RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	POLR2J	P52435	117 aa	Known RBP	10.54	□□□□□ -0.72
PSMC3-205	ENST00000528362	MVD	P53602	400 aa		10.54	□□□□□ -0.72
PSMC3-205	ENST00000528362	PPP2R2A	P63151	447 aa		10.54	□□□□□ -0.72
PSMC3-205	ENST00000528362	HPCA	P84074	193 aa		10.54	□□□□□ -0.72
PSMC3-205	ENST00000528362	PLAUR	Q03405	335 aa		10.54	□□□□□ -0.72
PSMC3-205	ENST00000528362	CHRNE	Q04844	493 aa		10.54	□□□□□ -0.72
PSMC3-205	ENST00000528362	FGFBP1	Q14512	234 aa		10.54	□□□□□ -0.72
PSMC3-205	ENST00000528362	QPRT	Q15274	297 aa		10.54	□□□□□ -0.72
PSMC3-205	ENST00000528362	SYPL1	Q16563	259 aa		10.54	□□□□□ -0.72
PSMC3-205	ENST00000528362	SGCB	Q16585	318 aa		10.54	□□□□□ -0.72
PSMC3-205	ENST00000528362	GTDC1	Q4AE62	458 aa		10.54	□□□□□ -0.72
PSMC3-205	ENST00000528362	SLC25A53	Q5H9E4	307 aa		10.54	□□□□□ -0.72
PSMC3-205	ENST00000528362	HBM	Q6B0K9	141 aa		10.54	□□□□□ -0.72
PSMC3-205	ENST00000528362	PPP4R4	Q6NUP7	873 aa		10.54	□□□□□ -0.72
PSMC3-205	ENST00000528362	MSANTD1	Q6ZTZ1	278 aa		10.54	□□□□□ -0.72
PSMC3-205	ENST00000528362	CDH24	Q86UP0	819 aa		10.54	□□□□□ -0.72
PSMC3-205	ENST00000528362	ZNF619	Q8N2I2	560 aa		10.54	□□□□□ -0.72
PSMC3-205	ENST00000528362	MIER2	Q8N344	545 aa		10.54	□□□□□ -0.72
PSMC3-205	ENST00000528362	GOLGA6L1	Q8N7Z2	621 aa		10.54	□□□□□ -0.72
PSMC3-205	ENST00000528362	ZFP90	Q8TF47	636 aa		10.54	□□□□□ -0.72
PSMC3-205	ENST00000528362	OIT3	Q8WWZ8	545 aa		10.54	□□□□□ -0.72
PSMC3-205	ENST00000528362	VPS33A	Q96AX1	596 aa		10.54	□□□□□ -0.72
PSMC3-205	ENST00000528362	ZG16B	Q96DA0	208 aa		10.54	□□□□□ -0.72
PSMC3-205	ENST00000528362	MRGPRX4	Q96LA9	322 aa		10.54	□□□□□ -0.72
PSMC3-205	ENST00000528362	TRNT1	Q96Q11	434 aa	Known RBP	10.54	□□□□□ -0.72
PSMC3-205	ENST00000528362	EBF4	Q9BQW3	602 aa		10.54	□□□□□ -0.72
PSMC3-205	ENST00000528362	GPATCH1	Q9BRR8	931 aa	Known RBP	10.54	□□□□□ -0.72
PSMC3-205	ENST00000528362	QRSL1	Q9H0R6	528 aa	Known RBP	10.54	□□□□□ -0.72
PSMC3-205	ENST00000528362	OPN3	Q9H1Y3	402 aa	Predicted RBP	10.54	□□□□□ -0.72
PSMC3-205	ENST00000528362	SLC38A1	Q9H2H9	487 aa		10.54	□□□□□ -0.72
PSMC3-205	ENST00000528362	TCF7L2	Q9NQB0	619 aa		10.54	□□□□□ -0.72
PSMC3-205	ENST00000528362	INTS9	Q9NV88	658 aa	Known RBP	10.54	□□□□□ -0.72
PSMC3-205	ENST00000528362	PAQR5	Q9NXK6	330 aa	Predicted RBP	10.54	□□□□□ -0.72
PSMC3-205	ENST00000528362	FAM234B	A2RU67	622 aa		10.53	□□□□□ -0.72
PSMC3-205	ENST00000528362	CLDN24	A6NM45	220 aa		10.53	□□□□□ -0.72
PSMC3-205	ENST00000528362		A6NNC1	897 aa		10.53	□□□□□ -0.72
PSMC3-205	ENST00000528362	POLR3G	O15318	223 aa	Predicted RBP	10.53	□□□□□ -0.72
PSMC3-205	ENST00000528362	SS18L1	O75177	396 aa	Predicted RBP	10.53	□□□□□ -0.72
PSMC3-205	ENST00000528362	ZCCHC18	P0CG32	403 aa		10.53	□□□□□ -0.72
PSMC3-205	ENST00000528362	EPX	P11678	715 aa		10.53	□□□□□ -0.72
PSMC3-205	ENST00000528362	CCKAR	P32238	428 aa		10.53	□□□□□ -0.72
PSMC3-205	ENST00000528362	CPOX	P36551	454 aa		10.53	□□□□□ -0.72
PSMC3-205	ENST00000528362	PGM1	P36871	562 aa		10.53	□□□□□ -0.72
PSMC3-205	ENST00000528362	MRPL19	P49406	292 aa	Known RBP	10.53	□□□□□ -0.72
PSMC3-205	ENST00000528362	ANXA11	P50995	505 aa	Known RBP	10.53	□□□□□ -0.72
PSMC3-205	ENST00000528362	TXNL4A	P83876	142 aa	Known RBP	10.53	□□□□□ -0.72
PSMC3-205	ENST00000528362	CBFB	Q13951	182 aa		10.53	□□□□□ -0.72
PSMC3-205	ENST00000528362	MAPK11	Q15759	364 aa		10.53	□□□□□ -0.72
PSMC3-205	ENST00000528362	ZNF239	Q16600	458 aa	Known RBP	10.53	□□□□□ -0.72
PSMC3-205	ENST00000528362	GPAT3	Q53EU6	434 aa		10.53	□□□□□ -0.72
PSMC3-205	ENST00000528362	ZNF474	Q6S9Z5	364 aa	Predicted RBP	10.53	□□□□□ -0.72
PSMC3-205	ENST00000528362	EIF3M	Q7L2H7	374 aa	Known RBP	10.53	□□□□□ -0.72
PSMC3-205	ENST00000528362	FAM214B	Q7L5A3	538 aa		10.53	□□□□□ -0.72
PSMC3-205	ENST00000528362	LINC01560	Q8TB33	94 aa		10.53	□□□□□ -0.72
PSMC3-205	ENST00000528362	DYDC1	Q8WWB3	177 aa		10.53	□□□□□ -0.72
PSMC3-205	ENST00000528362	CKAP2	Q8WWK9	683 aa		10.53	□□□□□ -0.72
PSMC3-205	ENST00000528362	NRGN	Q92686	78 aa		10.53	□□□□□ -0.72
PSMC3-205	ENST00000528362	OSTF1	Q92882	214 aa		10.53	□□□□□ -0.72
PSMC3-205	ENST00000528362	AURKB	Q96GD4	344 aa	Predicted RBP	10.53	□□□□□ -0.72
PSMC3-205	ENST00000528362	ITCH	Q96J02	903 aa		10.53	□□□□□ -0.72
PSMC3-205	ENST00000528362	THUMPD3	Q9BV44	507 aa	Known RBP	10.53	□□□□□ -0.72
PSMC3-205	ENST00000528362	SRXN1	Q9BYN0	137 aa		10.53	□□□□□ -0.72
PSMC3-205	ENST00000528362	COQ10B	Q9H8M1	238 aa		10.53	□□□□□ -0.72
PSMC3-205	ENST00000528362	RASSF1	Q9NS23	344 aa		10.53	□□□□□ -0.72
PSMC3-205	ENST00000528362	MCTS1	Q9ULC4	181 aa	Known RBP	10.53	□□□□□ -0.72
PSMC3-205	ENST00000528362	CLEC4A	Q9UMR7	237 aa		10.53	□□□□□ -0.72
PSMC3-205	ENST00000528362	LIPT1	Q9Y234	373 aa		10.53	□□□□□ -0.72
PSMC3-205	ENST00000528362	SLC35A3	Q9Y2D2	325 aa		10.53	□□□□□ -0.72
PSMC3-205	ENST00000528362	HCFC1	P51610	2035 aa		10.52	□□□□□ -0.73
PSMC3-205	ENST00000528362	SPG11	Q96JI7	2443 aa		10.52	□□□□□ -0.73
PSMC3-205	ENST00000528362	AGAP5	A6NIR3	686 aa		10.52	□□□□□ -0.73
PSMC3-205	ENST00000528362	ADAM11	O75078	769 aa		10.52	□□□□□ -0.73
PSMC3-205	ENST00000528362	SYNGR4	O95473	234 aa		10.52	□□□□□ -0.73
PSMC3-205	ENST00000528362	KRT75	O95678	551 aa		10.52	□□□□□ -0.73
PSMC3-205	ENST00000528362	CD8B	P10966	210 aa		10.52	□□□□□ -0.73
PSMC3-205	ENST00000528362	HOXB9	P17482	250 aa	Predicted RBP	10.52	□□□□□ -0.73
PSMC3-205	ENST00000528362	RPS4Y1	P22090	263 aa	Known RBP	10.52	□□□□□ -0.73
PSMC3-205	ENST00000528362	AQP5	P55064	265 aa		10.52	□□□□□ -0.73
PSMC3-205	ENST00000528362	CARD18	P57730	90 aa		10.52	□□□□□ -0.73
PSMC3-205	ENST00000528362	SESN3	P58005	492 aa		10.52	□□□□□ -0.73
PSMC3-205	ENST00000528362	STX1B	P61266	288 aa		10.52	□□□□□ -0.73
PSMC3-205	ENST00000528362	FAM27E3	Q08E93	113 aa		10.52	□□□□□ -0.73
PSMC3-205	ENST00000528362	SELENBP1	Q13228	472 aa		10.52	□□□□□ -0.73
PSMC3-205	ENST00000528362	DAZAP2	Q15038	168 aa	Predicted RBP	10.52	□□□□□ -0.73
PSMC3-205	ENST00000528362	TMEM176B	Q3YBM2	270 aa	Predicted RBP	10.52	□□□□□ -0.73
PSMC3-205	ENST00000528362	PDSS1	Q5T2R2	415 aa		10.52	□□□□□ -0.73
PSMC3-205	ENST00000528362	LRRC74B	Q6ZQY2	392 aa		10.52	□□□□□ -0.73
PSMC3-205	ENST00000528362	FUNDC1	Q8IVP5	155 aa		10.52	□□□□□ -0.73
PSMC3-205	ENST00000528362	ATP6V1C2	Q8NEY4	427 aa		10.52	□□□□□ -0.73
PSMC3-205	ENST00000528362	ST8SIA1	Q92185	356 aa		10.52	□□□□□ -0.73
PSMC3-205	ENST00000528362	GTF2H4	Q92759	462 aa		10.52	□□□□□ -0.73
PSMC3-205	ENST00000528362	GMPPA	Q96IJ6	420 aa	Predicted RBP	10.52	□□□□□ -0.73
PSMC3-205	ENST00000528362	CCDC28B	Q9BUN5	200 aa		10.52	□□□□□ -0.73
PSMC3-205	ENST00000528362	PRRG4	Q9BZD6	226 aa		10.52	□□□□□ -0.73
PSMC3-205	ENST00000528362	CLEC4M	Q9H2X3	399 aa	Predicted RBP	10.52	□□□□□ -0.73
PSMC3-205	ENST00000528362	RMND5A	Q9H871	391 aa		10.52	□□□□□ -0.73
PSMC3-205	ENST00000528362	TPT1P8	Q9HAU6	139 aa		10.52	□□□□□ -0.73
PSMC3-205	ENST00000528362	DNAJB12	Q9NXW2	375 aa	Known RBP	10.52	□□□□□ -0.73
PSMC3-205	ENST00000528362	TESMIN	Q9Y4I5	508 aa		10.52	□□□□□ -0.73
PSMC3-205	ENST00000528362	SH3D21	A4FU49	640 aa		10.51	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms