RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 CRLF2Q9HC73 371 aa3.61□□□□□ -1.83
CSDE1-211ENST00000525970 CA5BQ9Y2D0 317 aa3.61□□□□□ -1.83
CSDE1-211ENST00000525970 MRPL11Q9Y3B7 192 aaKnown RBP3.61□□□□□ -1.83
CSDE1-211ENST00000525970 L3MBTL1Q9Y468 752 aa3.61□□□□□ -1.83
CSDE1-211ENST00000525970 NPTNQ9Y639 398 aa3.61□□□□□ -1.83
CSDE1-211ENST00000525970 RPAP1Q9BWH6 1393 aaPredicted RBP3.61□□□□□ -1.83
CSDE1-211ENST00000525970 PPIAL4EA0A075B759 164 aa3.6□□□□□ -1.83
CSDE1-211ENST00000525970 IGHV3OR16-10A0A075B7F0 116 aa3.6□□□□□ -1.83
CSDE1-211ENST00000525970 BTBD17A6NE02 478 aa3.6□□□□□ -1.83
CSDE1-211ENST00000525970 SLC17A2O00624 439 aa3.6□□□□□ -1.83
CSDE1-211ENST00000525970 LRRTM2O43300 516 aa3.6□□□□□ -1.83
CSDE1-211ENST00000525970 CLDN9O95484 217 aa3.6□□□□□ -1.83
CSDE1-211ENST00000525970 ALOX5P09917 674 aa3.6□□□□□ -1.83
CSDE1-211ENST00000525970 HSMCR30P0CW71 290 aa3.6□□□□□ -1.83
CSDE1-211ENST00000525970 PPIAL4FP0DN26 164 aa3.6□□□□□ -1.83
CSDE1-211ENST00000525970 ETS2P15036 469 aa3.6□□□□□ -1.83
CSDE1-211ENST00000525970 ZNF10P21506 573 aaPredicted RBP3.6□□□□□ -1.83
CSDE1-211ENST00000525970 CAPGP40121 348 aa3.6□□□□□ -1.83
CSDE1-211ENST00000525970 CRYBB1P53674 252 aaPredicted RBP3.6□□□□□ -1.83
CSDE1-211ENST00000525970 ATP1B3P54709 279 aa3.6□□□□□ -1.83
CSDE1-211ENST00000525970 RPS14P62263 151 aaKnown RBP3.6□□□□□ -1.83
CSDE1-211ENST00000525970 VLDLRP98155 873 aa3.6□□□□□ -1.83
CSDE1-211ENST00000525970 LRRC66Q68CR7 880 aa3.6□□□□□ -1.83
CSDE1-211ENST00000525970 FAM199XQ6PEV8 388 aaPredicted RBP3.6□□□□□ -1.83
CSDE1-211ENST00000525970 ZNF613Q6PF04 617 aa3.6□□□□□ -1.83
CSDE1-211ENST00000525970 REG3GQ6UW15 175 aa3.6□□□□□ -1.83
CSDE1-211ENST00000525970 LRRC49Q8IUZ0 686 aa3.6□□□□□ -1.83
CSDE1-211ENST00000525970 OR2T33Q8NG76 320 aa3.6□□□□□ -1.83
CSDE1-211ENST00000525970 OR2L3Q8NG85 312 aa3.6□□□□□ -1.83
CSDE1-211ENST00000525970 OR6C4Q8NGE1 309 aa3.6□□□□□ -1.83
CSDE1-211ENST00000525970 KCNG3Q8TAE7 436 aa3.6□□□□□ -1.83
CSDE1-211ENST00000525970 NPRL2Q8WTW4 380 aa3.6□□□□□ -1.83
CSDE1-211ENST00000525970 CELF6Q96J87 481 aaKnown RBP3.6□□□□□ -1.83
CSDE1-211ENST00000525970 SLC45A3Q96JT2 553 aa3.6□□□□□ -1.83
CSDE1-211ENST00000525970 POM121L2Q96KW2 1035 aa3.6□□□□□ -1.83
CSDE1-211ENST00000525970 OR5B2Q96R09 309 aa3.6□□□□□ -1.83
CSDE1-211ENST00000525970 EXO5Q9H790 373 aa3.6□□□□□ -1.83
CSDE1-211ENST00000525970 POLE4Q9NR33 117 aa3.6□□□□□ -1.83
CSDE1-211ENST00000525970 SAMD4AQ9UPU9 718 aaKnown RBP3.6□□□□□ -1.83
CSDE1-211ENST00000525970 ERVW-1Q9UQF0 538 aa3.6□□□□□ -1.83
CSDE1-211ENST00000525970 PPIAL4AQ9Y536 164 aa3.6□□□□□ -1.83
CSDE1-211ENST00000525970 TTC41PQ6P2S7 1318 aa3.6□□□□□ -1.83
CSDE1-211ENST00000525970 A0A075B6Q4 140 aa3.59□□□□□ -1.83
CSDE1-211ENST00000525970 IGKV3D-15A0A087WSY6 115 aa3.59□□□□□ -1.83
CSDE1-211ENST00000525970 GOLGA6L7A0A1B0GV03 622 aa3.59□□□□□ -1.83
CSDE1-211ENST00000525970 A0A1W2PPV9 198 aa3.59□□□□□ -1.83
CSDE1-211ENST00000525970 HEATR9A2RTY3 570 aa3.59□□□□□ -1.83
CSDE1-211ENST00000525970 TRABD2BA6NFA1 517 aa3.59□□□□□ -1.83
CSDE1-211ENST00000525970 LRRIQ4A6NIV6 560 aa3.59□□□□□ -1.83
CSDE1-211ENST00000525970 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.59□□□□□ -1.83
CSDE1-211ENST00000525970 CST1P01037 141 aa3.59□□□□□ -1.83
CSDE1-211ENST00000525970 GAPDHP04406 335 aaKnown RBP3.59□□□□□ -1.83
CSDE1-211ENST00000525970 CD55P08174 381 aa3.59□□□□□ -1.83
CSDE1-211ENST00000525970 ZNF883P0CG24 379 aa3.59□□□□□ -1.83
CSDE1-211ENST00000525970 CT45A10P0DMU9 189 aa3.59□□□□□ -1.83
CSDE1-211ENST00000525970 RFC4P35249 363 aa3.59□□□□□ -1.83
CSDE1-211ENST00000525970 RPL13AP40429 203 aaKnown RBP3.59□□□□□ -1.83
CSDE1-211ENST00000525970 MAP3K8P41279 467 aa3.59□□□□□ -1.83
CSDE1-211ENST00000525970 EPS15P42566 896 aa3.59□□□□□ -1.83
CSDE1-211ENST00000525970 HLCSP50747 726 aa3.59□□□□□ -1.83
CSDE1-211ENST00000525970 TPMTP51580 245 aa3.59□□□□□ -1.83
CSDE1-211ENST00000525970 HSPA2P54652 639 aa3.59□□□□□ -1.83
CSDE1-211ENST00000525970 ENPEPQ07075 957 aa3.59□□□□□ -1.83
CSDE1-211ENST00000525970 BST2Q10589 180 aaKnown RBP3.59□□□□□ -1.83
CSDE1-211ENST00000525970 GK3PQ14409 553 aa3.59□□□□□ -1.83
CSDE1-211ENST00000525970 ARHGAP19Q14CB8 494 aa3.59□□□□□ -1.83
CSDE1-211ENST00000525970 TEX44Q53QW1 395 aa3.59□□□□□ -1.83
CSDE1-211ENST00000525970 C2CD6Q53TS8 623 aa3.59□□□□□ -1.83
CSDE1-211ENST00000525970 ZNF506Q5JVG8 444 aa3.59□□□□□ -1.83
CSDE1-211ENST00000525970 CARD17Q5XLA6 110 aa3.59□□□□□ -1.83
CSDE1-211ENST00000525970 UQCC3Q6UW78 93 aa3.59□□□□□ -1.83
CSDE1-211ENST00000525970 BIVMQ86UB2 503 aa3.59□□□□□ -1.83
CSDE1-211ENST00000525970 TPRA1Q86W33 373 aa3.59□□□□□ -1.83
CSDE1-211ENST00000525970 CATSPER3Q86XQ3 398 aa3.59□□□□□ -1.83
CSDE1-211ENST00000525970 TGIF2LXQ8IUE1 241 aa3.59□□□□□ -1.83
CSDE1-211ENST00000525970 OR2L13Q8N349 312 aa3.59□□□□□ -1.83
CSDE1-211ENST00000525970 GPR137CQ8N3F9 429 aa3.59□□□□□ -1.83
CSDE1-211ENST00000525970 CSNK1G2-AS1Q8NCQ2 148 aa3.59□□□□□ -1.83
CSDE1-211ENST00000525970 MAGEE2Q8TD90 523 aaPredicted RBP3.59□□□□□ -1.83
CSDE1-211ENST00000525970 EFHD2Q96C19 240 aaPredicted RBP3.59□□□□□ -1.83
CSDE1-211ENST00000525970 OPRPNQ99935 248 aaPredicted RBP3.59□□□□□ -1.83
CSDE1-211ENST00000525970 SLC35A5Q9BS91 424 aa3.59□□□□□ -1.83
CSDE1-211ENST00000525970 CHCHD5Q9BSY4 110 aa3.59□□□□□ -1.83
CSDE1-211ENST00000525970 TRIM62Q9BVG3 475 aa3.59□□□□□ -1.83
CSDE1-211ENST00000525970 TSSK1BQ9BXA7 367 aa3.59□□□□□ -1.83
CSDE1-211ENST00000525970 OPN3Q9H1Y3 402 aaPredicted RBP3.59□□□□□ -1.83
CSDE1-211ENST00000525970 JPT2Q9H910 190 aa3.59□□□□□ -1.83
CSDE1-211ENST00000525970 B3GNT2Q9NY97 397 aa3.59□□□□□ -1.83
CSDE1-211ENST00000525970 ANGPTL2Q9UKU9 493 aa3.59□□□□□ -1.83
CSDE1-211ENST00000525970 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.59□□□□□ -1.83
CSDE1-211ENST00000525970 ZNF840PA6NDX5 716 aa3.58□□□□□ -1.84
CSDE1-211ENST00000525970 ACOD1A6NK06 481 aa3.58□□□□□ -1.84
CSDE1-211ENST00000525970 OR2AG2A6NM03 316 aa3.58□□□□□ -1.84
CSDE1-211ENST00000525970 A8MXK9 166 aa3.58□□□□□ -1.84
CSDE1-211ENST00000525970 HAS3O00219 553 aa3.58□□□□□ -1.84
CSDE1-211ENST00000525970 LATO43561 262 aa3.58□□□□□ -1.84
CSDE1-211ENST00000525970 POP4O95707 220 aaKnown RBP3.58□□□□□ -1.84
CSDE1-211ENST00000525970 RENP00797 406 aa3.58□□□□□ -1.84
CSDE1-211ENST00000525970 ANXA8P13928 327 aa3.58□□□□□ -1.84
CSDE1-211ENST00000525970 CCDC130P13994 396 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms