RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 SUSD4Q5VX71 490 aa5.27□□□□□ -1.57
SQLE-203ENST00000518931 GGNBP1Q5YKI7 109 aa5.27□□□□□ -1.57
SQLE-203ENST00000518931 NSUN5P2Q63ZY6 315 aa5.27□□□□□ -1.57
SQLE-203ENST00000518931 OR52W1Q6IF63 320 aa5.27□□□□□ -1.57
SQLE-203ENST00000518931 RGMBQ6NW40 437 aa5.27□□□□□ -1.57
SQLE-203ENST00000518931 GCNT7Q6ZNI0 430 aa5.27□□□□□ -1.57
SQLE-203ENST00000518931 GOLGA7Q7Z5G4 137 aa5.27□□□□□ -1.57
SQLE-203ENST00000518931 TMPRSS12Q86WS5 348 aa5.27□□□□□ -1.57
SQLE-203ENST00000518931 PTOV1Q86YD1 416 aa5.27□□□□□ -1.57
SQLE-203ENST00000518931 MCOLN2Q8IZK6 566 aa5.27□□□□□ -1.57
SQLE-203ENST00000518931 SMRP1Q8NCR6 262 aa5.27□□□□□ -1.57
SQLE-203ENST00000518931 OR6Q1Q8NGQ2 317 aa5.27□□□□□ -1.57
SQLE-203ENST00000518931 TMEM239Q8WW34 195 aa5.27□□□□□ -1.57
SQLE-203ENST00000518931 SSMEM1Q8WWF3 244 aa5.27□□□□□ -1.57
SQLE-203ENST00000518931 FCAMRQ8WWV6 532 aa5.27□□□□□ -1.57
SQLE-203ENST00000518931 WBP2Q969T9 261 aa5.27□□□□□ -1.57
SQLE-203ENST00000518931 C8orf44Q96CB5 159 aa5.27□□□□□ -1.57
SQLE-203ENST00000518931 SCRN2Q96FV2 425 aa5.27□□□□□ -1.57
SQLE-203ENST00000518931 SMIM10Q96HG1 83 aa5.27□□□□□ -1.57
SQLE-203ENST00000518931 METTL2AQ96IZ6 378 aaKnown RBP5.27□□□□□ -1.57
SQLE-203ENST00000518931 FAM84BQ96KN1 310 aaPredicted RBP5.27□□□□□ -1.57
SQLE-203ENST00000518931 NSMCE3Q96MG7 304 aa5.27□□□□□ -1.57
SQLE-203ENST00000518931 NOTCH4Q99466 2003 aa5.27□□□□□ -1.57
SQLE-203ENST00000518931 SLC2A11Q9BYW1 496 aa5.27□□□□□ -1.57
SQLE-203ENST00000518931 TPK1Q9H3S4 243 aa5.27□□□□□ -1.57
SQLE-203ENST00000518931 NXF3Q9H4D5 531 aaKnown RBP5.27□□□□□ -1.57
SQLE-203ENST00000518931 CHST11Q9NPF2 352 aa5.27□□□□□ -1.57
SQLE-203ENST00000518931 POLE4Q9NR33 117 aa5.27□□□□□ -1.57
SQLE-203ENST00000518931 ACSS1Q9NUB1 689 aaPredicted RBP5.27□□□□□ -1.57
SQLE-203ENST00000518931 ATP10DQ9P241 1426 aa5.27□□□□□ -1.57
SQLE-203ENST00000518931 DAPK2Q9UIK4 370 aa5.27□□□□□ -1.57
SQLE-203ENST00000518931 TINAGQ9UJW2 476 aa5.27□□□□□ -1.57
SQLE-203ENST00000518931 AP3M1Q9Y2T2 418 aa5.27□□□□□ -1.57
SQLE-203ENST00000518931 KIF24Q5T7B8 1368 aa5.27□□□□□ -1.57
SQLE-203ENST00000518931 TCF20Q9UGU0 1960 aaKnown RBP5.26□□□□□ -1.57
SQLE-203ENST00000518931 A0A1B0GTI1 187 aa5.26□□□□□ -1.57
SQLE-203ENST00000518931 KBTBD11-OT1A0A1B0GTJ5 212 aa5.26□□□□□ -1.57
SQLE-203ENST00000518931 NPIPA7E9PJI5 369 aa5.26□□□□□ -1.57
SQLE-203ENST00000518931 MKRN2OSH3BPM6 223 aa5.26□□□□□ -1.57
SQLE-203ENST00000518931 J3QR06 171 aa5.26□□□□□ -1.57
SQLE-203ENST00000518931 DLGAP1O14490 977 aa5.26□□□□□ -1.57
SQLE-203ENST00000518931 CLOCKO15516 846 aa5.26□□□□□ -1.57
SQLE-203ENST00000518931 OR2J3O76001 311 aa5.26□□□□□ -1.57
SQLE-203ENST00000518931 ETHE1O95571 254 aa5.26□□□□□ -1.57
SQLE-203ENST00000518931 NPIPA8P0DM63 369 aa5.26□□□□□ -1.57
SQLE-203ENST00000518931 CT45A8P0DMV1 189 aa5.26□□□□□ -1.57
SQLE-203ENST00000518931 CT45A9P0DMV2 189 aa5.26□□□□□ -1.57
SQLE-203ENST00000518931 PSKH1P11801 424 aa5.26□□□□□ -1.57
SQLE-203ENST00000518931 ATP1B2P14415 290 aaPredicted RBP5.26□□□□□ -1.57
SQLE-203ENST00000518931 UQCRBP14927 111 aa5.26□□□□□ -1.57
SQLE-203ENST00000518931 ZNF26P17031 533 aaPredicted RBP5.26□□□□□ -1.57
SQLE-203ENST00000518931 MSH3P20585 1137 aa5.26□□□□□ -1.57
SQLE-203ENST00000518931 MAGP20916 626 aa5.26□□□□□ -1.57
SQLE-203ENST00000518931 MAOAP21397 527 aa5.26□□□□□ -1.57
SQLE-203ENST00000518931 HSD11B1P28845 292 aa5.26□□□□□ -1.57
SQLE-203ENST00000518931 CYLC1P35663 651 aaPredicted RBP5.26□□□□□ -1.57
SQLE-203ENST00000518931 RFX3P48380 749 aa5.26□□□□□ -1.57
SQLE-203ENST00000518931 PLK1P53350 603 aa5.26□□□□□ -1.57
SQLE-203ENST00000518931 UCNP55089 124 aa5.26□□□□□ -1.57
SQLE-203ENST00000518931 ATP5J2P56134 94 aa5.26□□□□□ -1.57
SQLE-203ENST00000518931 CLDN15P56746 228 aa5.26□□□□□ -1.57
SQLE-203ENST00000518931 OR2B6P58173 313 aa5.26□□□□□ -1.57
SQLE-203ENST00000518931 ACTBP60709 375 aa5.26□□□□□ -1.57
SQLE-203ENST00000518931 ACTA2P62736 377 aa5.26□□□□□ -1.57
SQLE-203ENST00000518931 HERVK_113P63132 956 aa5.26□□□□□ -1.57
SQLE-203ENST00000518931 ERVK-8P63133 956 aa5.26□□□□□ -1.57
SQLE-203ENST00000518931 ACTG1P63261 375 aa5.26□□□□□ -1.57
SQLE-203ENST00000518931 ACTG2P63267 376 aa5.26□□□□□ -1.57
SQLE-203ENST00000518931 ACTC1P68032 377 aa5.26□□□□□ -1.57
SQLE-203ENST00000518931 ACTA1P68133 377 aa5.26□□□□□ -1.57
SQLE-203ENST00000518931 MAD2L1Q13257 205 aaPredicted RBP5.26□□□□□ -1.57
SQLE-203ENST00000518931 ZNF699Q32M78 642 aa5.26□□□□□ -1.57
SQLE-203ENST00000518931 NDUFAF6Q330K2 333 aa5.26□□□□□ -1.57
SQLE-203ENST00000518931 SFT2D3Q587I9 215 aa5.26□□□□□ -1.57
SQLE-203ENST00000518931 CT45A2Q5DJT8 189 aa5.26□□□□□ -1.57
SQLE-203ENST00000518931 ARMCX4Q5H9R4 360 aa5.26□□□□□ -1.57
SQLE-203ENST00000518931 MARCH8Q5T0T0 291 aa5.26□□□□□ -1.57
SQLE-203ENST00000518931 OTUD3Q5T2D3 398 aaPredicted RBP5.26□□□□□ -1.57
SQLE-203ENST00000518931 C9orf57Q5W0N0 161 aa5.26□□□□□ -1.57
SQLE-203ENST00000518931 ASCL4Q6XD76 172 aa5.26□□□□□ -1.57
SQLE-203ENST00000518931 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.26□□□□□ -1.576e-13■■■■□ 26.3
SQLE-203ENST00000518931 BHLHA9Q7RTU4 235 aa5.26□□□□□ -1.57
SQLE-203ENST00000518931 TMPRSS11BQ86T26 416 aa5.26□□□□□ -1.57
SQLE-203ENST00000518931 ZNF546Q86UE3 836 aa5.26□□□□□ -1.57
SQLE-203ENST00000518931 SLC51BQ86UW2 128 aa5.26□□□□□ -1.57
SQLE-203ENST00000518931 PARGQ86W56 976 aa5.26□□□□□ -1.57
SQLE-203ENST00000518931 CATSPERDQ86XM0 798 aa5.26□□□□□ -1.57
SQLE-203ENST00000518931 ZNF677Q86XU0 584 aa5.26□□□□□ -1.57
SQLE-203ENST00000518931 CRLF3Q8IUI8 442 aa5.26□□□□□ -1.57
SQLE-203ENST00000518931 SLC38A6Q8IZM9 456 aa5.26□□□□□ -1.57
SQLE-203ENST00000518931 KIRREL3Q8IZU9 778 aa5.26□□□□□ -1.57
SQLE-203ENST00000518931 TTC29Q8NA56 475 aaPredicted RBP5.26□□□□□ -1.57
SQLE-203ENST00000518931 OR4D5Q8NGN0 318 aa5.26□□□□□ -1.57
SQLE-203ENST00000518931 SMPDL3BQ92485 455 aa5.26□□□□□ -1.57
SQLE-203ENST00000518931 CPNE4Q96A23 557 aaPredicted RBP5.26□□□□□ -1.57
SQLE-203ENST00000518931 LGALS12Q96DT0 336 aa5.26□□□□□ -1.57
SQLE-203ENST00000518931 PPP1R36Q96LQ0 422 aa5.26□□□□□ -1.57
SQLE-203ENST00000518931 CCDC42Q96M95 316 aa5.26□□□□□ -1.57
SQLE-203ENST00000518931 JSRP1Q96MG2 331 aaPredicted RBP5.26□□□□□ -1.57
SQLE-203ENST00000518931 OPALINQ96PE5 141 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms