RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 NOL11Q9H8H0 719 aaKnown RBP12.01□□□□□ -0.49
NKX3-1-202ENST00000523261 C3orf14Q9HBI5 128 aa12.01□□□□□ -0.49
NKX3-1-202ENST00000523261 FARSBQ9NSD9 589 aaKnown RBP12.01□□□□□ -0.49
NKX3-1-202ENST00000523261 TREM2Q9NZC2 230 aa12.01□□□□□ -0.49
NKX3-1-202ENST00000523261 EMC3Q9P0I2 261 aa12.01□□□□□ -0.49
NKX3-1-202ENST00000523261 SAGP10523 405 aaPredicted RBP12□□□□□ -0.49
NKX3-1-202ENST00000523261 GFAPP14136 432 aa12□□□□□ -0.49
NKX3-1-202ENST00000523261 ARL1P40616 181 aaPredicted RBP12□□□□□ -0.49
NKX3-1-202ENST00000523261 LMO4P61968 165 aa12□□□□□ -0.49
NKX3-1-202ENST00000523261 IL1RL1Q01638 556 aa12□□□□□ -0.49
NKX3-1-202ENST00000523261 IFT88Q13099 833 aa12□□□□□ -0.49
NKX3-1-202ENST00000523261 TRAF3Q13114 568 aa12□□□□□ -0.49
NKX3-1-202ENST00000523261 C1QTNF12Q5T7M4 302 aa12□□□□□ -0.49
NKX3-1-202ENST00000523261 C9orf135Q5VTT2 229 aa12□□□□□ -0.49
NKX3-1-202ENST00000523261 VHLLQ6RSH7 139 aa12□□□□□ -0.49
NKX3-1-202ENST00000523261 ZAR1Q86SH2 424 aa12□□□□□ -0.49
NKX3-1-202ENST00000523261 C1QL4Q86Z23 238 aa12□□□□□ -0.49
NKX3-1-202ENST00000523261 MISPQ8IVT2 679 aa12□□□□□ -0.49
NKX3-1-202ENST00000523261 OR2L13Q8N349 312 aa12□□□□□ -0.49
NKX3-1-202ENST00000523261 SYT14Q8NB59 555 aa12□□□□□ -0.49
NKX3-1-202ENST00000523261 C1orf162Q8NEQ5 155 aaPredicted RBP12□□□□□ -0.49
NKX3-1-202ENST00000523261 OR52E4Q8NGH9 312 aa12□□□□□ -0.49
NKX3-1-202ENST00000523261 RNF217Q8TC41 542 aa12□□□□□ -0.49
NKX3-1-202ENST00000523261 GRK7Q8WTQ7 553 aa12□□□□□ -0.49
NKX3-1-202ENST00000523261 LRRC58Q96CX6 371 aa12□□□□□ -0.49
NKX3-1-202ENST00000523261 DUX5Q96PT3 197 aa12□□□□□ -0.49
NKX3-1-202ENST00000523261 BBS4Q96RK4 519 aa12□□□□□ -0.49
NKX3-1-202ENST00000523261 RBBP8Q99708 897 aa12□□□□□ -0.49
NKX3-1-202ENST00000523261 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12□□□□□ -0.49
NKX3-1-202ENST00000523261 PDP1Q9P0J1 537 aaPredicted RBP12□□□□□ -0.49
NKX3-1-202ENST00000523261 NOSIPQ9Y314 301 aaKnown RBP12□□□□□ -0.49
NKX3-1-202ENST00000523261 GPC6Q9Y625 555 aaPredicted RBP12□□□□□ -0.49
NKX3-1-202ENST00000523261 IGHV1-18A0A0C4DH31 117 aa11.99□□□□□ -0.49
NKX3-1-202ENST00000523261 ZNF716A6NP11 495 aa11.99□□□□□ -0.49
NKX3-1-202ENST00000523261 SYCE1LA8MT33 242 aa11.99□□□□□ -0.49
NKX3-1-202ENST00000523261 CXorf49A8MYA2 514 aaPredicted RBP11.99□□□□□ -0.49
NKX3-1-202ENST00000523261 MYO1GB0I1T2 1018 aa11.99□□□□□ -0.49
NKX3-1-202ENST00000523261 hCG_2039718K7EN88 272 aa11.99□□□□□ -0.49
NKX3-1-202ENST00000523261 PRSS23O95084 383 aa11.99□□□□□ -0.49
NKX3-1-202ENST00000523261 FSHBP01225 129 aa11.99□□□□□ -0.49
NKX3-1-202ENST00000523261 JUNP05412 331 aaKnown RBP11.99□□□□□ -0.49
NKX3-1-202ENST00000523261 IVDP26440 423 aa11.99□□□□□ -0.49
NKX3-1-202ENST00000523261 SLC1A3P43003 542 aa11.99□□□□□ -0.49
NKX3-1-202ENST00000523261 GPR6P46095 362 aaPredicted RBP11.99□□□□□ -0.49
NKX3-1-202ENST00000523261 CCNG1P51959 295 aa11.99□□□□□ -0.49
NKX3-1-202ENST00000523261 PRPS1P60891 318 aa11.99□□□□□ -0.49
NKX3-1-202ENST00000523261 ZNF117Q03924 483 aa11.99□□□□□ -0.49
NKX3-1-202ENST00000523261 SELENBP1Q13228 472 aa11.99□□□□□ -0.49
NKX3-1-202ENST00000523261 FASTKD3Q14CZ7 662 aaKnown RBP11.99□□□□□ -0.49
NKX3-1-202ENST00000523261 PDK3Q15120 406 aa11.99□□□□□ -0.49
NKX3-1-202ENST00000523261 PPP1R7Q15435 360 aa11.99□□□□□ -0.49
NKX3-1-202ENST00000523261 ADRM1Q16186 407 aa11.99□□□□□ -0.49
NKX3-1-202ENST00000523261 ABLIM2Q6H8Q1 611 aa11.99□□□□□ -0.49
NKX3-1-202ENST00000523261 CMC1Q7Z7K0 106 aa11.99□□□□□ -0.49
NKX3-1-202ENST00000523261 SIGLECL1Q8N7X8 197 aa11.99□□□□□ -0.49
NKX3-1-202ENST00000523261 ZNF527Q8NB42 609 aa11.99□□□□□ -0.49
NKX3-1-202ENST00000523261 NANPQ8TBE9 248 aa11.99□□□□□ -0.49
NKX3-1-202ENST00000523261 DVL3Q92997 716 aaPredicted RBP11.99□□□□□ -0.49
NKX3-1-202ENST00000523261 ATP6V1E2Q96A05 226 aa11.99□□□□□ -0.49
NKX3-1-202ENST00000523261 MS4A14Q96JA4 679 aa11.99□□□□□ -0.49
NKX3-1-202ENST00000523261 ELOVL6Q9H5J4 265 aa11.99□□□□□ -0.49
NKX3-1-202ENST00000523261 SLC52A3Q9NQ40 469 aa11.99□□□□□ -0.49
NKX3-1-202ENST00000523261 DDX18Q9NVP1 670 aaKnown RBP11.99□□□□□ -0.49
NKX3-1-202ENST00000523261 DCTN4Q9UJW0 460 aa11.99□□□□□ -0.49
NKX3-1-202ENST00000523261 CORINQ9Y5Q5 1042 aa11.99□□□□□ -0.49
NKX3-1-202ENST00000523261 TMEM129A0AVI4 362 aa11.98□□□□□ -0.49
NKX3-1-202ENST00000523261 DNAJC9-AS1A6NH13 148 aa11.98□□□□□ -0.49
NKX3-1-202ENST00000523261 TTC36A6NLP5 189 aa11.98□□□□□ -0.49
NKX3-1-202ENST00000523261 OIP5O43482 229 aa11.98□□□□□ -0.49
NKX3-1-202ENST00000523261 SLITRK5O94991 958 aa11.98□□□□□ -0.49
NKX3-1-202ENST00000523261 H6PDO95479 791 aa11.98□□□□□ -0.49
NKX3-1-202ENST00000523261 WNT11O96014 354 aa11.98□□□□□ -0.49
NKX3-1-202ENST00000523261 PDYNP01213 254 aa11.98□□□□□ -0.49
NKX3-1-202ENST00000523261 MDKP21741 143 aaPredicted RBP11.98□□□□□ -0.49
NKX3-1-202ENST00000523261 FPR2P25090 351 aa11.98□□□□□ -0.49
NKX3-1-202ENST00000523261 MAP3K8P41279 467 aa11.98□□□□□ -0.49
NKX3-1-202ENST00000523261 SRSF4Q08170 494 aaKnown RBP11.98□□□□□ -0.49
NKX3-1-202ENST00000523261 TOMM34Q15785 309 aaPredicted RBP11.98□□□□□ -0.49
NKX3-1-202ENST00000523261 PRSS53Q2L4Q9 553 aa11.98□□□□□ -0.49
NKX3-1-202ENST00000523261 IKBIPQ70UQ0 350 aa11.98□□□□□ -0.49
NKX3-1-202ENST00000523261 FBXO36Q8NEA4 188 aa11.98□□□□□ -0.49
NKX3-1-202ENST00000523261 RHEBL1Q8TAI7 183 aa11.98□□□□□ -0.49
NKX3-1-202ENST00000523261 GPR151Q8TDV0 419 aa11.98□□□□□ -0.49
NKX3-1-202ENST00000523261 TAF15Q92804 592 aaKnown RBP eCLIP11.98□□□□□ -0.49
NKX3-1-202ENST00000523261 ZNF524Q96C55 264 aa11.98□□□□□ -0.49
NKX3-1-202ENST00000523261 C1orf147Q96MC9 270 aaPredicted RBP11.98□□□□□ -0.49
NKX3-1-202ENST00000523261 SLC38A2Q96QD8 506 aa11.98□□□□□ -0.49
NKX3-1-202ENST00000523261 KCNS3Q9BQ31 491 aa11.98□□□□□ -0.49
NKX3-1-202ENST00000523261 KATNB1Q9BVA0 655 aa11.98□□□□□ -0.49
NKX3-1-202ENST00000523261 ZMAT3Q9HA38 289 aaKnown RBP11.98□□□□□ -0.49
NKX3-1-202ENST00000523261 BRF2Q9HAW0 419 aa11.98□□□□□ -0.49
NKX3-1-202ENST00000523261 TNPO3Q9Y5L0 923 aaKnown RBP11.98□□□□□ -0.49
NKX3-1-202ENST00000523261 ACTL7BQ9Y614 415 aa11.98□□□□□ -0.49
NKX3-1-202ENST00000523261 A0A1W2PQD3 144 aa11.97□□□□□ -0.49
NKX3-1-202ENST00000523261 KLF11O14901 512 aa11.97□□□□□ -0.49
NKX3-1-202ENST00000523261 NKX2-2O95096 273 aa11.97□□□□□ -0.49
NKX3-1-202ENST00000523261 CRYAAP02489 173 aa11.97□□□□□ -0.49
NKX3-1-202ENST00000523261 PRKCAP17252 672 aa11.97□□□□□ -0.49
NKX3-1-202ENST00000523261 FNTAP49354 379 aa11.97□□□□□ -0.49
NKX3-1-202ENST00000523261 NCBP2P52298 156 aaKnown RBP eCLIP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms