RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 DEFB134Q4QY38 66 aa16.98■□□□□ 0.31
SDC2-202ENST00000518385 Q5BKY6 102 aa16.98■□□□□ 0.31
SDC2-202ENST00000518385 PEAR1Q5VY43 1037 aaPredicted RBP16.98■□□□□ 0.31
SDC2-202ENST00000518385 OGFOD3Q6PK18 319 aa16.98■□□□□ 0.31
SDC2-202ENST00000518385 C17orf82Q86X59 251 aaPredicted RBP16.98■□□□□ 0.31
SDC2-202ENST00000518385 OR4N4Q8N0Y3 316 aa16.98■□□□□ 0.31
SDC2-202ENST00000518385 CSNK1A1LQ8N752 337 aa16.98■□□□□ 0.31
SDC2-202ENST00000518385 ARIH2OSQ8N7S6 290 aa16.98■□□□□ 0.31
SDC2-202ENST00000518385 OSTF1Q92882 214 aa16.98■□□□□ 0.31
SDC2-202ENST00000518385 CCDC3Q9BQI4 270 aa16.98■□□□□ 0.31
SDC2-202ENST00000518385 ACTRT3Q9BYD9 372 aa16.98■□□□□ 0.31
SDC2-202ENST00000518385 COPZ2Q9P299 210 aa16.98■□□□□ 0.31
SDC2-202ENST00000518385 PTGFRNQ9P2B2 879 aa16.98■□□□□ 0.31
SDC2-202ENST00000518385 BOLA1Q9Y3E2 137 aa16.98■□□□□ 0.31
SDC2-202ENST00000518385 CDH10Q9Y6N8 788 aa16.98■□□□□ 0.31
SDC2-202ENST00000518385 SDK1Q7Z5N4 2213 aa16.98■□□□□ 0.31
SDC2-202ENST00000518385 LINC00862A6NCI5 91 aa16.98■□□□□ 0.31
SDC2-202ENST00000518385 WASHC1A8K0Z3 465 aa16.98■□□□□ 0.31
SDC2-202ENST00000518385 CPNE3O75131 537 aaKnown RBP16.98■□□□□ 0.31
SDC2-202ENST00000518385 RFPL3O75679 317 aa16.98■□□□□ 0.31
SDC2-202ENST00000518385 IGHA1P01876 353 aa16.98■□□□□ 0.31
SDC2-202ENST00000518385 HMGN1P05114 100 aa16.98■□□□□ 0.31
SDC2-202ENST00000518385 CLEC2LP0C7M8 214 aa16.98■□□□□ 0.31
SDC2-202ENST00000518385 PEPDP12955 493 aa16.98■□□□□ 0.31
SDC2-202ENST00000518385 RNF144AP50876 292 aaPredicted RBP16.98■□□□□ 0.31
SDC2-202ENST00000518385 RAG2P55895 527 aa16.98■□□□□ 0.31
SDC2-202ENST00000518385 IL18Q14116 193 aa16.98■□□□□ 0.31
SDC2-202ENST00000518385 TMEM107Q6UX40 140 aa16.98■□□□□ 0.31
SDC2-202ENST00000518385 SZRD1Q7Z422 152 aa16.98■□□□□ 0.31
SDC2-202ENST00000518385 ZER1Q7Z7L7 766 aa16.98■□□□□ 0.31
SDC2-202ENST00000518385 LRRC28Q86X40 367 aaPredicted RBP16.98■□□□□ 0.31
SDC2-202ENST00000518385 ARL14Q8N4G2 192 aa16.98■□□□□ 0.31
SDC2-202ENST00000518385 ZBTB44Q8NCP5 570 aa16.98■□□□□ 0.31
SDC2-202ENST00000518385 ANKK1Q8NFD2 765 aa16.98■□□□□ 0.31
SDC2-202ENST00000518385 ZCCHC10Q8TBK6 192 aa16.98■□□□□ 0.31
SDC2-202ENST00000518385 SNAPC3Q92966 411 aa16.98■□□□□ 0.31
SDC2-202ENST00000518385 C7orf50Q9BRJ6 194 aaKnown RBP16.98■□□□□ 0.31
SDC2-202ENST00000518385 ATP13A2Q9NQ11 1180 aa16.98■□□□□ 0.31
SDC2-202ENST00000518385 EMC3Q9P0I2 261 aa16.98■□□□□ 0.31
SDC2-202ENST00000518385 CLCA2Q9UQC9 943 aa16.98■□□□□ 0.31
SDC2-202ENST00000518385 CSNK1G3Q9Y6M4 447 aa16.98■□□□□ 0.31
SDC2-202ENST00000518385 BLACEA4D250 179 aa16.97■□□□□ 0.31
SDC2-202ENST00000518385 B8ZZF3 427 aa16.97■□□□□ 0.31
SDC2-202ENST00000518385 GALR3O60755 368 aaPredicted RBP16.97■□□□□ 0.31
SDC2-202ENST00000518385 SOX30O94993 753 aa16.97■□□□□ 0.31
SDC2-202ENST00000518385 RBMS1P29558 406 aaKnown RBP16.97■□□□□ 0.31
SDC2-202ENST00000518385 TALDO1P37837 337 aa16.97■□□□□ 0.31
SDC2-202ENST00000518385 SLC1A3P43003 542 aa16.97■□□□□ 0.31
SDC2-202ENST00000518385 PRKAG1P54619 331 aa16.97■□□□□ 0.31
SDC2-202ENST00000518385 FABP5Q01469 135 aa16.97■□□□□ 0.31
SDC2-202ENST00000518385 LASP1Q14847 261 aaKnown RBP16.97■□□□□ 0.31
SDC2-202ENST00000518385 TRAM2Q15035 370 aa16.97■□□□□ 0.31
SDC2-202ENST00000518385 SYPL1Q16563 259 aa16.97■□□□□ 0.31
SDC2-202ENST00000518385 BTBD16Q32M84 506 aa16.97■□□□□ 0.31
SDC2-202ENST00000518385 RPS26P11Q5JNZ5 115 aaPredicted RBP16.97■□□□□ 0.31
SDC2-202ENST00000518385 IDO2Q6ZQW0 420 aa16.97■□□□□ 0.31
SDC2-202ENST00000518385 CADM2Q8N3J6 435 aa16.97■□□□□ 0.31
SDC2-202ENST00000518385 NLGN4YQ8NFZ3 816 aaPredicted RBP16.97■□□□□ 0.31
SDC2-202ENST00000518385 PIGKQ92643 395 aa16.97■□□□□ 0.31
SDC2-202ENST00000518385 RADILQ96JH8 1075 aa16.97■□□□□ 0.31
SDC2-202ENST00000518385 ELF4Q99607 663 aaPredicted RBP16.97■□□□□ 0.31
SDC2-202ENST00000518385 CHRNA10Q9GZZ6 450 aa16.97■□□□□ 0.31
SDC2-202ENST00000518385 KRCC1Q9NPI7 259 aaPredicted RBP16.97■□□□□ 0.31
SDC2-202ENST00000518385 UCKL1Q9NWZ5 548 aa16.97■□□□□ 0.31
SDC2-202ENST00000518385 COMMD3Q9UBI1 195 aa16.97■□□□□ 0.31
SDC2-202ENST00000518385 NUP50Q9UKX7 468 aa16.97■□□□□ 0.31
SDC2-202ENST00000518385 AUP1Q9Y679 476 aa16.97■□□□□ 0.31
SDC2-202ENST00000518385 LINC00854A0A1B0GVQ3 168 aa16.96■□□□□ 0.31
SDC2-202ENST00000518385 PRAMEF27A3QJZ7 478 aa16.96■□□□□ 0.31
SDC2-202ENST00000518385 FAM227AF5H4B4 570 aa16.96■□□□□ 0.31
SDC2-202ENST00000518385 SDC3O75056 442 aa16.96■□□□□ 0.31
SDC2-202ENST00000518385 LIMS3P0CW19 117 aa16.96■□□□□ 0.31
SDC2-202ENST00000518385 LIMS4P0CW20 117 aa16.96■□□□□ 0.31
SDC2-202ENST00000518385 C8orf89P0DMQ9 161 aa16.96■□□□□ 0.31
SDC2-202ENST00000518385 CPMP14384 443 aa16.96■□□□□ 0.31
SDC2-202ENST00000518385 PVRP15151 417 aa16.96■□□□□ 0.31
SDC2-202ENST00000518385 APEX1P27695 318 aaKnown RBP16.96■□□□□ 0.31
SDC2-202ENST00000518385 RFX3P48380 749 aa16.96■□□□□ 0.31
SDC2-202ENST00000518385 GPLD1P80108 840 aa16.96■□□□□ 0.31
SDC2-202ENST00000518385 DUSP2Q05923 314 aa16.96■□□□□ 0.31
SDC2-202ENST00000518385 ACSM5Q6NUN0 579 aa16.96■□□□□ 0.31
SDC2-202ENST00000518385 ZCCHC12Q6PEW1 402 aa16.96■□□□□ 0.31
SDC2-202ENST00000518385 PAQR6Q6TCH4 344 aa16.96■□□□□ 0.31
SDC2-202ENST00000518385 BAIAP2L2Q6UXY1 529 aa16.96■□□□□ 0.31
SDC2-202ENST00000518385 TPRA1Q86W33 373 aa16.96■□□□□ 0.31
SDC2-202ENST00000518385 LRRC17Q8N6Y2 441 aa16.96■□□□□ 0.31
SDC2-202ENST00000518385 C19orf47Q8N9M1 422 aaKnown RBP16.96■□□□□ 0.31
SDC2-202ENST00000518385 OR9A2Q8NGT5 310 aa16.96■□□□□ 0.31
SDC2-202ENST00000518385 NEIL3Q8TAT5 605 aa16.96■□□□□ 0.31
SDC2-202ENST00000518385 OTUB1Q96FW1 271 aaPredicted RBP16.96■□□□□ 0.31
SDC2-202ENST00000518385 TCTN2Q96GX1 697 aa16.96■□□□□ 0.31
SDC2-202ENST00000518385 MS4A4EQ96PG1 132 aa16.96■□□□□ 0.31
SDC2-202ENST00000518385 DCLRE1CQ96SD1 692 aaKnown RBP16.96■□□□□ 0.31
SDC2-202ENST00000518385 RAB33BQ9H082 229 aa16.96■□□□□ 0.31
SDC2-202ENST00000518385 SAP130Q9H0E3 1048 aa16.96■□□□□ 0.31
SDC2-202ENST00000518385 IL21RQ9HBE5 538 aa16.96■□□□□ 0.31
SDC2-202ENST00000518385 INPP5EQ9NRR6 644 aa16.96■□□□□ 0.31
SDC2-202ENST00000518385 TP53BP1Q12888 1972 aaPredicted RBP16.96■□□□□ 0.31
SDC2-202ENST00000518385 A0A087WV62 115 aa16.95■□□□□ 0.3
SDC2-202ENST00000518385 C7orf66A4D0T2 115 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms