RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 A8MXE2 369 aa23.66■■□□□ 1.38
TSPAN4-217ENST00000527644 ETV2O00321 342 aaPredicted RBP23.66■■□□□ 1.38
TSPAN4-217ENST00000527644 CYP7B1O75881 506 aa23.66■■□□□ 1.38
TSPAN4-217ENST00000527644 UBTFL6P0CB48 400 aaPredicted RBP23.66■■□□□ 1.38
TSPAN4-217ENST00000527644 PGM1P36871 562 aa23.66■■□□□ 1.38
TSPAN4-217ENST00000527644 CPA2P48052 419 aa23.66■■□□□ 1.38
TSPAN4-217ENST00000527644 KRTAP10-9P60411 292 aa23.66■■□□□ 1.38
TSPAN4-217ENST00000527644 IRX1P78414 480 aaPredicted RBP23.66■■□□□ 1.38
TSPAN4-217ENST00000527644 SORDQ00796 357 aa23.66■■□□□ 1.38
TSPAN4-217ENST00000527644 QPRTQ15274 297 aa23.66■■□□□ 1.38
TSPAN4-217ENST00000527644 SYPL1Q16563 259 aa23.66■■□□□ 1.38
TSPAN4-217ENST00000527644 HBMQ6B0K9 141 aa23.66■■□□□ 1.38
TSPAN4-217ENST00000527644 DNAJC14Q6Y2X3 702 aaPredicted RBP23.66■■□□□ 1.38
TSPAN4-217ENST00000527644 LRRC74BQ6ZQY2 392 aa23.66■■□□□ 1.38
TSPAN4-217ENST00000527644 ANKFN1Q8N957 763 aa23.66■■□□□ 1.38
TSPAN4-217ENST00000527644 ZG16BQ96DA0 208 aa23.66■■□□□ 1.38
TSPAN4-217ENST00000527644 THUMPD3Q9BV44 507 aaKnown RBP23.66■■□□□ 1.38
TSPAN4-217ENST00000527644 PRRG4Q9BZD6 226 aa23.66■■□□□ 1.38
TSPAN4-217ENST00000527644 ST6GALNAC1Q9NSC7 600 aaPredicted RBP23.66■■□□□ 1.38
TSPAN4-217ENST00000527644 MCTS1Q9ULC4 181 aaKnown RBP23.66■■□□□ 1.38
TSPAN4-217ENST00000527644 TNFSF11O14788 317 aa23.65■■□□□ 1.38
TSPAN4-217ENST00000527644 MSTNO14793 375 aa23.65■■□□□ 1.38
TSPAN4-217ENST00000527644 EFNA2O43921 213 aa23.65■■□□□ 1.38
TSPAN4-217ENST00000527644 CXCL13O43927 109 aa23.65■■□□□ 1.38
TSPAN4-217ENST00000527644 AQP8O94778 261 aa23.65■■□□□ 1.38
TSPAN4-217ENST00000527644 NTN1O95631 604 aa23.65■■□□□ 1.38
TSPAN4-217ENST00000527644 KIR2DL2P43627 348 aaPredicted RBP23.65■■□□□ 1.38
TSPAN4-217ENST00000527644 C6orf10Q5SRN2 563 aa23.65■■□□□ 1.38
TSPAN4-217ENST00000527644 FAM71CQ8NEG0 241 aa23.65■■□□□ 1.38
TSPAN4-217ENST00000527644 FAM222BQ8WU58 562 aa23.65■■□□□ 1.38
TSPAN4-217ENST00000527644 PMM1Q92871 262 aa23.65■■□□□ 1.38
TSPAN4-217ENST00000527644 SLC38A1Q9H2H9 487 aa23.65■■□□□ 1.38
TSPAN4-217ENST00000527644 TPT1P8Q9HAU6 139 aa23.65■■□□□ 1.38
TSPAN4-217ENST00000527644 CRIM1Q9NZV1 1036 aa23.65■■□□□ 1.38
TSPAN4-217ENST00000527644 HEATR5AQ86XA9 2040 aa23.64■■□□□ 1.38
TSPAN4-217ENST00000527644 PDZD2O15018 2839 aa23.64■■□□□ 1.38
TSPAN4-217ENST00000527644 SYNGR4O95473 234 aa23.64■■□□□ 1.37
TSPAN4-217ENST00000527644 NR2F1P10589 423 aa23.64■■□□□ 1.37
TSPAN4-217ENST00000527644 PGCP20142 388 aa23.64■■□□□ 1.37
TSPAN4-217ENST00000527644 MVDP53602 400 aa23.64■■□□□ 1.37
TSPAN4-217ENST00000527644 CARD18P57730 90 aa23.64■■□□□ 1.37
TSPAN4-217ENST00000527644 KCNJ10P78508 379 aa23.64■■□□□ 1.37
TSPAN4-217ENST00000527644 PPP4R4Q6NUP7 873 aa23.64■■□□□ 1.37
TSPAN4-217ENST00000527644 VWA1Q6PCB0 445 aa23.64■■□□□ 1.37
TSPAN4-217ENST00000527644 ZZZ3Q8IYH5 903 aa23.64■■□□□ 1.37
TSPAN4-217ENST00000527644 STON2Q8WXE9 905 aa23.64■■□□□ 1.37
TSPAN4-217ENST00000527644 ST8SIA1Q92185 356 aa23.64■■□□□ 1.37
TSPAN4-217ENST00000527644 GTF2H4Q92759 462 aa23.64■■□□□ 1.37
TSPAN4-217ENST00000527644 OSTF1Q92882 214 aa23.64■■□□□ 1.37
TSPAN4-217ENST00000527644 ZNF524Q96C55 264 aa23.64■■□□□ 1.37
TSPAN4-217ENST00000527644 MTHFD2LQ9H903 347 aaPredicted RBP23.64■■□□□ 1.37
TSPAN4-217ENST00000527644 TIGARQ9NQ88 270 aa23.64■■□□□ 1.37
TSPAN4-217ENST00000527644 TMEM45AQ9NWC5 275 aa23.64■■□□□ 1.37
TSPAN4-217ENST00000527644 GALNT8Q9NY28 637 aa23.64■■□□□ 1.37
TSPAN4-217ENST00000527644 POLQO75417 2590 aa23.64■■□□□ 1.37
TSPAN4-217ENST00000527644 TUBAL3A6NHL2 446 aa23.63■■□□□ 1.37
TSPAN4-217ENST00000527644 AGAP5A6NIR3 686 aa23.63■■□□□ 1.37
TSPAN4-217ENST00000527644 CHRM4P08173 479 aa23.63■■□□□ 1.37
TSPAN4-217ENST00000527644 SFTPDP35247 375 aa23.63■■□□□ 1.37
TSPAN4-217ENST00000527644 CRATP43155 626 aa23.63■■□□□ 1.37
TSPAN4-217ENST00000527644 SLC6A8P48029 635 aa23.63■■□□□ 1.37
TSPAN4-217ENST00000527644 ATP4BP51164 291 aa23.63■■□□□ 1.37
TSPAN4-217ENST00000527644 SELENBP1Q13228 472 aa23.63■■□□□ 1.37
TSPAN4-217ENST00000527644 GUSBP1Q15486 140 aa23.63■■□□□ 1.37
TSPAN4-217ENST00000527644 BLOC1S3Q6QNY0 202 aa23.63■■□□□ 1.37
TSPAN4-217ENST00000527644 BTLAQ7Z6A9 289 aa23.63■■□□□ 1.37
TSPAN4-217ENST00000527644 FUNDC1Q8IVP5 155 aa23.63■■□□□ 1.37
TSPAN4-217ENST00000527644 TMEM234Q8WY98 164 aa23.63■■□□□ 1.37
TSPAN4-217ENST00000527644 QRSL1Q9H0R6 528 aaKnown RBP23.63■■□□□ 1.37
TSPAN4-217ENST00000527644 P2RX2Q9UBL9 471 aa23.63■■□□□ 1.37
TSPAN4-217ENST00000527644 SMNDC1O75940 238 aaKnown RBP eCLIP23.62■■□□□ 1.37
TSPAN4-217ENST00000527644 SHC1P29353 583 aa23.62■■□□□ 1.37
TSPAN4-217ENST00000527644 SIRPAP78324 504 aa23.62■■□□□ 1.37
TSPAN4-217ENST00000527644 TMEM176BQ3YBM2 270 aaPredicted RBP23.62■■□□□ 1.37
TSPAN4-217ENST00000527644 GTDC1Q4AE62 458 aa23.62■■□□□ 1.37
TSPAN4-217ENST00000527644 SLC2A7Q6PXP3 512 aa23.62■■□□□ 1.37
TSPAN4-217ENST00000527644 FAM214BQ7L5A3 538 aa23.62■■□□□ 1.37
TSPAN4-217ENST00000527644 CMIPQ8IY22 773 aa23.62■■□□□ 1.37
TSPAN4-217ENST00000527644 PAIP1Q9H074 479 aaKnown RBP23.62■■□□□ 1.37
TSPAN4-217ENST00000527644 EXOSC3Q9NQT5 275 aaKnown RBP23.62■■□□□ 1.37
TSPAN4-217ENST00000527644 GLRX2Q9NS18 164 aa23.62■■□□□ 1.37
TSPAN4-217ENST00000527644 THUMPD1Q9NXG2 353 aaKnown RBP23.62■■□□□ 1.37
TSPAN4-217ENST00000527644 PCDHB14Q9Y5E9 798 aa23.62■■□□□ 1.37
TSPAN4-217ENST00000527644 CD8BP10966 210 aa23.61■■□□□ 1.37
TSPAN4-217ENST00000527644 ETFAP13804 333 aa23.61■■□□□ 1.37
TSPAN4-217ENST00000527644 PCYT1AP49585 367 aa23.61■■□□□ 1.37
TSPAN4-217ENST00000527644 SESN3P58005 492 aa23.61■■□□□ 1.37
TSPAN4-217ENST00000527644 GNA13Q14344 377 aa23.61■■□□□ 1.37
TSPAN4-217ENST00000527644 GTF2IRD2BQ6EKJ0 949 aa23.61■■□□□ 1.37
TSPAN4-217ENST00000527644 HMGN2P46Q86SG4 172 aa23.61■■□□□ 1.37
TSPAN4-217ENST00000527644 GTF2IRD2Q86UP8 949 aa23.61■■□□□ 1.37
TSPAN4-217ENST00000527644 TMEM200AQ86VY9 491 aa23.61■■□□□ 1.37
TSPAN4-217ENST00000527644 GMPPAQ96IJ6 420 aaPredicted RBP23.61■■□□□ 1.37
TSPAN4-217ENST00000527644 ACER3Q9NUN7 267 aa23.61■■□□□ 1.37
TSPAN4-217ENST00000527644 CALML5Q9NZT1 146 aa23.61■■□□□ 1.37
TSPAN4-217ENST00000527644 CCDC167Q9P0B6 97 aa23.61■■□□□ 1.37
TSPAN4-217ENST00000527644 EMC9Q9Y3B6 208 aa23.61■■□□□ 1.37
TSPAN4-217ENST00000527644 A0A096LPI6 279 aa23.6■■□□□ 1.37
TSPAN4-217ENST00000527644 EDF1O60869 148 aaKnown RBP23.6■■□□□ 1.37
TSPAN4-217ENST00000527644 BCAS1O75363 584 aaPredicted RBP23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms