RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	MEX3A	A1L020	520 aa	Known RBP	3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	MTMR11	A4FU01	709 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	C5orf60	A6NFR6	353 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	IQCF5	A8MTL0	148 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	TMCO5B	A8MYB1	307 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	C2CD4D	B7Z1M9	353 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356		H0YL77	283 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	TEX46	H3BTG2	121 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356		I6L893	689 aa	Predicted RBP	3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	MDM4	O15151	490 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	EIF3H	O15372	352 aa	Known RBP eCLIP	3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	SCGN	O76038	276 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	SMC2	O95347	1197 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	ECD	O95905	644 aa	Predicted RBP	3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	CST1	P01037	141 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	MB	P02144	154 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	FTH1	P02794	183 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	VTN	P04004	478 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	H1F0	P07305	194 aa	Known RBP	3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	ZNF286B	P0CG31	522 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	PPIAL4G	P0DN37	164 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	MCF2	P10911	925 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	FCGR1A	P12314	374 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	GPX3	P22352	226 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	PSMA2	P25787	234 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	CALML3	P27482	149 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	SPAM1	P38567	509 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	ACADSB	P45954	432 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	GPR4	P46093	362 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	NDST1	P52848	882 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	CDH6	P55285	790 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	B3GALT5-AS1	P59052	145 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	ISL1	P61371	349 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	RAB11A	P62491	216 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	MRPS15	P82914	257 aa	Known RBP	3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	KLC1	Q07866	573 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	TRAP1	Q12931	704 aa	Known RBP	3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	CEACAM7	Q14002	265 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	STK38	Q15208	465 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	ANGPT1	Q15389	498 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	OR1C1	Q15619	314 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	RAB11B	Q15907	218 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	SYPL1	Q16563	259 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	DUOXA1	Q1HG43	343 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	ZNF718	Q3SXZ3	478 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	GGTA1P	Q4G0N0	100 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	CLEC6A	Q6EIG7	209 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	SLC25A25	Q6KCM7	469 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	TTC23L	Q6PF05	361 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	SSX9	Q7RTT3	188 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	VPS36	Q86VN1	386 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	PTOV1	Q86YD1	416 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	TGIF2LX	Q8IUE1	241 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	SLC38A6	Q8IZM9	456 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	SLC7A5P1	Q8MH63	180 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	FAM58A	Q8N1B3	248 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	PARP8	Q8N3A8	854 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	ALLC	Q8N6M5	410 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	DNAAF3	Q8N9W5	541 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	SUMF1	Q8NBK3	374 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	CCDC197	Q8NCU1	140 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	PPFIBP2	Q8ND30	876 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	DDHD1	Q8NEL9	900 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	NFAM1	Q8NET5	270 aa	Predicted RBP	3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	CD300LF	Q8TDQ1	290 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	CCDC12	Q8WUD4	166 aa	Predicted RBP	3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	SCFD1	Q8WVM8	642 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	ELMO1	Q92556	727 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	NRGN	Q92686	78 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	SLCO2A1	Q92959	643 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	LHX4	Q969G2	390 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	PHF21A	Q96BD5	680 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	ZNF689	Q96CS4	500 aa	Predicted RBP	3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	BPIFA2	Q96DR5	249 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	PELI1	Q96FA3	418 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	SH3YL1	Q96HL8	342 aa	Predicted RBP	3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	AMDHD1	Q96NU7	426 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	TAAR1	Q96RJ0	339 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	CYTH2	Q99418	400 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	RIT2	Q99578	217 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	ACBD6	Q9BR61	282 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	LRMDA	Q9H2I8	198 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	CPVL	Q9H3G5	476 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	PCDH9	Q9HC56	1237 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	SLC38A7	Q9NVC3	462 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	HIF1AN	Q9NWT6	349 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	MTCH1	Q9NZJ7	389 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	CTSF	Q9UBX1	484 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	LCMT1	Q9UIC8	334 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	VANGL2	Q9ULK5	521 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	STAP1	Q9ULZ2	295 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	STUB1	Q9UNE7	303 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	SRPRB	Q9Y5M8	271 aa	Known RBP	3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	COLEC10	Q9Y6Z7	277 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	FOCAD	Q5VW36	1801 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	ZZEF1	O43149	2961 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	ATG2A	Q2TAZ0	1938 aa		3.76	□□□□□ -1.81
PCM1-223	ENST00000524356	UNC79	Q9P2D8	2635 aa		3.75	□□□□□ -1.81
PCM1-223	ENST00000524356	ZBED9	Q6R2W3	1325 aa		3.75	□□□□□ -1.81

Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms