RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 SFXN2Q96NB2 322 aa11.7□□□□□ -0.54
SMPD1-202ENST00000526280 NPAS1Q99742 590 aa11.7□□□□□ -0.54
SMPD1-202ENST00000526280 PIGQQ9BRB3 760 aa11.7□□□□□ -0.54
SMPD1-202ENST00000526280 SPATA5L1Q9BVQ7 753 aa11.7□□□□□ -0.54
SMPD1-202ENST00000526280 CACYBPQ9HB71 228 aaKnown RBP11.7□□□□□ -0.54
SMPD1-202ENST00000526280 PNPLA3Q9NST1 481 aa11.7□□□□□ -0.54
SMPD1-202ENST00000526280 RLIMQ9NVW2 624 aa11.7□□□□□ -0.54
SMPD1-202ENST00000526280 DNAJB12Q9NXW2 375 aaKnown RBP11.7□□□□□ -0.54
SMPD1-202ENST00000526280 TINAGQ9UJW2 476 aa11.7□□□□□ -0.54
SMPD1-202ENST00000526280 USP22Q9UPT9 525 aa11.7□□□□□ -0.54
SMPD1-202ENST00000526280 TRGV8A0A0C4DH27 118 aa11.69□□□□□ -0.54
SMPD1-202ENST00000526280 OR2M5A3KFT3 312 aa11.69□□□□□ -0.54
SMPD1-202ENST00000526280 FAM220BPB1ANY3 271 aa11.69□□□□□ -0.54
SMPD1-202ENST00000526280 M0QX08 132 aa11.69□□□□□ -0.54
SMPD1-202ENST00000526280 ETV2O00321 342 aaPredicted RBP11.69□□□□□ -0.54
SMPD1-202ENST00000526280 NME4O00746 187 aa11.69□□□□□ -0.54
SMPD1-202ENST00000526280 ADAM11O75078 769 aa11.69□□□□□ -0.54
SMPD1-202ENST00000526280 SERPINB7O75635 380 aa11.69□□□□□ -0.54
SMPD1-202ENST00000526280 MFN2O95140 757 aa11.69□□□□□ -0.54
SMPD1-202ENST00000526280 ESRRAP11474 423 aaPredicted RBP11.69□□□□□ -0.54
SMPD1-202ENST00000526280 CPN1P15169 458 aa11.69□□□□□ -0.54
SMPD1-202ENST00000526280 ZNF17P17021 662 aa11.69□□□□□ -0.54
SMPD1-202ENST00000526280 PGCP20142 388 aa11.69□□□□□ -0.54
SMPD1-202ENST00000526280 CALB2P22676 271 aa11.69□□□□□ -0.54
SMPD1-202ENST00000526280 PSMA4P25789 261 aaKnown RBP11.69□□□□□ -0.54
SMPD1-202ENST00000526280 PRKAR1BP31321 381 aa11.69□□□□□ -0.54
SMPD1-202ENST00000526280 EIF1P41567 113 aaKnown RBP11.69□□□□□ -0.54
SMPD1-202ENST00000526280 SLC6A8P48029 635 aa11.69□□□□□ -0.54
SMPD1-202ENST00000526280 LHX2P50458 406 aa11.69□□□□□ -0.54
SMPD1-202ENST00000526280 CCR4P51679 360 aa11.69□□□□□ -0.54
SMPD1-202ENST00000526280 MNAT1P51948 309 aa11.69□□□□□ -0.54
SMPD1-202ENST00000526280 CASP6P55212 293 aa11.69□□□□□ -0.54
SMPD1-202ENST00000526280 LIPEQ05469 1076 aa11.69□□□□□ -0.54
SMPD1-202ENST00000526280 VEZF1Q14119 521 aa11.69□□□□□ -0.54
SMPD1-202ENST00000526280 SLC25A53Q5H9E4 307 aa11.69□□□□□ -0.54
SMPD1-202ENST00000526280 INTS11Q5TA45 600 aaKnown RBP11.69□□□□□ -0.54
SMPD1-202ENST00000526280 C1QL3Q5VWW1 255 aa11.69□□□□□ -0.54
SMPD1-202ENST00000526280 MYO7BQ6PIF6 2116 aa11.69□□□□□ -0.54
SMPD1-202ENST00000526280 DHRS4L2Q6PKH6 230 aa11.69□□□□□ -0.54
SMPD1-202ENST00000526280 ENPP6Q6UWR7 440 aa11.69□□□□□ -0.54
SMPD1-202ENST00000526280 CCDC80Q76M96 950 aa11.69□□□□□ -0.54
SMPD1-202ENST00000526280 PATL1Q86TB9 770 aaKnown RBP11.69□□□□□ -0.54
SMPD1-202ENST00000526280 CD163Q86VB7 1156 aa11.69□□□□□ -0.54
SMPD1-202ENST00000526280 ZNF440Q8IYI8 595 aa11.69□□□□□ -0.54
SMPD1-202ENST00000526280 OR5M9Q8NGP3 310 aa11.69□□□□□ -0.54
SMPD1-202ENST00000526280 FBXO27Q8NI29 283 aa11.69□□□□□ -0.54
SMPD1-202ENST00000526280 POC1BQ8TC44 478 aa11.69□□□□□ -0.54
SMPD1-202ENST00000526280 WDYHV1Q96HA8 205 aa11.69□□□□□ -0.54
SMPD1-202ENST00000526280 PRDM14Q9GZV8 571 aa11.69□□□□□ -0.54
SMPD1-202ENST00000526280 ARMC7Q9H6L4 198 aa11.69□□□□□ -0.54
SMPD1-202ENST00000526280 ABCD2Q9UBJ2 740 aa11.69□□□□□ -0.54
SMPD1-202ENST00000526280 ZNF337Q9Y3M9 751 aa11.69□□□□□ -0.54
SMPD1-202ENST00000526280 FLNCQ14315 2725 aa11.69□□□□□ -0.54
SMPD1-202ENST00000526280 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.68□□□□□ -0.54
SMPD1-202ENST00000526280 A0A1B0GUH1 482 aa11.68□□□□□ -0.54
SMPD1-202ENST00000526280 ELOVL7A1L3X0 281 aa11.68□□□□□ -0.54
SMPD1-202ENST00000526280 PRORSD1PA6NEY8 169 aa11.68□□□□□ -0.54
SMPD1-202ENST00000526280 SHISA8B8ZZ34 492 aa11.68□□□□□ -0.54
SMPD1-202ENST00000526280 LRRTM2O43300 516 aa11.68□□□□□ -0.54
SMPD1-202ENST00000526280 TPST1O60507 370 aa11.68□□□□□ -0.54
SMPD1-202ENST00000526280 NTN1O95631 604 aa11.68□□□□□ -0.54
SMPD1-202ENST00000526280 PRKCAP17252 672 aa11.68□□□□□ -0.54
SMPD1-202ENST00000526280 ADH6P28332 368 aa11.68□□□□□ -0.54
SMPD1-202ENST00000526280 RYKP34925 604 aa11.68□□□□□ -0.54
SMPD1-202ENST00000526280 STARP49675 285 aa11.68□□□□□ -0.54
SMPD1-202ENST00000526280 EEFSECP57772 596 aaKnown RBP11.68□□□□□ -0.54
SMPD1-202ENST00000526280 QPRTQ15274 297 aa11.68□□□□□ -0.54
SMPD1-202ENST00000526280 BCL2A1Q16548 175 aa11.68□□□□□ -0.54
SMPD1-202ENST00000526280 C4orf17Q53FE4 359 aa11.68□□□□□ -0.54
SMPD1-202ENST00000526280 ZNF585AQ6P3V2 769 aa11.68□□□□□ -0.54
SMPD1-202ENST00000526280 RINLQ6ZS11 566 aa11.68□□□□□ -0.54
SMPD1-202ENST00000526280 ARMC8Q8IUR7 673 aa11.68□□□□□ -0.54
SMPD1-202ENST00000526280 PM20D2Q8IYS1 436 aa11.68□□□□□ -0.54
SMPD1-202ENST00000526280 MICU2Q8IYU8 434 aa11.68□□□□□ -0.54
SMPD1-202ENST00000526280 OR2T12Q8NG77 320 aa11.68□□□□□ -0.54
SMPD1-202ENST00000526280 ST8SIA1Q92185 356 aa11.68□□□□□ -0.54
SMPD1-202ENST00000526280 SLC35B4Q969S0 331 aa11.68□□□□□ -0.54
SMPD1-202ENST00000526280 MRGPRX4Q96LA9 322 aa11.68□□□□□ -0.54
SMPD1-202ENST00000526280 RNF145Q96MT1 663 aa11.68□□□□□ -0.54
SMPD1-202ENST00000526280 BTBD10Q9BSF8 475 aa11.68□□□□□ -0.54
SMPD1-202ENST00000526280 TP63Q9H3D4 680 aaPredicted RBP11.68□□□□□ -0.54
SMPD1-202ENST00000526280 SPAG4Q9NPE6 437 aa11.68□□□□□ -0.54
SMPD1-202ENST00000526280 TMEM181Q9P2C4 612 aa11.68□□□□□ -0.54
SMPD1-202ENST00000526280 SH3BGRL2Q9UJC5 107 aa11.68□□□□□ -0.54
SMPD1-202ENST00000526280 DIDO1Q9BTC0 2240 aaKnown RBP11.67□□□□□ -0.54
SMPD1-202ENST00000526280 AHRRA9YTQ3 701 aa11.67□□□□□ -0.54
SMPD1-202ENST00000526280 FAAHO00519 579 aa11.67□□□□□ -0.54
SMPD1-202ENST00000526280 CCL21O00585 134 aa11.67□□□□□ -0.54
SMPD1-202ENST00000526280 AP3D1O14617 1153 aa11.67□□□□□ -0.54
SMPD1-202ENST00000526280 EFNA2O43921 213 aa11.67□□□□□ -0.54
SMPD1-202ENST00000526280 WDR1O75083 606 aa11.67□□□□□ -0.54
SMPD1-202ENST00000526280 SEMA7AO75326 666 aa11.67□□□□□ -0.54
SMPD1-202ENST00000526280 EPPINO95925 133 aa11.67□□□□□ -0.54
SMPD1-202ENST00000526280 HOXD4P09016 255 aaPredicted RBP11.67□□□□□ -0.54
SMPD1-202ENST00000526280 GKN3PP0CG01 181 aa11.67□□□□□ -0.54
SMPD1-202ENST00000526280 PEPDP12955 493 aa11.67□□□□□ -0.54
SMPD1-202ENST00000526280 GABRA1P14867 456 aa11.67□□□□□ -0.54
SMPD1-202ENST00000526280 ZNF708P17019 499 aa11.67□□□□□ -0.54
SMPD1-202ENST00000526280 POU3F2P20265 443 aaPredicted RBP11.67□□□□□ -0.54
SMPD1-202ENST00000526280 ACVR2AP27037 513 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms