RNA–Protein interactions for RNA: ENST00000519540.5

FAM49B-214, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-214ENST00000519540 ASCC3Q8N3C0 2202 aaKnown RBP16.97■□□□□ 0.31
FAM49B-214ENST00000519540 KDM4EB2RXH2 506 aaPredicted RBP16.96■□□□□ 0.31
FAM49B-214ENST00000519540 SLC22A1O15245 554 aa16.96■□□□□ 0.31
FAM49B-214ENST00000519540 PRODHO43272 600 aa16.96■□□□□ 0.31
FAM49B-214ENST00000519540 HMGN1P05114 100 aa16.96■□□□□ 0.31
FAM49B-214ENST00000519540 NGFRP08138 427 aa16.96■□□□□ 0.31
FAM49B-214ENST00000519540 GPR143P51810 404 aa16.96■□□□□ 0.31
FAM49B-214ENST00000519540 DCDP81605 110 aaKnown RBP16.96■□□□□ 0.31
FAM49B-214ENST00000519540 CD226Q15762 336 aa16.96■□□□□ 0.31
FAM49B-214ENST00000519540 RNLSQ5VYX0 342 aa16.96■□□□□ 0.31
FAM49B-214ENST00000519540 APOOLQ6UXV4 268 aa16.96■□□□□ 0.31
FAM49B-214ENST00000519540 HSDL2Q6YN16 418 aa16.96■□□□□ 0.31
FAM49B-214ENST00000519540 PPP1R3BQ86XI6 285 aa16.96■□□□□ 0.31
FAM49B-214ENST00000519540 PRR22Q8IZ63 422 aa16.96■□□□□ 0.31
FAM49B-214ENST00000519540 GATSQ8NAP1 163 aa16.96■□□□□ 0.31
FAM49B-214ENST00000519540 FANK1Q8TC84 345 aa16.96■□□□□ 0.31
FAM49B-214ENST00000519540 ADOQ96SZ5 270 aa16.96■□□□□ 0.31
FAM49B-214ENST00000519540 WWTR1Q9GZV5 400 aa16.96■□□□□ 0.31
FAM49B-214ENST00000519540 ENKD1Q9H0I2 346 aa16.96■□□□□ 0.31
FAM49B-214ENST00000519540 MRPS18AQ9NVS2 196 aaKnown RBP16.96■□□□□ 0.31
FAM49B-214ENST00000519540 OCIAD1Q9NX40 245 aa16.96■□□□□ 0.31
FAM49B-214ENST00000519540 CDC14CA4D256 554 aa16.96■□□□□ 0.3
FAM49B-214ENST00000519540 OR6C76A6NM76 312 aa16.96■□□□□ 0.3
FAM49B-214ENST00000519540 SNTNA6NMZ2 147 aa16.96■□□□□ 0.3
FAM49B-214ENST00000519540 SCDO00767 359 aa16.96■□□□□ 0.3
FAM49B-214ENST00000519540 TO15178 435 aa16.96■□□□□ 0.3
FAM49B-214ENST00000519540 ONECUT2O95948 504 aa16.96■□□□□ 0.3
FAM49B-214ENST00000519540 CDK4P11802 303 aa16.96■□□□□ 0.3
FAM49B-214ENST00000519540 NR0B1P51843 470 aaKnown RBP16.96■□□□□ 0.3
FAM49B-214ENST00000519540 LSM3P62310 102 aaKnown RBP16.96■□□□□ 0.3
FAM49B-214ENST00000519540 ARMCX4Q5H9R4 360 aa16.96■□□□□ 0.3
FAM49B-214ENST00000519540 ZNF385CQ66K41 422 aaPredicted RBP16.96■□□□□ 0.3
FAM49B-214ENST00000519540 SLC29A4Q7RTT9 530 aa16.96■□□□□ 0.3
FAM49B-214ENST00000519540 SLC46A3Q7Z3Q1 461 aa16.96■□□□□ 0.3
FAM49B-214ENST00000519540 PLEKHA8Q96JA3 519 aa16.96■□□□□ 0.3
FAM49B-214ENST00000519540 SMOC1Q9H4F8 434 aa16.96■□□□□ 0.3
FAM49B-214ENST00000519540 APMAPQ9HDC9 416 aa16.96■□□□□ 0.3
FAM49B-214ENST00000519540 SIGLEC7Q9Y286 467 aa16.96■□□□□ 0.3
FAM49B-214ENST00000519540 EFCAB9A8MZ26 197 aa16.95■□□□□ 0.3
FAM49B-214ENST00000519540 NTN3O00634 580 aaPredicted RBP16.95■□□□□ 0.3
FAM49B-214ENST00000519540 PTP4A3O75365 173 aa16.95■□□□□ 0.3
FAM49B-214ENST00000519540 REM1O75628 298 aa16.95■□□□□ 0.3
FAM49B-214ENST00000519540 RCBTB2O95199 551 aa16.95■□□□□ 0.3
FAM49B-214ENST00000519540 HBQ1P09105 142 aa16.95■□□□□ 0.3
FAM49B-214ENST00000519540 SP9P0CG40 484 aa16.95■□□□□ 0.3
FAM49B-214ENST00000519540 SAGP10523 405 aaPredicted RBP16.95■□□□□ 0.3
FAM49B-214ENST00000519540 BMP7P18075 431 aa16.95■□□□□ 0.3
FAM49B-214ENST00000519540 LCN1P31025 176 aa16.95■□□□□ 0.3
FAM49B-214ENST00000519540 GAS1P54826 345 aa16.95■□□□□ 0.3
FAM49B-214ENST00000519540 VBP1P61758 197 aa16.95■□□□□ 0.3
FAM49B-214ENST00000519540 COPZ1P61923 177 aa16.95■□□□□ 0.3
FAM49B-214ENST00000519540 MED22Q15528 200 aa16.95■□□□□ 0.3
FAM49B-214ENST00000519540 ZNF528Q3MIS6 628 aa16.95■□□□□ 0.3
FAM49B-214ENST00000519540 KLHL22Q53GT1 634 aa16.95■□□□□ 0.3
FAM49B-214ENST00000519540 AADACL4Q5VUY2 407 aa16.95■□□□□ 0.3
FAM49B-214ENST00000519540 RPL13AP3Q6NVV1 102 aa16.95■□□□□ 0.3
FAM49B-214ENST00000519540 OVCH1Q7RTY7 1134 aa16.95■□□□□ 0.3
FAM49B-214ENST00000519540 SLC34A3Q8N130 599 aa16.95■□□□□ 0.3
FAM49B-214ENST00000519540 OR52I1Q8NGK6 324 aa16.95■□□□□ 0.3
FAM49B-214ENST00000519540 OR13C2Q8NGS9 318 aa16.95■□□□□ 0.3
FAM49B-214ENST00000519540 PHOSPHO1Q8TCT1 267 aa16.95■□□□□ 0.3
FAM49B-214ENST00000519540 DNAJA4Q8WW22 397 aaPredicted RBP16.95■□□□□ 0.3
FAM49B-214ENST00000519540 RPL3LQ92901 407 aaKnown RBP16.95■□□□□ 0.3
FAM49B-214ENST00000519540 CLEC2DQ9UHP7 191 aa16.95■□□□□ 0.3
FAM49B-214ENST00000519540 DIMT1Q9UNQ2 313 aaKnown RBP16.95■□□□□ 0.3
FAM49B-214ENST00000519540 ERGIC3Q9Y282 383 aa16.95■□□□□ 0.3
FAM49B-214ENST00000519540 MUC3AQ02505 3323 aa16.95■□□□□ 0.3
FAM49B-214ENST00000519540 HEATR5AQ86XA9 2040 aa16.94■□□□□ 0.3
FAM49B-214ENST00000519540 IDSB3KWA1 339 aa16.94■□□□□ 0.3
FAM49B-214ENST00000519540 D6RAR5 112 aa16.94■□□□□ 0.3
FAM49B-214ENST00000519540 BHLHE40O14503 412 aa16.94■□□□□ 0.3
FAM49B-214ENST00000519540 OIP5O43482 229 aa16.94■□□□□ 0.3
FAM49B-214ENST00000519540 HEXBP07686 556 aa16.94■□□□□ 0.3
FAM49B-214ENST00000519540 HSMCR30P0CW71 290 aa16.94■□□□□ 0.3
FAM49B-214ENST00000519540 UBL4AP11441 157 aa16.94■□□□□ 0.3
FAM49B-214ENST00000519540 RGS6P49758 472 aa16.94■□□□□ 0.3
FAM49B-214ENST00000519540 SKP2Q13309 424 aa16.94■□□□□ 0.3
FAM49B-214ENST00000519540 DESI1Q6ICB0 168 aa16.94■□□□□ 0.3
FAM49B-214ENST00000519540 ZNF441Q8N8Z8 693 aa16.94■□□□□ 0.3
FAM49B-214ENST00000519540 OR52L1Q8NGH7 329 aa16.94■□□□□ 0.3
FAM49B-214ENST00000519540 LGALS12Q96DT0 336 aa16.94■□□□□ 0.3
FAM49B-214ENST00000519540 MGLLQ99685 303 aa16.94■□□□□ 0.3
FAM49B-214ENST00000519540 LSM2Q9Y333 95 aaKnown RBP16.94■□□□□ 0.3
FAM49B-214ENST00000519540 SPEGQ15772 3267 aa16.94■□□□□ 0.3
FAM49B-214ENST00000519540 A0A087WUJ7 227 aa16.94■□□□□ 0.3
FAM49B-214ENST00000519540 IGHV3-20A0A0C4DH32 117 aa16.94■□□□□ 0.3
FAM49B-214ENST00000519540 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.94■□□□□ 0.3
FAM49B-214ENST00000519540 FOXD2O60548 495 aaPredicted RBP16.94■□□□□ 0.3
FAM49B-214ENST00000519540 TSPAN2O60636 221 aa16.94■□□□□ 0.3
FAM49B-214ENST00000519540 ICOSLGO75144 302 aa16.94■□□□□ 0.3
FAM49B-214ENST00000519540 SLC2A10O95528 541 aa16.94■□□□□ 0.3
FAM49B-214ENST00000519540 RAB40BQ12829 278 aa16.94■□□□□ 0.3
FAM49B-214ENST00000519540 DOC2BQ14184 412 aa16.94■□□□□ 0.3
FAM49B-214ENST00000519540 SMARCD3Q6STE5 483 aa16.94■□□□□ 0.3
FAM49B-214ENST00000519540 ANKRD37Q7Z713 158 aa16.94■□□□□ 0.3
FAM49B-214ENST00000519540 BPHLQ86WA6 291 aaPredicted RBP16.94■□□□□ 0.3
FAM49B-214ENST00000519540 LNX2Q8N448 690 aa16.94■□□□□ 0.3
FAM49B-214ENST00000519540 AMER2Q8N7J2 671 aa16.94■□□□□ 0.3
FAM49B-214ENST00000519540 NANOGP1Q8N7R0 232 aa16.94■□□□□ 0.3
FAM49B-214ENST00000519540 TBC1D15Q8TC07 691 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms