RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 GPA33Q99795 319 aa2.83□□□□□ -1.96
CD44-215ENST00000525241 ZDHHC11Q9H8X9 412 aa2.83□□□□□ -1.96
CD44-215ENST00000525241 DAZ3Q9NR90 486 aaKnown RBP2.83□□□□□ -1.96
CD44-215ENST00000525241 PRO0461Q9UI25 63 aa2.83□□□□□ -1.96
CD44-215ENST00000525241 IFT52Q9Y366 437 aa2.83□□□□□ -1.96
CD44-215ENST00000525241 RAI1Q7Z5J4 1906 aaPredicted RBP2.83□□□□□ -1.96
CD44-215ENST00000525241 ATP10DQ9P241 1426 aa2.83□□□□□ -1.96
CD44-215ENST00000525241 IGKV6D-21A0A0A0MT36 114 aa2.82□□□□□ -1.96
CD44-215ENST00000525241 ABCD4O14678 606 aa2.82□□□□□ -1.96
CD44-215ENST00000525241 CLDN3O15551 220 aa2.82□□□□□ -1.96
CD44-215ENST00000525241 ECI2O75521 394 aa2.82□□□□□ -1.96
CD44-215ENST00000525241 DIRAS3O95661 229 aa2.82□□□□□ -1.96
CD44-215ENST00000525241 AK1P00568 194 aa2.82□□□□□ -1.96
CD44-215ENST00000525241 CALCBP10092 127 aa2.82□□□□□ -1.96
CD44-215ENST00000525241 PGCP20142 388 aa2.82□□□□□ -1.96
CD44-215ENST00000525241 UGT1A5P35504 534 aa2.82□□□□□ -1.96
CD44-215ENST00000525241 BPIFB3P59826 476 aa2.82□□□□□ -1.96
CD44-215ENST00000525241 HTD2P86397 168 aa2.82□□□□□ -1.96
CD44-215ENST00000525241 SLC10A7Q0GE19 358 aa2.82□□□□□ -1.96
CD44-215ENST00000525241 CUL1Q13616 776 aa2.82□□□□□ -1.96
CD44-215ENST00000525241 ARMCX2Q7L311 632 aa2.82□□□□□ -1.96
CD44-215ENST00000525241 C16orf62Q7Z3J2 963 aa2.82□□□□□ -1.96
CD44-215ENST00000525241 GRAMD2AQ8IUY3 354 aa2.82□□□□□ -1.96
CD44-215ENST00000525241 MKXQ8IYA7 352 aa2.82□□□□□ -1.96
CD44-215ENST00000525241 RNF175Q8N4F7 328 aa2.82□□□□□ -1.96
CD44-215ENST00000525241 DCAF4L2Q8NA75 395 aa2.82□□□□□ -1.96
CD44-215ENST00000525241 OR52I1Q8NGK6 324 aa2.82□□□□□ -1.96
CD44-215ENST00000525241 FBXO30Q8TB52 745 aa2.82□□□□□ -1.96
CD44-215ENST00000525241 OR1E3Q8WZA6 343 aa2.82□□□□□ -1.96
CD44-215ENST00000525241 TMEM101Q96IK0 257 aa2.82□□□□□ -1.96
CD44-215ENST00000525241 ARHGDIGQ99819 225 aa2.82□□□□□ -1.96
CD44-215ENST00000525241 KRTAP4-4Q9BYR3 166 aa2.82□□□□□ -1.96
CD44-215ENST00000525241 RWDD1Q9H446 243 aaPredicted RBP2.82□□□□□ -1.96
CD44-215ENST00000525241 NANOGQ9H9S0 305 aa2.82□□□□□ -1.96
CD44-215ENST00000525241 SH2D2AQ9NP31 389 aa2.82□□□□□ -1.96
CD44-215ENST00000525241 ATP8B3O60423 1300 aa2.82□□□□□ -1.96
CD44-215ENST00000525241 IGHV2-70DA0A0C4DH43 119 aa2.81□□□□□ -1.96
CD44-215ENST00000525241 PSMB11A5LHX3 300 aa2.81□□□□□ -1.96
CD44-215ENST00000525241 RGSL1A5PLK6 1076 aa2.81□□□□□ -1.96
CD44-215ENST00000525241 TRIM49D1C9J1S8 452 aa2.81□□□□□ -1.96
CD44-215ENST00000525241 CA1P00915 261 aaPredicted RBP2.81□□□□□ -1.96
CD44-215ENST00000525241 HOXC4P09017 264 aaPredicted RBP2.81□□□□□ -1.96
CD44-215ENST00000525241 RNH1P13489 461 aaKnown RBP2.81□□□□□ -1.96
CD44-215ENST00000525241 ZNF17P17021 662 aa2.81□□□□□ -1.96
CD44-215ENST00000525241 NT5EP21589 574 aa2.81□□□□□ -1.96
CD44-215ENST00000525241 CD1BP29016 333 aa2.81□□□□□ -1.96
CD44-215ENST00000525241 CD86P42081 329 aa2.81□□□□□ -1.96
CD44-215ENST00000525241 APOC4P55056 127 aa2.81□□□□□ -1.96
CD44-215ENST00000525241 NUP107P57740 925 aa2.81□□□□□ -1.96
CD44-215ENST00000525241 TIMM10P62072 90 aa2.81□□□□□ -1.96
CD44-215ENST00000525241 NUCB2P80303 420 aa2.81□□□□□ -1.96
CD44-215ENST00000525241 ZNF658BQ4V348 819 aaPredicted RBP2.81□□□□□ -1.96
CD44-215ENST00000525241 RABGAP1LQ5R372 815 aa2.81□□□□□ -1.96
CD44-215ENST00000525241 CENPLQ8N0S6 344 aaPredicted RBP2.81□□□□□ -1.96
CD44-215ENST00000525241 SVOPLQ8N434 492 aa2.81□□□□□ -1.96
CD44-215ENST00000525241 FADS6Q8N9I5 356 aa2.81□□□□□ -1.96
CD44-215ENST00000525241 C20orf203Q8NBC4 194 aa2.81□□□□□ -1.96
CD44-215ENST00000525241 DENND6BQ8NEG7 585 aa2.81□□□□□ -1.96
CD44-215ENST00000525241 OR51G2Q8NGK0 314 aa2.81□□□□□ -1.96
CD44-215ENST00000525241 PNPT1Q8TCS8 783 aaKnown RBP2.81□□□□□ -1.96
CD44-215ENST00000525241 C4orf36Q96KX1 117 aa2.81□□□□□ -1.96
CD44-215ENST00000525241 EBF4Q9BQW3 602 aa2.81□□□□□ -1.96
CD44-215ENST00000525241 MAGT1Q9H0U3 335 aa2.81□□□□□ -1.96
CD44-215ENST00000525241 MEAF6Q9HAF1 191 aa2.81□□□□□ -1.96
CD44-215ENST00000525241 APMAPQ9HDC9 416 aa2.81□□□□□ -1.96
CD44-215ENST00000525241 WARS2Q9UGM6 360 aaKnown RBP2.81□□□□□ -1.96
CD44-215ENST00000525241 CDH10Q9Y6N8 788 aa2.81□□□□□ -1.96
CD44-215ENST00000525241 FRMPD4Q14CM0 1322 aa2.81□□□□□ -1.96
CD44-215ENST00000525241 PLEKHG1Q9ULL1 1385 aa2.81□□□□□ -1.96
CD44-215ENST00000525241 THSD7BQ9C0I4 1608 aa2.81□□□□□ -1.96
CD44-215ENST00000525241 A0A0G2JRQ6 117 aa2.8□□□□□ -1.96
CD44-215ENST00000525241 GSAPA4D1B5 854 aa2.8□□□□□ -1.96
CD44-215ENST00000525241 RTL8CO15255 209 aa2.8□□□□□ -1.96
CD44-215ENST00000525241 MSH4O15457 936 aa2.8□□□□□ -1.96
CD44-215ENST00000525241 OR1F1O43749 312 aa2.8□□□□□ -1.96
CD44-215ENST00000525241 HCN1O60741 890 aa2.8□□□□□ -1.96
CD44-215ENST00000525241 UGT2B17O75795 530 aa2.8□□□□□ -1.96
CD44-215ENST00000525241 NEBLO76041 1014 aa2.8□□□□□ -1.96
CD44-215ENST00000525241 SLITRK3O94933 977 aa2.8□□□□□ -1.96
CD44-215ENST00000525241 GNA14O95837 355 aa2.8□□□□□ -1.96
CD44-215ENST00000525241 LALBAP00709 142 aa2.8□□□□□ -1.96
CD44-215ENST00000525241 PRB2P02812 416 aaPredicted RBP2.8□□□□□ -1.96
CD44-215ENST00000525241 NCF1P14598 390 aaPredicted RBP2.8□□□□□ -1.96
CD44-215ENST00000525241 CALB2P22676 271 aa2.8□□□□□ -1.96
CD44-215ENST00000525241 HLCSP50747 726 aa2.8□□□□□ -1.96
CD44-215ENST00000525241 PLA2G16P53816 162 aa2.8□□□□□ -1.96
CD44-215ENST00000525241 CSTF1Q05048 431 aaKnown RBP2.8□□□□□ -1.96
CD44-215ENST00000525241 CHRNB3Q05901 458 aa2.8□□□□□ -1.96
CD44-215ENST00000525241 LCE3AQ5TA76 89 aa2.8□□□□□ -1.96
CD44-215ENST00000525241 KRTAP5-4Q6L8H1 288 aa2.8□□□□□ -1.96
CD44-215ENST00000525241 ARCQ7LC44 396 aa2.8□□□□□ -1.96
CD44-215ENST00000525241 KIAA1328Q86T90 577 aa2.8□□□□□ -1.96
CD44-215ENST00000525241 ZNF573Q86YE8 665 aa2.8□□□□□ -1.96
CD44-215ENST00000525241 NRMQ8IXM6 262 aa2.8□□□□□ -1.96
CD44-215ENST00000525241 KIR3DL3Q8N743 410 aa2.8□□□□□ -1.96
CD44-215ENST00000525241 CCDC110Q8TBZ0 833 aa2.8□□□□□ -1.96
CD44-215ENST00000525241 FAM104AQ969W3 186 aa2.8□□□□□ -1.96
CD44-215ENST00000525241 C12orf66Q96MD2 445 aa2.8□□□□□ -1.96
CD44-215ENST00000525241 KLHDC3Q9BQ90 382 aa2.8□□□□□ -1.96
CD44-215ENST00000525241 ZNF416Q9BWM5 594 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms