RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 VWC2LB2RUY7 222 aa5.86□□□□□ -1.47
SDCBP-210ENST00000522843 SHISA9B4DS77 424 aa5.86□□□□□ -1.47
SDCBP-210ENST00000522843 CDC7O00311 574 aa5.86□□□□□ -1.47
SDCBP-210ENST00000522843 COPEO14579 308 aa5.86□□□□□ -1.47
SDCBP-210ENST00000522843 ICOSLGO75144 302 aa5.86□□□□□ -1.47
SDCBP-210ENST00000522843 GLRA3O75311 464 aa5.86□□□□□ -1.47
SDCBP-210ENST00000522843 PEX14O75381 377 aa5.86□□□□□ -1.47
SDCBP-210ENST00000522843 LY6HO94772 140 aa5.86□□□□□ -1.47
SDCBP-210ENST00000522843 AQP8O94778 261 aa5.86□□□□□ -1.47
SDCBP-210ENST00000522843 KLHL2O95198 593 aa5.86□□□□□ -1.47
SDCBP-210ENST00000522843 AIFM1O95831 613 aa5.86□□□□□ -1.47
SDCBP-210ENST00000522843 GUCA1CO95843 209 aa5.86□□□□□ -1.47
SDCBP-210ENST00000522843 FAM107AO95990 144 aa5.86□□□□□ -1.47
SDCBP-210ENST00000522843 CT62P0C5K7 136 aa5.86□□□□□ -1.47
SDCBP-210ENST00000522843 COX7A2P14406 83 aa5.86□□□□□ -1.47
SDCBP-210ENST00000522843 TAC1P20366 129 aa5.86□□□□□ -1.47
SDCBP-210ENST00000522843 USF1P22415 310 aaPredicted RBP5.86□□□□□ -1.47
SDCBP-210ENST00000522843 TCEA1P23193 301 aaKnown RBP5.86□□□□□ -1.47
SDCBP-210ENST00000522843 ATP5A1P25705 553 aaKnown RBP5.86□□□□□ -1.47
SDCBP-210ENST00000522843 ZFP36P26651 326 aaKnown RBP5.86□□□□□ -1.47
SDCBP-210ENST00000522843 ABCD3P28288 659 aa5.86□□□□□ -1.47
SDCBP-210ENST00000522843 SLC6A8P48029 635 aa5.86□□□□□ -1.47
SDCBP-210ENST00000522843 GZMKP49863 264 aa5.86□□□□□ -1.47
SDCBP-210ENST00000522843 PRKAA2P54646 552 aa5.86□□□□□ -1.47
SDCBP-210ENST00000522843 CDKN2DP55273 166 aa5.86□□□□□ -1.47
SDCBP-210ENST00000522843 NRG3P56975 720 aa5.86□□□□□ -1.47
SDCBP-210ENST00000522843 TAS2R39P59534 338 aa5.86□□□□□ -1.47
SDCBP-210ENST00000522843 RAB10P61026 200 aa5.86□□□□□ -1.47
SDCBP-210ENST00000522843 DUSP2Q05923 314 aa5.86□□□□□ -1.47
SDCBP-210ENST00000522843 TSC22D1Q15714 1073 aa5.86□□□□□ -1.47
SDCBP-210ENST00000522843 PDCD2Q16342 344 aaPredicted RBP5.86□□□□□ -1.47
SDCBP-210ENST00000522843 PDK4Q16654 411 aa5.86□□□□□ -1.47
SDCBP-210ENST00000522843 TIGD2Q4W5G0 525 aa5.86□□□□□ -1.47
SDCBP-210ENST00000522843 MIDNQ504T8 468 aa5.86□□□□□ -1.47
SDCBP-210ENST00000522843 TMEM81Q6P7N7 255 aa5.86□□□□□ -1.47
SDCBP-210ENST00000522843 CLEC2AQ6UVW9 174 aa5.86□□□□□ -1.47
SDCBP-210ENST00000522843 SCIMPQ6UWF3 145 aa5.86□□□□□ -1.47
SDCBP-210ENST00000522843 TMIGD1Q6UXZ0 262 aa5.86□□□□□ -1.47
SDCBP-210ENST00000522843 SLC29A4Q7RTT9 530 aa5.86□□□□□ -1.47
SDCBP-210ENST00000522843 PIGWQ7Z7B1 504 aa5.86□□□□□ -1.47
SDCBP-210ENST00000522843 IFNEQ86WN2 208 aa5.86□□□□□ -1.47
SDCBP-210ENST00000522843 GPSM1Q86YR5 675 aa5.86□□□□□ -1.47
SDCBP-210ENST00000522843 TAGAPQ8N103 731 aa5.86□□□□□ -1.47
SDCBP-210ENST00000522843 C4orf33Q8N1A6 199 aa5.86□□□□□ -1.47
SDCBP-210ENST00000522843 C3orf56Q8N813 242 aa5.86□□□□□ -1.47
SDCBP-210ENST00000522843 ZNF615Q8N8J6 731 aa5.86□□□□□ -1.47
SDCBP-210ENST00000522843 ACOT4Q8N9L9 421 aa5.86□□□□□ -1.47
SDCBP-210ENST00000522843 CCT6BQ92526 530 aa5.86□□□□□ -1.47
SDCBP-210ENST00000522843 S100PBPQ96BU1 408 aa5.86□□□□□ -1.47
SDCBP-210ENST00000522843 LINGO1Q96FE5 620 aa5.86□□□□□ -1.47
SDCBP-210ENST00000522843 CCT8L2Q96SF2 557 aa5.86□□□□□ -1.47
SDCBP-210ENST00000522843 SORBS1Q9BX66 1292 aaKnown RBP5.86□□□□□ -1.47
SDCBP-210ENST00000522843 CACNG6Q9BXT2 260 aa5.86□□□□□ -1.47
SDCBP-210ENST00000522843 PLSCR4Q9NRQ2 329 aa5.86□□□□□ -1.47
SDCBP-210ENST00000522843 SNX15Q9NRS6 342 aa5.86□□□□□ -1.47
SDCBP-210ENST00000522843 TAS2R10Q9NYW0 307 aa5.86□□□□□ -1.47
SDCBP-210ENST00000522843 ACOT9Q9Y305 439 aa5.86□□□□□ -1.47
SDCBP-210ENST00000522843 PCNX3Q9H6A9 2034 aa5.86□□□□□ -1.47
SDCBP-210ENST00000522843 A0A096LPK6 155 aa5.85□□□□□ -1.47
SDCBP-210ENST00000522843 IGHV4-61A0A0C4DH41 118 aa5.85□□□□□ -1.47
SDCBP-210ENST00000522843 OR6C76A6NM76 312 aa5.85□□□□□ -1.47
SDCBP-210ENST00000522843 KIAA0513O60268 411 aa5.85□□□□□ -1.47
SDCBP-210ENST00000522843 PLIN3O60664 434 aa5.85□□□□□ -1.47
SDCBP-210ENST00000522843 UGT2B11O75310 529 aa5.85□□□□□ -1.47
SDCBP-210ENST00000522843 SPAG7O75391 227 aa5.85□□□□□ -1.47
SDCBP-210ENST00000522843 CBR3O75828 277 aa5.85□□□□□ -1.47
SDCBP-210ENST00000522843 SCELO95171 688 aa5.85□□□□□ -1.47
SDCBP-210ENST00000522843 TGDSO95455 350 aa5.85□□□□□ -1.47
SDCBP-210ENST00000522843 BPGMP07738 259 aa5.85□□□□□ -1.47
SDCBP-210ENST00000522843 LTA4HP09960 611 aaKnown RBP5.85□□□□□ -1.47
SDCBP-210ENST00000522843 HIST1H2AGP0C0S8 130 aaPredicted RBP5.85□□□□□ -1.47
SDCBP-210ENST00000522843 SLC35E2BP0CK96 405 aa5.85□□□□□ -1.47
SDCBP-210ENST00000522843 CCDC166P0CW27 439 aa5.85□□□□□ -1.47
SDCBP-210ENST00000522843 C1GALT1C1LP0DN25 315 aa5.85□□□□□ -1.47
SDCBP-210ENST00000522843 ALOX15P16050 662 aaPredicted RBP5.85□□□□□ -1.47
SDCBP-210ENST00000522843 STMN1P16949 149 aa5.85□□□□□ -1.47
SDCBP-210ENST00000522843 CD22P20273 847 aa5.85□□□□□ -1.47
SDCBP-210ENST00000522843 HIST1H2ADP20671 130 aa5.85□□□□□ -1.47
SDCBP-210ENST00000522843 DRD4P21917 467 aa5.85□□□□□ -1.47
SDCBP-210ENST00000522843 SRD5A2P31213 254 aa5.85□□□□□ -1.47
SDCBP-210ENST00000522843 AP1S2P56377 157 aa5.85□□□□□ -1.47
SDCBP-210ENST00000522843 LGALS4P56470 323 aa5.85□□□□□ -1.47
SDCBP-210ENST00000522843 CLDN20P56880 219 aa5.85□□□□□ -1.47
SDCBP-210ENST00000522843 DSCR9P59020 149 aa5.85□□□□□ -1.47
SDCBP-210ENST00000522843 GNGT1P63211 74 aa5.85□□□□□ -1.47
SDCBP-210ENST00000522843 BSPH1Q075Z2 132 aa5.85□□□□□ -1.47
SDCBP-210ENST00000522843 ACAP2Q15057 778 aa5.85□□□□□ -1.47
SDCBP-210ENST00000522843 PON3Q15166 354 aa5.85□□□□□ -1.47
SDCBP-210ENST00000522843 TAB1Q15750 504 aa5.85□□□□□ -1.47
SDCBP-210ENST00000522843 NNATQ16517 81 aa5.85□□□□□ -1.47
SDCBP-210ENST00000522843 BCL2A1Q16548 175 aa5.85□□□□□ -1.47
SDCBP-210ENST00000522843 NRF1Q16656 503 aa5.85□□□□□ -1.47
SDCBP-210ENST00000522843 PPP1R3AQ16821 1122 aa5.85□□□□□ -1.47
SDCBP-210ENST00000522843 RBM20Q5T481 1227 aaKnown RBP5.85□□□□□ -1.47
SDCBP-210ENST00000522843 HHATQ5VTY9 493 aa5.85□□□□□ -1.47
SDCBP-210ENST00000522843 C18orf63Q68DL7 685 aa5.85□□□□□ -1.47
SDCBP-210ENST00000522843 FAM45BPQ6NSW5 357 aa5.85□□□□□ -1.47
SDCBP-210ENST00000522843 SLC30A6Q6NXT4 461 aa5.85□□□□□ -1.47
SDCBP-210ENST00000522843 GLB1L2Q8IW92 636 aa5.85□□□□□ -1.47
SDCBP-210ENST00000522843 UBQLNLQ8IYU4 475 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms