RNA–Protein interactions for RNA: ENST00000519100.5

PABPC1-209, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-209ENST00000519100 SPP2Q13103 211 aa2.19□□□□□ -2.06
PABPC1-209ENST00000519100 IL18R1Q13478 541 aa2.19□□□□□ -2.06
PABPC1-209ENST00000519100 SMC1AQ14683 1233 aaKnown RBP2.19□□□□□ -2.06
PABPC1-209ENST00000519100 ANGPT1Q15389 498 aa2.19□□□□□ -2.06
PABPC1-209ENST00000519100 CEBPEQ15744 281 aa2.19□□□□□ -2.06
PABPC1-209ENST00000519100 GSG1Q2KHT4 349 aa2.19□□□□□ -2.06
PABPC1-209ENST00000519100 IL23RQ5VWK5 629 aa2.19□□□□□ -2.06
PABPC1-209ENST00000519100 WASH2PQ6VEQ5 465 aa2.19□□□□□ -2.06
PABPC1-209ENST00000519100 HACD2Q6Y1H2 254 aa2.19□□□□□ -2.06
PABPC1-209ENST00000519100 GCNT7Q6ZNI0 430 aa2.19□□□□□ -2.06
PABPC1-209ENST00000519100 CYS1Q717R9 158 aa2.19□□□□□ -2.06
PABPC1-209ENST00000519100 RANBP3LQ86VV4 465 aaPredicted RBP2.19□□□□□ -2.06
PABPC1-209ENST00000519100 ZSCAN30Q86W11 494 aa2.19□□□□□ -2.06
PABPC1-209ENST00000519100 CCDC36Q8IYA8 594 aa2.19□□□□□ -2.06
PABPC1-209ENST00000519100 SLC34A3Q8N130 599 aa2.19□□□□□ -2.06
PABPC1-209ENST00000519100 COLGALT1Q8NBJ5 622 aa2.19□□□□□ -2.06
PABPC1-209ENST00000519100 OR8H1Q8NGG4 311 aa2.19□□□□□ -2.06
PABPC1-209ENST00000519100 RSPH1Q8WYR4 309 aa2.19□□□□□ -2.06
PABPC1-209ENST00000519100 CCDC47Q96A33 483 aaKnown RBP2.19□□□□□ -2.06
PABPC1-209ENST00000519100 MRPL38Q96DV4 380 aaKnown RBP2.19□□□□□ -2.06
PABPC1-209ENST00000519100 C19orf43Q9BQ61 176 aa2.19□□□□□ -2.06
PABPC1-209ENST00000519100 SPXQ9BT56 116 aa2.19□□□□□ -2.06
PABPC1-209ENST00000519100 YTHDF1Q9BYJ9 559 aaKnown RBP2.19□□□□□ -2.06
PABPC1-209ENST00000519100 TMEM231Q9H6L2 316 aa2.19□□□□□ -2.06
PABPC1-209ENST00000519100 YAE1D1Q9NRH1 226 aa2.19□□□□□ -2.06
PABPC1-209ENST00000519100 IMPAD1Q9NX62 359 aa2.19□□□□□ -2.06
PABPC1-209ENST00000519100 CIDEBQ9UHD4 219 aa2.19□□□□□ -2.06
PABPC1-209ENST00000519100 ZNF256Q9Y2P7 627 aaPredicted RBP2.19□□□□□ -2.06
PABPC1-209ENST00000519100 MGAMO43451 1857 aa2.19□□□□□ -2.06
PABPC1-209ENST00000519100 TGP01266 2768 aa2.19□□□□□ -2.06
PABPC1-209ENST00000519100 COL4A1P02462 1669 aa2.18□□□□□ -2.06
PABPC1-209ENST00000519100 NIPBLQ6KC79 2804 aaeCLIP2.18□□□□□ -2.061e-8■□□□□ 9.7
PABPC1-209ENST00000519100 UBE4BO95155 1302 aa2.18□□□□□ -2.06
PABPC1-209ENST00000519100 NPIPA2E9PIF3 369 aa2.18□□□□□ -2.06
PABPC1-209ENST00000519100 CASKO14936 926 aa2.18□□□□□ -2.06
PABPC1-209ENST00000519100 GPAA1O43292 621 aa2.18□□□□□ -2.06
PABPC1-209ENST00000519100 GJB5O95377 273 aa2.18□□□□□ -2.06
PABPC1-209ENST00000519100 SNRPCP09234 159 aaKnown RBP2.18□□□□□ -2.06
PABPC1-209ENST00000519100 HMGB2P26583 209 aaKnown RBP2.18□□□□□ -2.06
PABPC1-209ENST00000519100 HTR5AP47898 357 aa2.18□□□□□ -2.06
PABPC1-209ENST00000519100 IL1RL1Q01638 556 aa2.18□□□□□ -2.06
PABPC1-209ENST00000519100 ASAH1Q13510 395 aa2.18□□□□□ -2.06
PABPC1-209ENST00000519100 EIF2B1Q14232 305 aaKnown RBP2.18□□□□□ -2.06
PABPC1-209ENST00000519100 GAMTQ14353 236 aa2.18□□□□□ -2.06
PABPC1-209ENST00000519100 PDIA5Q14554 519 aa2.18□□□□□ -2.06
PABPC1-209ENST00000519100 RAB35Q15286 201 aa2.18□□□□□ -2.06
PABPC1-209ENST00000519100 UBE2V2Q15819 145 aa2.18□□□□□ -2.06
PABPC1-209ENST00000519100 FHL5Q5TD97 284 aa2.18□□□□□ -2.06
PABPC1-209ENST00000519100 ZNF57Q68EA5 555 aaPredicted RBP2.18□□□□□ -2.06
PABPC1-209ENST00000519100 BTNL3Q6UXE8 466 aa2.18□□□□□ -2.06
PABPC1-209ENST00000519100 KRTAP5-5Q701N2 237 aaPredicted RBP2.18□□□□□ -2.06
PABPC1-209ENST00000519100 ERASQ7Z444 233 aa2.18□□□□□ -2.06
PABPC1-209ENST00000519100 P4HA3Q7Z4N8 544 aa2.18□□□□□ -2.06
PABPC1-209ENST00000519100 ZNF619Q8N2I2 560 aa2.18□□□□□ -2.06
PABPC1-209ENST00000519100 CCDC26Q8TAB7 109 aa2.18□□□□□ -2.06
PABPC1-209ENST00000519100 FNDC8Q8TC99 324 aa2.18□□□□□ -2.06
PABPC1-209ENST00000519100 VN1R17PQ8TDU5 208 aa2.18□□□□□ -2.06
PABPC1-209ENST00000519100 MCHR2Q969V1 340 aa2.18□□□□□ -2.06
PABPC1-209ENST00000519100 C11orf24Q96F05 449 aaPredicted RBP2.18□□□□□ -2.06
PABPC1-209ENST00000519100 VSIG2Q96IQ7 327 aa2.18□□□□□ -2.06
PABPC1-209ENST00000519100 SERAC1Q96JX3 654 aa2.18□□□□□ -2.06
PABPC1-209ENST00000519100 SAMD8Q96LT4 415 aa2.18□□□□□ -2.06
PABPC1-209ENST00000519100 C9orf85Q96MD7 179 aa2.18□□□□□ -2.06
PABPC1-209ENST00000519100 FAM111AQ96PZ2 611 aa2.18□□□□□ -2.06
PABPC1-209ENST00000519100 TSPAN18Q96SJ8 248 aa2.18□□□□□ -2.06
PABPC1-209ENST00000519100 CARD6Q9BX69 1037 aa2.18□□□□□ -2.06
PABPC1-209ENST00000519100 DEFB126Q9BYW3 111 aa2.18□□□□□ -2.06
PABPC1-209ENST00000519100 UPF3BQ9BZI7 483 aaKnown RBP2.18□□□□□ -2.06
PABPC1-209ENST00000519100 IKZF5Q9H5V7 419 aa2.18□□□□□ -2.06
PABPC1-209ENST00000519100 DCAF13Q9NV06 445 aaKnown RBP2.18□□□□□ -2.06
PABPC1-209ENST00000519100 ANAPC11Q9NYG5 84 aa2.18□□□□□ -2.06
PABPC1-209ENST00000519100 P2RX2Q9UBL9 471 aa2.18□□□□□ -2.06
PABPC1-209ENST00000519100 BCAP29Q9UHQ4 241 aa2.18□□□□□ -2.06
PABPC1-209ENST00000519100 BARX2Q9UMQ3 279 aaPredicted RBP2.18□□□□□ -2.06
PABPC1-209ENST00000519100 DUSP12Q9UNI6 340 aa2.18□□□□□ -2.06
PABPC1-209ENST00000519100 PLEKHA6Q9Y2H5 1048 aa2.18□□□□□ -2.06
PABPC1-209ENST00000519100 NTNG1Q9Y2I2 539 aa2.18□□□□□ -2.06
PABPC1-209ENST00000519100 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.18□□□□□ -2.06
PABPC1-209ENST00000519100 RLFQ13129 1914 aa2.18□□□□□ -2.06
PABPC1-209ENST00000519100 ATMQ13315 3056 aa2.18□□□□□ -2.06
PABPC1-209ENST00000519100 LOC285556D6RIA3 1793 aa2.18□□□□□ -2.06
PABPC1-209ENST00000519100 DOCK3Q8IZD9 2030 aa2.17□□□□□ -2.06
PABPC1-209ENST00000519100 CSMD2Q7Z408 3487 aa2.17□□□□□ -2.06
PABPC1-209ENST00000519100 CUBNO60494 3623 aa2.17□□□□□ -2.06
PABPC1-209ENST00000519100 IGHV3-35A0A0C4DH35 117 aa2.17□□□□□ -2.06
PABPC1-209ENST00000519100 KLF18A0A0U1RQI7 1052 aa2.17□□□□□ -2.06
PABPC1-209ENST00000519100 TTC26A0AVF1 554 aa2.17□□□□□ -2.06
PABPC1-209ENST00000519100 BUB1O43683 1085 aa2.17□□□□□ -2.06
PABPC1-209ENST00000519100 DUSP14O95147 198 aaKnown RBP2.17□□□□□ -2.06
PABPC1-209ENST00000519100 APBB3O95704 486 aa2.17□□□□□ -2.06
PABPC1-209ENST00000519100 SLC35G4P0C7Q5 338 aa2.17□□□□□ -2.06
PABPC1-209ENST00000519100 CCNA2P20248 432 aa2.17□□□□□ -2.06
PABPC1-209ENST00000519100 PTBP1P26599 531 aaKnown RBP eCLIP2.17□□□□□ -2.06
PABPC1-209ENST00000519100 PTPN6P29350 595 aa2.17□□□□□ -2.06
PABPC1-209ENST00000519100 CDH5P33151 784 aaPredicted RBP2.17□□□□□ -2.06
PABPC1-209ENST00000519100 ACVR1BP36896 505 aa2.17□□□□□ -2.06
PABPC1-209ENST00000519100 MAGEA4P43358 317 aa2.17□□□□□ -2.06
PABPC1-209ENST00000519100 ALDH3B2P48448 385 aa2.17□□□□□ -2.06
PABPC1-209ENST00000519100 FNTAP49354 379 aa2.17□□□□□ -2.06
PABPC1-209ENST00000519100 NUMBP49757 651 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms