RNA–Protein interactions for RNA: ENST00000516379.1

SNORA40.13-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 120 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.13-201ENST00000516379 VSTM4Q8IW00 320 aa-1.22□□□□□ -2.6
SNORA40.13-201ENST00000516379 NAXEQ8NCW5 288 aa-1.22□□□□□ -2.6
SNORA40.13-201ENST00000516379 RDH11Q8TC12 318 aa-1.22□□□□□ -2.6
SNORA40.13-201ENST00000516379 DLX4Q92988 240 aaPredicted RBP-1.22□□□□□ -2.6
SNORA40.13-201ENST00000516379 FAM120BQ96EK7 910 aaKnown RBP-1.22□□□□□ -2.6
SNORA40.13-201ENST00000516379 TSG101Q99816 390 aa-1.22□□□□□ -2.6
SNORA40.13-201ENST00000516379 DNTTIP1Q9H147 329 aa-1.22□□□□□ -2.6
SNORA40.13-201ENST00000516379 LY9Q9HBG7 655 aa-1.22□□□□□ -2.6
SNORA40.13-201ENST00000516379 GPR173Q9NS66 373 aa-1.22□□□□□ -2.6
SNORA40.13-201ENST00000516379 KIF25Q9UIL4 384 aa-1.22□□□□□ -2.6
SNORA40.13-201ENST00000516379 ATG2BQ96BY7 2078 aa-1.22□□□□□ -2.61
SNORA40.13-201ENST00000516379 MUC2Q02817 5179 aa-1.22□□□□□ -2.61
SNORA40.13-201ENST00000516379 A0A0J9YVX5 310 aa-1.23□□□□□ -2.61
SNORA40.13-201ENST00000516379 IGHV5-10-1A0A0J9YXX1 117 aa-1.23□□□□□ -2.61
SNORA40.13-201ENST00000516379 E9PBE3 544 aa-1.23□□□□□ -2.61
SNORA40.13-201ENST00000516379 F5H0A9 414 aaPredicted RBP-1.23□□□□□ -2.61
SNORA40.13-201ENST00000516379 PEX14O75381 377 aa-1.23□□□□□ -2.61
SNORA40.13-201ENST00000516379 TXNDC12O95881 172 aa-1.23□□□□□ -2.61
SNORA40.13-201ENST00000516379 IGSF6O95976 241 aa-1.23□□□□□ -2.61
SNORA40.13-201ENST00000516379 IGHV1-8P0DP01 117 aa-1.23□□□□□ -2.61
SNORA40.13-201ENST00000516379 RPL4P36578 427 aaKnown RBP-1.23□□□□□ -2.61
SNORA40.13-201ENST00000516379 RND3P61587 244 aa-1.23□□□□□ -2.61
SNORA40.13-201ENST00000516379 RAP1AP62834 184 aa-1.23□□□□□ -2.61
SNORA40.13-201ENST00000516379 ZNF763Q0D2J5 394 aa-1.23□□□□□ -2.61
SNORA40.13-201ENST00000516379 HSP90AB2PQ58FF8 381 aa-1.23□□□□□ -2.61
SNORA40.13-201ENST00000516379 STUMQ69YW2 141 aa-1.23□□□□□ -2.61
SNORA40.13-201ENST00000516379 ENOSF1Q7L5Y1 443 aa-1.23□□□□□ -2.61
SNORA40.13-201ENST00000516379 ARCQ7LC44 396 aa-1.23□□□□□ -2.61
SNORA40.13-201ENST00000516379 BIVMQ86UB2 503 aa-1.23□□□□□ -2.61
SNORA40.13-201ENST00000516379 SYT2Q8N9I0 419 aaPredicted RBP-1.23□□□□□ -2.61
SNORA40.13-201ENST00000516379 ARPC1AQ92747 370 aa-1.23□□□□□ -2.61
SNORA40.13-201ENST00000516379 TM4SF19Q96DZ7 209 aa-1.23□□□□□ -2.61
SNORA40.13-201ENST00000516379 ZNF558Q96NG5 402 aa-1.23□□□□□ -2.61
SNORA40.13-201ENST00000516379 APOOQ9BUR5 198 aa-1.23□□□□□ -2.61
SNORA40.13-201ENST00000516379 CHAC1Q9BUX1 264 aa-1.23□□□□□ -2.61
SNORA40.13-201ENST00000516379 AASSQ9UDR5 926 aa-1.23□□□□□ -2.61
SNORA40.13-201ENST00000516379 PSORS1C1Q9UIG5 152 aa-1.23□□□□□ -2.61
SNORA40.13-201ENST00000516379 PURGQ9UJV8 347 aaKnown RBP-1.23□□□□□ -2.61
SNORA40.13-201ENST00000516379 USP16Q9Y5T5 823 aa-1.23□□□□□ -2.61
SNORA40.13-201ENST00000516379 HEBP2Q9Y5Z4 205 aa-1.23□□□□□ -2.61
SNORA40.13-201ENST00000516379 LOC100131303A0A0U1RQF7 123 aa-1.24□□□□□ -2.61
SNORA40.13-201ENST00000516379 A0A1B0GUL7 405 aa-1.24□□□□□ -2.61
SNORA40.13-201ENST00000516379 A0A1B0GVC2 190 aa-1.24□□□□□ -2.61
SNORA40.13-201ENST00000516379 ARHGEF35A5YM69 484 aa-1.24□□□□□ -2.61
SNORA40.13-201ENST00000516379 HELTA6NFD8 242 aa-1.24□□□□□ -2.61
SNORA40.13-201ENST00000516379 ZNF860A6NHJ4 632 aa-1.24□□□□□ -2.61
SNORA40.13-201ENST00000516379 SDR42E2A6NKP2 422 aa-1.24□□□□□ -2.61
SNORA40.13-201ENST00000516379 A8MUI8 341 aa-1.24□□□□□ -2.61
SNORA40.13-201ENST00000516379 INS-IGF2F8WCM5 200 aa-1.24□□□□□ -2.61
SNORA40.13-201ENST00000516379 RHOBTB1O94844 696 aa-1.24□□□□□ -2.61
SNORA40.13-201ENST00000516379 OLFM2O95897 454 aa-1.24□□□□□ -2.61
SNORA40.13-201ENST00000516379 IGHDP01880 384 aa-1.24□□□□□ -2.61
SNORA40.13-201ENST00000516379 CD74P04233 296 aa-1.24□□□□□ -2.61
SNORA40.13-201ENST00000516379 ABCB1P08183 1280 aaPredicted RBP-1.24□□□□□ -2.61
SNORA40.13-201ENST00000516379 IGFBP1P08833 259 aaPredicted RBP-1.24□□□□□ -2.61
SNORA40.13-201ENST00000516379 CT45A8P0DMV1 189 aa-1.24□□□□□ -2.61
SNORA40.13-201ENST00000516379 CT45A9P0DMV2 189 aa-1.24□□□□□ -2.61
SNORA40.13-201ENST00000516379 GCFC2P16383 781 aaKnown RBP-1.24□□□□□ -2.61
SNORA40.13-201ENST00000516379 NTHL1P78549 312 aa-1.24□□□□□ -2.61
SNORA40.13-201ENST00000516379 MZT1Q08AG7 82 aa-1.24□□□□□ -2.61
SNORA40.13-201ENST00000516379 BNIP1Q12981 228 aa-1.24□□□□□ -2.61
SNORA40.13-201ENST00000516379 ACKR1Q16570 336 aa-1.24□□□□□ -2.61
SNORA40.13-201ENST00000516379 UGCGQ16739 394 aa-1.24□□□□□ -2.61
SNORA40.13-201ENST00000516379 CT45A2Q5DJT8 189 aa-1.24□□□□□ -2.61
SNORA40.13-201ENST00000516379 C1orf100Q5SVJ3 147 aa-1.24□□□□□ -2.61
SNORA40.13-201ENST00000516379 STAC2Q6ZMT1 411 aa-1.24□□□□□ -2.61
SNORA40.13-201ENST00000516379 C16orf47Q6ZP98 133 aaPredicted RBP-1.24□□□□□ -2.61
SNORA40.13-201ENST00000516379 TRIM69Q86WT6 500 aa-1.24□□□□□ -2.61
SNORA40.13-201ENST00000516379 ZNF563Q8TA94 476 aa-1.24□□□□□ -2.61
SNORA40.13-201ENST00000516379 MCOLN3Q8TDD5 553 aa-1.24□□□□□ -2.61
SNORA40.13-201ENST00000516379 C10orf105Q8TEF2 133 aa-1.24□□□□□ -2.61
SNORA40.13-201ENST00000516379 PGAP3Q96FM1 320 aaPredicted RBP-1.24□□□□□ -2.61
SNORA40.13-201ENST00000516379 CELF6Q96J87 481 aaKnown RBP-1.24□□□□□ -2.61
SNORA40.13-201ENST00000516379 GCNAQ96QF7 691 aa-1.24□□□□□ -2.61
SNORA40.13-201ENST00000516379 RBM28Q9NW13 759 aaKnown RBP-1.24□□□□□ -2.61
SNORA40.13-201ENST00000516379 GPATCH2LQ9NWQ4 482 aa-1.24□□□□□ -2.61
SNORA40.13-201ENST00000516379 ATP6V1HQ9UI12 483 aa-1.24□□□□□ -2.61
SNORA40.13-201ENST00000516379 DIMT1Q9UNQ2 313 aaKnown RBP-1.24□□□□□ -2.61
SNORA40.13-201ENST00000516379 KCNK6Q9Y257 313 aa-1.24□□□□□ -2.61
SNORA40.13-201ENST00000516379 DHRS7Q9Y394 339 aa-1.24□□□□□ -2.61
SNORA40.13-201ENST00000516379 AMMECR1Q9Y4X0 333 aaPredicted RBP-1.24□□□□□ -2.61
SNORA40.13-201ENST00000516379 MDC1Q14676 2089 aaKnown RBP-1.24□□□□□ -2.61
SNORA40.13-201ENST00000516379 CUL9Q8IWT3 2517 aa-1.25□□□□□ -2.61
SNORA40.13-201ENST00000516379 ILVBLA1L0T0 632 aa-1.25□□□□□ -2.61
SNORA40.13-201ENST00000516379 C19orf71A6NCJ1 209 aa-1.25□□□□□ -2.61
SNORA40.13-201ENST00000516379 LRIT2A6NDA9 550 aa-1.25□□□□□ -2.61
SNORA40.13-201ENST00000516379 K7EMT4 169 aa-1.25□□□□□ -2.61
SNORA40.13-201ENST00000516379 FSTL3O95633 263 aa-1.25□□□□□ -2.61
SNORA40.13-201ENST00000516379 LALBAP00709 142 aa-1.25□□□□□ -2.61
SNORA40.13-201ENST00000516379 GNAO1P09471 354 aa-1.25□□□□□ -2.61
SNORA40.13-201ENST00000516379 TPBGLP0DKB5 382 aa-1.25□□□□□ -2.61
SNORA40.13-201ENST00000516379 DCKP27707 260 aa-1.25□□□□□ -2.61
SNORA40.13-201ENST00000516379 MAN1A1P33908 653 aa-1.25□□□□□ -2.61
SNORA40.13-201ENST00000516379 NPY4RP50391 375 aa-1.25□□□□□ -2.61
SNORA40.13-201ENST00000516379 TGFBR3Q03167 851 aa-1.25□□□□□ -2.61
SNORA40.13-201ENST00000516379 FUT5Q11128 374 aa-1.25□□□□□ -2.61
SNORA40.13-201ENST00000516379 TPBGQ13641 420 aa-1.25□□□□□ -2.61
SNORA40.13-201ENST00000516379 ALCAMQ13740 583 aa-1.25□□□□□ -2.61
SNORA40.13-201ENST00000516379 NFE2L1Q14494 772 aa-1.25□□□□□ -2.61
SNORA40.13-201ENST00000516379 ATF7IP2Q5U623 682 aa-1.25□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms