDC90B-213ENST00000529611 PHOSPHO1Q8TCT1 267 aa14.17□□□□□ -0.14
CCDC90B-213ENST00000529611 ZFAND2BQ8WV99 257 aa14.17□□□□□ -0.14
CCDC90B-213ENST00000529611 SPSB2Q99619 263 aa14.17□□□□□ -0.14
CCDC90B-213ENST00000529611 SEMA4CQ9C0C4 833 aa14.17□□□□□ -0.14
CCDC90B-213ENST00000529611 UBQLN3Q9H347 655 aa14.17□□□□□ -0.14
CCDC90B-213ENST00000529611 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.16□□□□□ -0.14
CCDC90B-213ENST00000529611 LNP1A1A4G5 178 aa14.16□□□□□ -0.14
CCDC90B-213ENST00000529611 SAGE2PA6NJ88 616 aa14.16□□□□□ -0.14
CCDC90B-213ENST00000529611 ABCD3P28288 659 aa14.16□□□□□ -0.14
CCDC90B-213ENST00000529611 IL12BP29460 328 aa14.16□□□□□ -0.14
CCDC90B-213ENST00000529611 TGFBR2P37173 567 aa14.16□□□□□ -0.14
CCDC90B-213ENST00000529611 PLCXD2Q0VAA5 305 aa14.16□□□□□ -0.14
CCDC90B-213ENST00000529611 AQP6Q13520 282 aa14.16□□□□□ -0.14
CCDC90B-213ENST00000529611 CBLN3Q6UW01 205 aa14.16□□□□□ -0.14
CCDC90B-213ENST00000529611 SLCO6A1Q86UG4 719 aa14.16□□□□□ -0.14
CCDC90B-213ENST00000529611 SLC34A3Q8N130 599 aa14.16□□□□□ -0.14
CCDC90B-213ENST00000529611 NFAM1Q8NET5 270 aaPredicted RBP14.16□□□□□ -0.14
CCDC90B-213ENST00000529611 OR13C2Q8NGS9 318 aa14.16□□□□□ -0.14
CCDC90B-213ENST00000529611 C3orf49Q96BT1 292 aa14.16□□□□□ -0.14
CCDC90B-213ENST00000529611 HSPBAP1Q96EW2 488 aa14.16□□□□□ -0.14
CCDC90B-213ENST00000529611 LOXL4Q96JB6 756 aa14.16□□□□□ -0.14
CCDC90B-213ENST00000529611 ENKD1Q9H0I2 346 aa14.16□□□□□ -0.14
CCDC90B-213ENST00000529611 SLC26A1Q9H2B4 701 aa14.16□□□□□ -0.14
CCDC90B-213ENST00000529611 AKIRIN1Q9H9L7 192 aaPredicted RBP14.16□□□□□ -0.14
CCDC90B-213ENST00000529611 EXOSC3Q9NQT5 275 aaKnown RBP14.16□□□□□ -0.14
CCDC90B-213ENST00000529611 SIGLEC7Q9Y286 467 aa14.16□□□□□ -0.14
CCDC90B-213ENST00000529611 CARD8Q9Y2G2 431 aa14.16□□□□□ -0.14
CCDC90B-213ENST00000529611 CPNE3O75131 537 aaKnown RBP14.16□□□□□ -0.14
CCDC90B-213ENST00000529611 GP1BAP07359 652 aa14.16□□□□□ -0.14
CCDC90B-213ENST00000529611 SAGP10523 405 aaPredicted RBP14.16□□□□□ -0.14
CCDC90B-213ENST00000529611 CCL4P13236 92 aa14.16□□□□□ -0.14
CCDC90B-213ENST00000529611 ZNF28P17035 718 aa14.16□□□□□ -0.14
CCDC90B-213ENST00000529611 ACP1P24666 158 aa14.16□□□□□ -0.14
CCDC90B-213ENST00000529611 LIPAP38571 399 aa14.16□□□□□ -0.14
CCDC90B-213ENST00000529611 EMP2P54851 167 aa14.16□□□□□ -0.14
CCDC90B-213ENST00000529611 COPZ1P61923 177 aa14.16□□□□□ -0.14
CCDC90B-213ENST00000529611 RNF4P78317 190 aa14.16□□□□□ -0.14
CCDC90B-213ENST00000529611 NCF4Q15080 339 aa14.16□□□□□ -0.14
CCDC90B-213ENST00000529611 TIGD6Q17RP2 521 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms