RNA–Protein interactions for RNA: ENST00000519309.5

CTNNA1-215, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-215ENST00000519309 MRPL57Q9BQC6 102 aaKnown RBP7.36□□□□□ -1.23
CTNNA1-215ENST00000519309 C1QTNF3Q9BXJ4 246 aa7.36□□□□□ -1.23
CTNNA1-215ENST00000519309 FKRPQ9H9S5 495 aa7.36□□□□□ -1.23
CTNNA1-215ENST00000519309 DDX18Q9NVP1 670 aaKnown RBP7.36□□□□□ -1.23
CTNNA1-215ENST00000519309 VPS29Q9UBQ0 182 aa7.36□□□□□ -1.23
CTNNA1-215ENST00000519309 METRNQ9UJH8 293 aa7.36□□□□□ -1.23
CTNNA1-215ENST00000519309 TMCO1Q9UM00 188 aa7.36□□□□□ -1.23
CTNNA1-215ENST00000519309 SNX6Q9UNH7 406 aa7.36□□□□□ -1.23
CTNNA1-215ENST00000519309 ACTL7BQ9Y614 415 aa7.36□□□□□ -1.23
CTNNA1-215ENST00000519309 IGKV3D-15A0A087WSY6 115 aa7.35□□□□□ -1.23
CTNNA1-215ENST00000519309 A0A1W2PPM1 405 aa7.35□□□□□ -1.23
CTNNA1-215ENST00000519309 GXYLT2A0PJZ3 443 aa7.35□□□□□ -1.23
CTNNA1-215ENST00000519309 ETV2O00321 342 aaPredicted RBP7.35□□□□□ -1.23
CTNNA1-215ENST00000519309 EFNA2O43921 213 aa7.35□□□□□ -1.23
CTNNA1-215ENST00000519309 CYTIPO60759 359 aa7.35□□□□□ -1.23
CTNNA1-215ENST00000519309 SMIM24O75264 130 aa7.35□□□□□ -1.23
CTNNA1-215ENST00000519309 RAD51DO75771 328 aa7.35□□□□□ -1.23
CTNNA1-215ENST00000519309 PDE5AO76074 875 aa7.35□□□□□ -1.23
CTNNA1-215ENST00000519309 NKX2-2O95096 273 aa7.35□□□□□ -1.23
CTNNA1-215ENST00000519309 JUNP05412 331 aaKnown RBP7.35□□□□□ -1.23
CTNNA1-215ENST00000519309 DDCP20711 480 aa7.35□□□□□ -1.23
CTNNA1-215ENST00000519309 ENPP1P22413 925 aa7.35□□□□□ -1.23
CTNNA1-215ENST00000519309 IL2RGP31785 369 aa7.35□□□□□ -1.23
CTNNA1-215ENST00000519309 HSD17B3P37058 310 aa7.35□□□□□ -1.23
CTNNA1-215ENST00000519309 RFX3P48380 749 aa7.35□□□□□ -1.23
CTNNA1-215ENST00000519309 NCBP2P52298 156 aaKnown RBP eCLIP7.35□□□□□ -1.231e-7■□□□□ 8.9
CTNNA1-215ENST00000519309 CHN2P52757 468 aa7.35□□□□□ -1.23
CTNNA1-215ENST00000519309 SELENBP1Q13228 472 aa7.35□□□□□ -1.23
CTNNA1-215ENST00000519309 CD226Q15762 336 aa7.35□□□□□ -1.23
CTNNA1-215ENST00000519309 ZNF678Q5SXM1 525 aa7.35□□□□□ -1.23
CTNNA1-215ENST00000519309 TEX35Q5T0J7 233 aa7.35□□□□□ -1.23
CTNNA1-215ENST00000519309 TIFABQ6ZNK6 161 aa7.35□□□□□ -1.23
CTNNA1-215ENST00000519309 USP43Q70EL4 1123 aa7.35□□□□□ -1.23
CTNNA1-215ENST00000519309 TRMT10CQ7L0Y3 403 aaKnown RBP7.35□□□□□ -1.23
CTNNA1-215ENST00000519309 GALNT5Q7Z7M9 940 aa7.35□□□□□ -1.23
CTNNA1-215ENST00000519309 C17orf78Q8N4C9 275 aa7.35□□□□□ -1.23
CTNNA1-215ENST00000519309 CEP112Q8N8E3 955 aa7.35□□□□□ -1.23
CTNNA1-215ENST00000519309 CDYL2Q8N8U2 506 aa7.35□□□□□ -1.23
CTNNA1-215ENST00000519309 OR4C3Q8NH37 302 aa7.35□□□□□ -1.23
CTNNA1-215ENST00000519309 OR52N5Q8NH56 324 aa7.35□□□□□ -1.23
CTNNA1-215ENST00000519309 C16orf78Q8WTQ4 265 aa7.35□□□□□ -1.23
CTNNA1-215ENST00000519309 ELP4Q96EB1 424 aa7.35□□□□□ -1.23
CTNNA1-215ENST00000519309 FOXN4Q96NZ1 517 aa7.35□□□□□ -1.23
CTNNA1-215ENST00000519309 ZNF300Q96RE9 604 aaPredicted RBP7.35□□□□□ -1.23
CTNNA1-215ENST00000519309 BBS4Q96RK4 519 aa7.35□□□□□ -1.23
CTNNA1-215ENST00000519309 KCNA7Q96RP8 456 aa7.35□□□□□ -1.23
CTNNA1-215ENST00000519309 RBM4Q9BWF3 364 aaKnown RBP7.35□□□□□ -1.23
CTNNA1-215ENST00000519309 SAP130Q9H0E3 1048 aa7.35□□□□□ -1.23
CTNNA1-215ENST00000519309 TSPYL1Q9H0U9 437 aa7.35□□□□□ -1.23
CTNNA1-215ENST00000519309 OCEL1Q9H607 264 aa7.35□□□□□ -1.23
CTNNA1-215ENST00000519309 TNFRSF12AQ9NP84 129 aa7.35□□□□□ -1.23
CTNNA1-215ENST00000519309 SIRT5Q9NXA8 310 aa7.35□□□□□ -1.23
CTNNA1-215ENST00000519309 TAS2R16Q9NYV7 291 aa7.35□□□□□ -1.23
CTNNA1-215ENST00000519309 TAS2R7Q9NYW3 318 aa7.35□□□□□ -1.23
CTNNA1-215ENST00000519309 NTMQ9P121 344 aa7.35□□□□□ -1.23
CTNNA1-215ENST00000519309 TBK1Q9UHD2 729 aa7.35□□□□□ -1.23
CTNNA1-215ENST00000519309 GRID1Q9ULK0 1009 aa7.35□□□□□ -1.23
CTNNA1-215ENST00000519309 GPC6Q9Y625 555 aaPredicted RBP7.35□□□□□ -1.23
CTNNA1-215ENST00000519309 GNG14A0A1W2PPG7 69 aa7.34□□□□□ -1.23
CTNNA1-215ENST00000519309 LRP5LA4QPB2 252 aa7.34□□□□□ -1.23
CTNNA1-215ENST00000519309 ATP6V1G2-DDX39BF2Z307 99 aa7.34□□□□□ -1.23
CTNNA1-215ENST00000519309 M0R1B8 84 aa7.34□□□□□ -1.23
CTNNA1-215ENST00000519309 PDLIM1O00151 329 aa7.34□□□□□ -1.23
CTNNA1-215ENST00000519309 MANBAO00462 879 aa7.34□□□□□ -1.23
CTNNA1-215ENST00000519309 TMPRSS2O15393 492 aa7.34□□□□□ -1.23
CTNNA1-215ENST00000519309 LILRA1O75019 489 aa7.34□□□□□ -1.23
CTNNA1-215ENST00000519309 APEX1P27695 318 aaKnown RBP7.34□□□□□ -1.23
CTNNA1-215ENST00000519309 NTSP30990 170 aa7.34□□□□□ -1.23
CTNNA1-215ENST00000519309 LIMS1P48059 325 aa7.34□□□□□ -1.23
CTNNA1-215ENST00000519309 PPOXP50336 477 aa7.34□□□□□ -1.23
CTNNA1-215ENST00000519309 FOXA1P55317 472 aa7.34□□□□□ -1.23
CTNNA1-215ENST00000519309 SNRPD2P62316 118 aaKnown RBP7.34□□□□□ -1.23
CTNNA1-215ENST00000519309 DEFA6Q01524 100 aa7.34□□□□□ -1.23
CTNNA1-215ENST00000519309 ZNF117Q03924 483 aa7.34□□□□□ -1.23
CTNNA1-215ENST00000519309 CLCQ05315 142 aa7.34□□□□□ -1.23
CTNNA1-215ENST00000519309 LGALS3BPQ08380 585 aa7.34□□□□□ -1.23
CTNNA1-215ENST00000519309 ACSM2AQ08AH3 577 aa7.34□□□□□ -1.23
CTNNA1-215ENST00000519309 ZNF763Q0D2J5 394 aa7.34□□□□□ -1.23
CTNNA1-215ENST00000519309 RASGEF1BQ0VAM2 473 aa7.34□□□□□ -1.23
CTNNA1-215ENST00000519309 PDK3Q15120 406 aa7.34□□□□□ -1.23
CTNNA1-215ENST00000519309 PDCD2Q16342 344 aaPredicted RBP7.34□□□□□ -1.23
CTNNA1-215ENST00000519309 PRSS53Q2L4Q9 553 aa7.34□□□□□ -1.23
CTNNA1-215ENST00000519309 VPS26BQ4G0F5 336 aa7.34□□□□□ -1.23
CTNNA1-215ENST00000519309 IQCCQ4KMZ1 466 aa7.34□□□□□ -1.23
CTNNA1-215ENST00000519309 SLC25A53Q5H9E4 307 aa7.34□□□□□ -1.23
CTNNA1-215ENST00000519309 FBXW9Q5XUX1 488 aa7.34□□□□□ -1.23
CTNNA1-215ENST00000519309 ACSM2BQ68CK6 577 aa7.34□□□□□ -1.23
CTNNA1-215ENST00000519309 UGT2A3Q6UWM9 527 aa7.34□□□□□ -1.23
CTNNA1-215ENST00000519309 RINLQ6ZS11 566 aa7.34□□□□□ -1.23
CTNNA1-215ENST00000519309 IFT20Q8IY31 132 aa7.34□□□□□ -1.23
CTNNA1-215ENST00000519309 LRRC17Q8N6Y2 441 aa7.34□□□□□ -1.23
CTNNA1-215ENST00000519309 GATSQ8NAP1 163 aa7.34□□□□□ -1.23
CTNNA1-215ENST00000519309 C1orf162Q8NEQ5 155 aaPredicted RBP7.34□□□□□ -1.23
CTNNA1-215ENST00000519309 OR6Y1Q8NGX8 325 aa7.34□□□□□ -1.23
CTNNA1-215ENST00000519309 B4GALNT2Q8NHY0 566 aa7.34□□□□□ -1.23
CTNNA1-215ENST00000519309 PIK3R3Q92569 461 aa7.34□□□□□ -1.23
CTNNA1-215ENST00000519309 GCDHQ92947 438 aaPredicted RBP7.34□□□□□ -1.23
CTNNA1-215ENST00000519309 SH3YL1Q96HL8 342 aaPredicted RBP7.34□□□□□ -1.23
CTNNA1-215ENST00000519309 AMDHD1Q96NU7 426 aa7.34□□□□□ -1.23
CTNNA1-215ENST00000519309 MUS81Q96NY9 551 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms