RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 SAP130Q9H0E3 1048 aa8.62□□□□□ -1.03
CHD7-208ENST00000528280 OR51I1Q9H343 314 aa8.62□□□□□ -1.03
CHD7-208ENST00000528280 RMND5AQ9H871 391 aa8.62□□□□□ -1.03
CHD7-208ENST00000528280 MTHFD2LQ9H903 347 aaPredicted RBP8.62□□□□□ -1.03
CHD7-208ENST00000528280 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.62□□□□□ -1.03
CHD7-208ENST00000528280 THUMPD1Q9NXG2 353 aaKnown RBP8.62□□□□□ -1.03
CHD7-208ENST00000528280 WDR45Q9Y484 360 aa8.62□□□□□ -1.03
CHD7-208ENST00000528280 GPR45Q9Y5Y3 372 aa8.62□□□□□ -1.03
CHD7-208ENST00000528280 KCNE3Q9Y6H6 103 aa8.62□□□□□ -1.03
CHD7-208ENST00000528280 H0YC42 278 aa8.61□□□□□ -1.03
CHD7-208ENST00000528280 UBDO15205 165 aa8.61□□□□□ -1.03
CHD7-208ENST00000528280 FCMRO60667 390 aa8.61□□□□□ -1.03
CHD7-208ENST00000528280 DNAJA2O60884 412 aa8.61□□□□□ -1.03
CHD7-208ENST00000528280 PRKD3O94806 890 aa8.61□□□□□ -1.03
CHD7-208ENST00000528280 CSTAP01040 98 aa8.61□□□□□ -1.03
CHD7-208ENST00000528280 CGAP01215 116 aa8.61□□□□□ -1.03
CHD7-208ENST00000528280 OR12D1P0DN82 309 aa8.61□□□□□ -1.03
CHD7-208ENST00000528280 KITP10721 976 aa8.61□□□□□ -1.03
CHD7-208ENST00000528280 POU2F1P14859 743 aa8.61□□□□□ -1.03
CHD7-208ENST00000528280 PRKCAP17252 672 aa8.61□□□□□ -1.03
CHD7-208ENST00000528280 EPHA3P29320 983 aa8.61□□□□□ -1.03
CHD7-208ENST00000528280 SLC7A1P30825 629 aa8.61□□□□□ -1.03
CHD7-208ENST00000528280 APOBEC1P41238 236 aaKnown RBP8.61□□□□□ -1.03
CHD7-208ENST00000528280 SLC6A8P48029 635 aa8.61□□□□□ -1.03
CHD7-208ENST00000528280 CLK1P49759 484 aaKnown RBP8.61□□□□□ -1.03
CHD7-208ENST00000528280 MAP2K6P52564 334 aa8.61□□□□□ -1.03
CHD7-208ENST00000528280 TPD52P55327 224 aaPredicted RBP8.61□□□□□ -1.03
CHD7-208ENST00000528280 PHC1P78364 1004 aa8.61□□□□□ -1.03
CHD7-208ENST00000528280 SNTB1Q13884 538 aaKnown RBP8.61□□□□□ -1.03
CHD7-208ENST00000528280 CD226Q15762 336 aa8.61□□□□□ -1.03
CHD7-208ENST00000528280 ZSWIM7Q19AV6 140 aa8.61□□□□□ -1.03
CHD7-208ENST00000528280 PDCD4Q53EL6 469 aaKnown RBP8.61□□□□□ -1.03
CHD7-208ENST00000528280 TMEM201Q5SNT2 666 aa8.61□□□□□ -1.03
CHD7-208ENST00000528280 PDZK1Q5T2W1 519 aa8.61□□□□□ -1.03
CHD7-208ENST00000528280 PPP4R4Q6NUP7 873 aa8.61□□□□□ -1.03
CHD7-208ENST00000528280 MSANTD1Q6ZTZ1 278 aa8.61□□□□□ -1.03
CHD7-208ENST00000528280 ANKRD46Q86W74 232 aa8.61□□□□□ -1.03
CHD7-208ENST00000528280 CDC20BQ86Y33 519 aa8.61□□□□□ -1.03
CHD7-208ENST00000528280 CMIPQ8IY22 773 aa8.61□□□□□ -1.03
CHD7-208ENST00000528280 ZNF610Q8N9Z0 462 aa8.61□□□□□ -1.03
CHD7-208ENST00000528280 FBXO27Q8NI29 283 aa8.61□□□□□ -1.03
CHD7-208ENST00000528280 POC1BQ8TC44 478 aa8.61□□□□□ -1.03
CHD7-208ENST00000528280 NUDT8Q8WV74 236 aa8.61□□□□□ -1.03
CHD7-208ENST00000528280 MAELQ96JY0 434 aaKnown RBP8.61□□□□□ -1.03
CHD7-208ENST00000528280 ADGRG7Q96K78 797 aa8.61□□□□□ -1.03
CHD7-208ENST00000528280 TRNT1Q96Q11 434 aaKnown RBP8.61□□□□□ -1.03
CHD7-208ENST00000528280 FOXC2Q99958 501 aa8.61□□□□□ -1.03
CHD7-208ENST00000528280 GPATCH1Q9BRR8 931 aaKnown RBP8.61□□□□□ -1.03
CHD7-208ENST00000528280 ZNF350Q9GZX5 532 aa8.61□□□□□ -1.03
CHD7-208ENST00000528280 OR10A4Q9H209 315 aa8.61□□□□□ -1.03
CHD7-208ENST00000528280 WDR55Q9H6Y2 383 aaPredicted RBP8.61□□□□□ -1.03
CHD7-208ENST00000528280 CALML5Q9NZT1 146 aa8.61□□□□□ -1.03
CHD7-208ENST00000528280 ZIM2Q9NZV7 527 aa8.61□□□□□ -1.03
CHD7-208ENST00000528280 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.61□□□□□ -1.03
CHD7-208ENST00000528280 ST6GALNAC2Q9UJ37 374 aa8.61□□□□□ -1.03
CHD7-208ENST00000528280 MKLN1Q9UL63 735 aa8.61□□□□□ -1.03
CHD7-208ENST00000528280 SPIN1Q9Y657 262 aaPredicted RBP8.61□□□□□ -1.03
CHD7-208ENST00000528280 PCNX3Q9H6A9 2034 aa8.61□□□□□ -1.03
CHD7-208ENST00000528280 MED12LQ86YW9 2145 aa8.6□□□□□ -1.03
CHD7-208ENST00000528280 ACANP16112 2415 aa8.6□□□□□ -1.03
CHD7-208ENST00000528280 A0A0J9YW62 118 aa8.6□□□□□ -1.03
CHD7-208ENST00000528280 GOLGA8QA0A0J9YX86 632 aa8.6□□□□□ -1.03
CHD7-208ENST00000528280 GOLGA8OA6NCC3 632 aa8.6□□□□□ -1.03
CHD7-208ENST00000528280 TMEM247A6NEH6 219 aa8.6□□□□□ -1.03
CHD7-208ENST00000528280 SHISA8B8ZZ34 492 aa8.6□□□□□ -1.03
CHD7-208ENST00000528280 GOLGA8NF8WBI6 632 aa8.6□□□□□ -1.03
CHD7-208ENST00000528280 ETV2O00321 342 aaPredicted RBP8.6□□□□□ -1.03
CHD7-208ENST00000528280 RFXANKO14593 260 aa8.6□□□□□ -1.03
CHD7-208ENST00000528280 TNFSF11O14788 317 aa8.6□□□□□ -1.03
CHD7-208ENST00000528280 CXCL13O43927 109 aa8.6□□□□□ -1.03
CHD7-208ENST00000528280 SS18L1O75177 396 aaPredicted RBP8.6□□□□□ -1.03
CHD7-208ENST00000528280 UGT2B17O75795 530 aa8.6□□□□□ -1.03
CHD7-208ENST00000528280 CYP7B1O75881 506 aa8.6□□□□□ -1.03
CHD7-208ENST00000528280 AQP8O94778 261 aa8.6□□□□□ -1.03
CHD7-208ENST00000528280 ANP32DO95626 131 aa8.6□□□□□ -1.03
CHD7-208ENST00000528280 ALDOCP09972 364 aaKnown RBP8.6□□□□□ -1.03
CHD7-208ENST00000528280 ZCCHC18P0CG32 403 aa8.6□□□□□ -1.03
CHD7-208ENST00000528280 UQCRBP14927 111 aa8.6□□□□□ -1.03
CHD7-208ENST00000528280 UGT2B10P36537 528 aa8.6□□□□□ -1.03
CHD7-208ENST00000528280 CPOXP36551 454 aa8.6□□□□□ -1.03
CHD7-208ENST00000528280 HTR3AP46098 478 aa8.6□□□□□ -1.03
CHD7-208ENST00000528280 RAC3P60763 192 aa8.6□□□□□ -1.03
CHD7-208ENST00000528280 RPS26P62854 115 aaKnown RBP8.6□□□□□ -1.03
CHD7-208ENST00000528280 SIRPAP78324 504 aa8.6□□□□□ -1.03
CHD7-208ENST00000528280 KCNJ10P78508 379 aa8.6□□□□□ -1.03
CHD7-208ENST00000528280 FAM27E3Q08E93 113 aa8.6□□□□□ -1.03
CHD7-208ENST00000528280 SELENBP1Q13228 472 aa8.6□□□□□ -1.03
CHD7-208ENST00000528280 QPRTQ15274 297 aa8.6□□□□□ -1.03
CHD7-208ENST00000528280 GUSBP1Q15486 140 aa8.6□□□□□ -1.03
CHD7-208ENST00000528280 CTU2Q2VPK5 515 aaKnown RBP8.6□□□□□ -1.03
CHD7-208ENST00000528280 TMEM176BQ3YBM2 270 aaPredicted RBP8.6□□□□□ -1.03
CHD7-208ENST00000528280 GPAT3Q53EU6 434 aa8.6□□□□□ -1.03
CHD7-208ENST00000528280 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.6□□□□□ -1.03
CHD7-208ENST00000528280 VWA1Q6PCB0 445 aa8.6□□□□□ -1.03
CHD7-208ENST00000528280 CBLN3Q6UW01 205 aa8.6□□□□□ -1.03
CHD7-208ENST00000528280 PLXDC2Q6UX71 529 aa8.6□□□□□ -1.03
CHD7-208ENST00000528280 LRRC74BQ6ZQY2 392 aa8.6□□□□□ -1.03
CHD7-208ENST00000528280 ZNF619Q8N2I2 560 aa8.6□□□□□ -1.03
CHD7-208ENST00000528280 MIER2Q8N344 545 aa8.6□□□□□ -1.03
CHD7-208ENST00000528280 TMCO5AQ8N6Q1 288 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms