RNA–Protein interactions for RNA: ENST00000521327.1

SPARC-203, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 864 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-203ENST00000521327 TSSK3Q96PN8 268 aa11.96□□□□□ -0.49
SPARC-203ENST00000521327 ZNF300Q96RE9 604 aaPredicted RBP11.96□□□□□ -0.49
SPARC-203ENST00000521327 FMO2Q99518 471 aa11.96□□□□□ -0.49
SPARC-203ENST00000521327 DHRS9Q9BPW9 319 aa11.96□□□□□ -0.49
SPARC-203ENST00000521327 REEP4Q9H6H4 257 aa11.96□□□□□ -0.49
SPARC-203ENST00000521327 TNFRSF12AQ9NP84 129 aa11.96□□□□□ -0.49
SPARC-203ENST00000521327 CCL27Q9Y4X3 112 aa11.96□□□□□ -0.49
SPARC-203ENST00000521327 ACTL7BQ9Y614 415 aa11.96□□□□□ -0.49
SPARC-203ENST00000521327 ANK2Q01484 3957 aa11.95□□□□□ -0.5
SPARC-203ENST00000521327 OR5H1A6NKK0 313 aa11.95□□□□□ -0.5
SPARC-203ENST00000521327 NPIPB8E9PQR5 432 aa11.95□□□□□ -0.5
SPARC-203ENST00000521327 H3BNH8 94 aa11.95□□□□□ -0.5
SPARC-203ENST00000521327 SMAD9O15198 467 aaKnown RBP11.95□□□□□ -0.5
SPARC-203ENST00000521327 LMX1BO60663 402 aa11.95□□□□□ -0.5
SPARC-203ENST00000521327 HSPA4LO95757 839 aa11.95□□□□□ -0.5
SPARC-203ENST00000521327 IGHV4-31P0DP07 118 aa11.95□□□□□ -0.5
SPARC-203ENST00000521327 ZNF16P17020 682 aaPredicted RBP11.95□□□□□ -0.5
SPARC-203ENST00000521327 GCAP28676 217 aa11.95□□□□□ -0.5
SPARC-203ENST00000521327 FABP6P51161 128 aa11.95□□□□□ -0.5
SPARC-203ENST00000521327 ZNF83P51522 516 aa11.95□□□□□ -0.5
SPARC-203ENST00000521327 ETF1P62495 437 aaKnown RBP11.95□□□□□ -0.5
SPARC-203ENST00000521327 CHRNEQ04844 493 aa11.95□□□□□ -0.5
SPARC-203ENST00000521327 SPOCK1Q08629 439 aa11.95□□□□□ -0.5
SPARC-203ENST00000521327 ARL13AQ5H913 290 aaPredicted RBP11.95□□□□□ -0.5
SPARC-203ENST00000521327 EXOSC6Q5RKV6 272 aaKnown RBP11.95□□□□□ -0.5
SPARC-203ENST00000521327 TMEM108Q6UXF1 575 aa11.95□□□□□ -0.5
SPARC-203ENST00000521327 GALNT5Q7Z7M9 940 aa11.95□□□□□ -0.5
SPARC-203ENST00000521327 ZNF433Q8N7K0 673 aaPredicted RBP11.95□□□□□ -0.5
SPARC-203ENST00000521327 OR52N5Q8NH56 324 aa11.95□□□□□ -0.5
SPARC-203ENST00000521327 CLHC1Q8NHS4 586 aa11.95□□□□□ -0.5
SPARC-203ENST00000521327 RFWD2Q8NHY2 731 aa11.95□□□□□ -0.5
SPARC-203ENST00000521327 C10orf105Q8TEF2 133 aa11.95□□□□□ -0.5
SPARC-203ENST00000521327 ZNF75CPQ92670 426 aaPredicted RBP11.95□□□□□ -0.5
SPARC-203ENST00000521327 ZNF764Q96H86 408 aaPredicted RBP11.95□□□□□ -0.5
SPARC-203ENST00000521327 METTL2AQ96IZ6 378 aaKnown RBP11.95□□□□□ -0.5
SPARC-203ENST00000521327 MRGPRX4Q96LA9 322 aa11.95□□□□□ -0.5
SPARC-203ENST00000521327 HOXD1Q9GZZ0 328 aa11.95□□□□□ -0.5
SPARC-203ENST00000521327 ACSS1Q9NUB1 689 aaPredicted RBP11.95□□□□□ -0.5
SPARC-203ENST00000521327 C1orf109Q9NX04 203 aa11.95□□□□□ -0.5
SPARC-203ENST00000521327 BAIAP2L1Q9UHR4 511 aa11.95□□□□□ -0.5
SPARC-203ENST00000521327 MGAT4BQ9UQ53 548 aa11.95□□□□□ -0.5
SPARC-203ENST00000521327 PTGDR2Q9Y5Y4 395 aa11.95□□□□□ -0.5
SPARC-203ENST00000521327 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.95□□□□□ -0.5
SPARC-203ENST00000521327 GOLGA8QA0A0J9YX86 632 aa11.94□□□□□ -0.5
SPARC-203ENST00000521327 A0A1W2PR80 420 aa11.94□□□□□ -0.5
SPARC-203ENST00000521327 GOLGA8OA6NCC3 632 aa11.94□□□□□ -0.5
SPARC-203ENST00000521327 ZNF724A8MTY0 619 aa11.94□□□□□ -0.5
SPARC-203ENST00000521327 GOLGA8NF8WBI6 632 aa11.94□□□□□ -0.5
SPARC-203ENST00000521327 G3V2L1 256 aa11.94□□□□□ -0.5
SPARC-203ENST00000521327 CYTIPO60759 359 aa11.94□□□□□ -0.5
SPARC-203ENST00000521327 TBX19O60806 448 aa11.94□□□□□ -0.5
SPARC-203ENST00000521327 RAD51DO75771 328 aa11.94□□□□□ -0.5
SPARC-203ENST00000521327 IGHV3-9P01782 118 aa11.94□□□□□ -0.5
SPARC-203ENST00000521327 HMGN2P05204 90 aaKnown RBP11.94□□□□□ -0.5
SPARC-203ENST00000521327 DHRS4L1P0CG22 281 aa11.94□□□□□ -0.5
SPARC-203ENST00000521327 SRD5A1P18405 259 aa11.94□□□□□ -0.5
SPARC-203ENST00000521327 COX5AP20674 150 aa11.94□□□□□ -0.5
SPARC-203ENST00000521327 USF1P22415 310 aaPredicted RBP11.94□□□□□ -0.5
SPARC-203ENST00000521327 PTAFRP25105 342 aa11.94□□□□□ -0.5
SPARC-203ENST00000521327 CD40P25942 277 aa11.94□□□□□ -0.5
SPARC-203ENST00000521327 THBS2P35442 1172 aa11.94□□□□□ -0.5
SPARC-203ENST00000521327 FRKP42685 505 aaPredicted RBP11.94□□□□□ -0.5
SPARC-203ENST00000521327 SUMO3P55854 103 aaPredicted RBP11.94□□□□□ -0.5
SPARC-203ENST00000521327 SELENBP1Q13228 472 aa11.94□□□□□ -0.5
SPARC-203ENST00000521327 LASP1Q14847 261 aaKnown RBP11.94□□□□□ -0.5
SPARC-203ENST00000521327 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.94□□□□□ -0.5
SPARC-203ENST00000521327 CLEC6AQ6EIG7 209 aa11.94□□□□□ -0.5
SPARC-203ENST00000521327 CDC73Q6P1J9 531 aa11.94□□□□□ -0.5
SPARC-203ENST00000521327 UBE2J2Q8N2K1 259 aa11.94□□□□□ -0.5
SPARC-203ENST00000521327 C17orf53Q8N3J3 647 aaPredicted RBP11.94□□□□□ -0.5
SPARC-203ENST00000521327 ZNF614Q8N883 585 aa11.94□□□□□ -0.5
SPARC-203ENST00000521327 ZNF527Q8NB42 609 aa11.94□□□□□ -0.5
SPARC-203ENST00000521327 CCDC126Q96EE4 140 aa11.94□□□□□ -0.5
SPARC-203ENST00000521327 FAM120BQ96EK7 910 aaKnown RBP11.94□□□□□ -0.5
SPARC-203ENST00000521327 OR5B2Q96R09 309 aa11.94□□□□□ -0.5
SPARC-203ENST00000521327 STACQ99469 402 aa11.94□□□□□ -0.5
SPARC-203ENST00000521327 CCT7Q99832 543 aa11.94□□□□□ -0.5
SPARC-203ENST00000521327 C1QTNF6Q9BXI9 259 aa11.94□□□□□ -0.5
SPARC-203ENST00000521327 PIGUQ9H490 435 aa11.94□□□□□ -0.5
SPARC-203ENST00000521327 ANKZF1Q9H8Y5 726 aa11.94□□□□□ -0.5
SPARC-203ENST00000521327 DUSP22Q9NRW4 184 aa11.94□□□□□ -0.5
SPARC-203ENST00000521327 ZCCHC3Q9NUD5 404 aaKnown RBP11.94□□□□□ -0.5
SPARC-203ENST00000521327 CIB4A0PJX0 185 aa11.93□□□□□ -0.5
SPARC-203ENST00000521327 CCT8L1PA6NM43 557 aa11.93□□□□□ -0.5
SPARC-203ENST00000521327 H3BQF6 201 aa11.93□□□□□ -0.5
SPARC-203ENST00000521327 H7C417 338 aa11.93□□□□□ -0.5
SPARC-203ENST00000521327 SLC28A1O00337 649 aa11.93□□□□□ -0.5
SPARC-203ENST00000521327 LY6HO94772 140 aa11.93□□□□□ -0.5
SPARC-203ENST00000521327 H6PDO95479 791 aa11.93□□□□□ -0.5
SPARC-203ENST00000521327 UROSP10746 265 aa11.93□□□□□ -0.5
SPARC-203ENST00000521327 MYL2P10916 166 aa11.93□□□□□ -0.5
SPARC-203ENST00000521327 SDC1P18827 310 aa11.93□□□□□ -0.5
SPARC-203ENST00000521327 PRPH2P23942 346 aa11.93□□□□□ -0.5
SPARC-203ENST00000521327 ECHS1P30084 290 aa11.93□□□□□ -0.5
SPARC-203ENST00000521327 CCR4P51679 360 aa11.93□□□□□ -0.5
SPARC-203ENST00000521327 LSM11P83369 360 aaKnown RBP eCLIP11.93□□□□□ -0.5
SPARC-203ENST00000521327 CKAP4Q07065 602 aaKnown RBP11.93□□□□□ -0.5
SPARC-203ENST00000521327 PDE7AQ13946 482 aa11.93□□□□□ -0.5
SPARC-203ENST00000521327 QPRTQ15274 297 aa11.93□□□□□ -0.5
SPARC-203ENST00000521327 TIGD2Q4W5G0 525 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms