RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 ZMYND19Q96E35 227 aaPredicted RBP10.14□□□□□ -0.79
PCDHGA1-202ENST00000517417 MS4A4EQ96PG1 132 aa10.14□□□□□ -0.79
PCDHGA1-202ENST00000517417 LRRN3Q9H3W5 708 aa10.14□□□□□ -0.79
PCDHGA1-202ENST00000517417 GALNT9Q9HCQ5 603 aa10.14□□□□□ -0.79
PCDHGA1-202ENST00000517417 OR6C2Q9NZP2 312 aa10.14□□□□□ -0.79
PCDHGA1-202ENST00000517417 RARRES3Q9UL19 164 aa10.14□□□□□ -0.79
PCDHGA1-202ENST00000517417 YARS2Q9Y2Z4 477 aaKnown RBP10.14□□□□□ -0.79
PCDHGA1-202ENST00000517417 RFPL3O75679 317 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 OR7A10O76100 309 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 RLN2P04090 185 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 MAS1P04201 325 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 NR2C1P13056 603 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 FGFBP1Q14512 234 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 ARHGAP19Q14CB8 494 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 RAET1LQ5VY80 246 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 LEG1Q6P5S2 330 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 CDS1Q92903 461 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 OR4K3Q96R72 315 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 SLC6A15Q9H2J7 730 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 CXorf36Q9H7Y0 433 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 RXFP3Q9NSD7 469 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 NUDT15Q9NV35 164 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 NDUFB11Q9NX14 153 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 DIMT1Q9UNQ2 313 aaKnown RBP10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 PRSS38A1L453 326 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 OR2AT4A6NND4 320 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 PRAMEF26H0Y7S4 382 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 RAD1O60671 282 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 ZNF217O75362 1048 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 ACTC1P68032 377 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 ACTA1P68133 377 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 SSX1Q16384 188 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 SAXO2Q658L1 398 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 RNF165Q6ZSG1 346 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 CREB3L1Q96BA8 519 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 ZNF582Q96NG8 517 aaPredicted RBP10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 SERINC2Q96SA4 455 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 SAP130Q9H0E3 1048 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 QRSL1Q9H0R6 528 aaKnown RBP10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 RABL2AQ9UBK7 228 aaPredicted RBP10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 UBQLN2Q9UHD9 624 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 KLHL21Q9UJP4 597 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 SCML1Q9UN30 329 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 ERVK-19Q9WJR5 959 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 TRAPPC4Q9Y296 219 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 SEC14L5O43304 696 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 GYPBP06028 91 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 ARSBP15848 533 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 PRKACBP22694 351 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 PER3P56645 1201 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 RRAS2P62070 204 aaPredicted RBP10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 MBTPS1Q14703 1052 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 LRRC37A5PQ49AS3 106 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 TMEM69Q5SWH9 247 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 FAM205BPQ63HN1 556 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 ARHGAP11AQ6P4F7 1023 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 SLCO4C1Q6ZQN7 724 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 SYT14Q8NB59 555 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 INO80EQ8NBZ0 244 aaPredicted RBP10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 ACOT12Q8WYK0 555 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 CHFRQ96EP1 664 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 MED30Q96HR3 178 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 EGLN3Q9H6Z9 239 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 TM7SF3Q9NS93 570 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 CPNE7Q9UBL6 633 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 EPHA6Q9UF33 1036 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 TEX13DA0A0J9YY54 714 aaPredicted RBP10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 H3BML4 177 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 KIAA0355O15063 1070 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 FBXO45P0C2W1 286 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 ACP2P11117 423 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 LCN1P31025 176 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 ETV6P41212 452 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 IFITM2Q01629 132 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 SNTB2Q13425 540 aaKnown RBP10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 KIR2DS3Q14952 304 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 TCTE1Q5JU00 501 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 SPIN3Q5JUX0 258 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 RBM45Q8IUH3 476 aaKnown RBP10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 SPPL3Q8TCT6 385 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 C15orf40Q8WUR7 153 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 SPRYD4Q8WW59 207 aaPredicted RBP10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 TREX2Q9BQ50 279 aaPredicted RBP10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 PELOQ9BRX2 385 aaKnown RBP10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 TMEM168Q9H0V1 697 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 NIPAL2Q9H841 368 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 GSKIPQ9P0R6 139 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 ENTPD2Q9Y5L3 495 aa10.13□□□□□ -0.79
PCDHGA1-202ENST00000517417 A0A0G2JMZ2 1700 aa10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 LRRC37A2A6NM11 1700 aa10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 KCNE1BA0A087WTH5 132 aa10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 TMEM202A6NGA9 273 aa10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 C17orf105B2RV13 164 aa10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 GFYI3L273 518 aa10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 M0R233 179 aa10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 RBBP9O75884 186 aa10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 PRKXP51817 358 aa10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 CCINQ13939 588 aa10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 GLCCI1Q86VQ1 547 aa10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 COMMD7Q86VX2 200 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms