RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 PRKCAP17252 672 aa10.77□□□□□ -0.69
SNF8-215ENST00000515572 TCEA1P23193 301 aaKnown RBP10.77□□□□□ -0.69
SNF8-215ENST00000515572 ELK4P28324 431 aa10.77□□□□□ -0.69
SNF8-215ENST00000515572 PTGER4P35408 488 aa10.77□□□□□ -0.69
SNF8-215ENST00000515572 CA7P43166 264 aa10.77□□□□□ -0.69
SNF8-215ENST00000515572 PLAURQ03405 335 aa10.77□□□□□ -0.69
SNF8-215ENST00000515572 EIF2S3LQ2VIR3 472 aaKnown RBP10.77□□□□□ -0.69
SNF8-215ENST00000515572 GXYLT1Q4G148 440 aa10.77□□□□□ -0.69
SNF8-215ENST00000515572 SLC25A53Q5H9E4 307 aa10.77□□□□□ -0.69
SNF8-215ENST00000515572 SAMD4BQ5PRF9 694 aaKnown RBP10.77□□□□□ -0.69
SNF8-215ENST00000515572 CD163Q86VB7 1156 aa10.77□□□□□ -0.69
SNF8-215ENST00000515572 CLIP4Q8N3C7 705 aa10.77□□□□□ -0.69
SNF8-215ENST00000515572 SLC26A7Q8TE54 656 aa10.77□□□□□ -0.69
SNF8-215ENST00000515572 RELTQ969Z4 430 aa10.77□□□□□ -0.69
SNF8-215ENST00000515572 PINK1Q9BXM7 581 aa10.77□□□□□ -0.69
SNF8-215ENST00000515572 PRDM14Q9GZV8 571 aa10.77□□□□□ -0.69
SNF8-215ENST00000515572 TP63Q9H3D4 680 aaPredicted RBP10.77□□□□□ -0.69
SNF8-215ENST00000515572 PNPLA3Q9NST1 481 aa10.77□□□□□ -0.69
SNF8-215ENST00000515572 RLIMQ9NVW2 624 aa10.77□□□□□ -0.69
SNF8-215ENST00000515572 ADA2Q9NZK5 511 aa10.77□□□□□ -0.69
SNF8-215ENST00000515572 TMEM181Q9P2C4 612 aa10.77□□□□□ -0.69
SNF8-215ENST00000515572 SLC13A4Q9UKG4 626 aa10.77□□□□□ -0.69
SNF8-215ENST00000515572 AP4B1Q9Y6B7 739 aa10.77□□□□□ -0.69
SNF8-215ENST00000515572 RP1L1Q8IWN7 2480 aaPredicted RBP10.77□□□□□ -0.69
SNF8-215ENST00000515572 NBASA2RRP1 2371 aa10.76□□□□□ -0.69
SNF8-215ENST00000515572 ARHGAP21Q5T5U3 1957 aa10.76□□□□□ -0.69
SNF8-215ENST00000515572 POLEQ07864 2286 aa10.76□□□□□ -0.69
SNF8-215ENST00000515572 AHRRA9YTQ3 701 aa10.76□□□□□ -0.69
SNF8-215ENST00000515572 B2RBV5 119 aa10.76□□□□□ -0.69
SNF8-215ENST00000515572 GCM2O75603 506 aaPredicted RBP10.76□□□□□ -0.69
SNF8-215ENST00000515572 NTN1O95631 604 aa10.76□□□□□ -0.69
SNF8-215ENST00000515572 C8BP07358 591 aa10.76□□□□□ -0.69
SNF8-215ENST00000515572 GP1BBP13224 206 aa10.76□□□□□ -0.69
SNF8-215ENST00000515572 ZNF708P17019 499 aa10.76□□□□□ -0.69
SNF8-215ENST00000515572 POU3F2P20265 443 aaPredicted RBP10.76□□□□□ -0.69
SNF8-215ENST00000515572 PSMA4P25789 261 aaKnown RBP10.76□□□□□ -0.69
SNF8-215ENST00000515572 KDELR2P33947 212 aa10.76□□□□□ -0.69
SNF8-215ENST00000515572 RYKP34925 604 aa10.76□□□□□ -0.69
SNF8-215ENST00000515572 HTR3AP46098 478 aa10.76□□□□□ -0.69
SNF8-215ENST00000515572 GSK3BP49841 420 aa10.76□□□□□ -0.69
SNF8-215ENST00000515572 LHX2P50458 406 aa10.76□□□□□ -0.69
SNF8-215ENST00000515572 DLX5P56178 289 aa10.76□□□□□ -0.69
SNF8-215ENST00000515572 SLC25A3Q00325 362 aa10.76□□□□□ -0.69
SNF8-215ENST00000515572 EPS8Q12929 822 aa10.76□□□□□ -0.69
SNF8-215ENST00000515572 FOXF1Q12946 379 aa10.76□□□□□ -0.69
SNF8-215ENST00000515572 C3AR1Q16581 482 aa10.76□□□□□ -0.69
SNF8-215ENST00000515572 C4orf17Q53FE4 359 aa10.76□□□□□ -0.69
SNF8-215ENST00000515572 ZNF585AQ6P3V2 769 aa10.76□□□□□ -0.69
SNF8-215ENST00000515572 MTFR2Q6P444 385 aa10.76□□□□□ -0.69
SNF8-215ENST00000515572 DOLPP1Q86YN1 238 aa10.76□□□□□ -0.69
SNF8-215ENST00000515572 DEFB107AQ8IZN7 70 aa10.76□□□□□ -0.69
SNF8-215ENST00000515572 ARHGAP24Q8N264 748 aa10.76□□□□□ -0.69
SNF8-215ENST00000515572 FBXO27Q8NI29 283 aa10.76□□□□□ -0.69
SNF8-215ENST00000515572 ZNF563Q8TA94 476 aa10.76□□□□□ -0.69
SNF8-215ENST00000515572 RNF145Q96MT1 663 aa10.76□□□□□ -0.69
SNF8-215ENST00000515572 KCTD14Q9BQ13 255 aaPredicted RBP10.76□□□□□ -0.69
SNF8-215ENST00000515572 KLHDC3Q9BQ90 382 aa10.76□□□□□ -0.69
SNF8-215ENST00000515572 C1orf21Q9H246 121 aa10.76□□□□□ -0.69
SNF8-215ENST00000515572 ACER3Q9NUN7 267 aa10.76□□□□□ -0.69
SNF8-215ENST00000515572 TINAGQ9UJW2 476 aa10.76□□□□□ -0.69
SNF8-215ENST00000515572 ZNF337Q9Y3M9 751 aa10.76□□□□□ -0.69
SNF8-215ENST00000515572 CHST2Q9Y4C5 530 aa10.76□□□□□ -0.69
SNF8-215ENST00000515572 PHF3Q92576 2039 aaKnown RBP10.75□□□□□ -0.69
SNF8-215ENST00000515572 SMG1Q96Q15 3661 aaKnown RBP10.75□□□□□ -0.69
SNF8-215ENST00000515572 GJE1A6NN92 205 aa10.75□□□□□ -0.69
SNF8-215ENST00000515572 E9PLN8 166 aa10.75□□□□□ -0.69
SNF8-215ENST00000515572 H3BML4 177 aa10.75□□□□□ -0.69
SNF8-215ENST00000515572 PYCARD-AS1I3L0S3 204 aa10.75□□□□□ -0.69
SNF8-215ENST00000515572 SYT5O00445 386 aa10.75□□□□□ -0.69
SNF8-215ENST00000515572 GSTA4O15217 222 aa10.75□□□□□ -0.69
SNF8-215ENST00000515572 ZNHIT1O43257 154 aa10.75□□□□□ -0.69
SNF8-215ENST00000515572 TPST1O60507 370 aa10.75□□□□□ -0.69
SNF8-215ENST00000515572 T-ENOLP0DO92 83 aa10.75□□□□□ -0.69
SNF8-215ENST00000515572 ME2P23368 584 aa10.75□□□□□ -0.69
SNF8-215ENST00000515572 FKBP2P26885 142 aaKnown RBP10.75□□□□□ -0.69
SNF8-215ENST00000515572 ACVR2AP27037 513 aa10.75□□□□□ -0.69
SNF8-215ENST00000515572 HTR1EP28566 365 aa10.75□□□□□ -0.69
SNF8-215ENST00000515572 CPOXP36551 454 aa10.75□□□□□ -0.69
SNF8-215ENST00000515572 ACAA2P42765 397 aaKnown RBP10.75□□□□□ -0.69
SNF8-215ENST00000515572 KCNJ5P48544 419 aa10.75□□□□□ -0.69
SNF8-215ENST00000515572 IDH2P48735 452 aaKnown RBP10.75□□□□□ -0.69
SNF8-215ENST00000515572 PER3P56645 1201 aa10.75□□□□□ -0.69
SNF8-215ENST00000515572 SESN3P58005 492 aa10.75□□□□□ -0.69
SNF8-215ENST00000515572 COPZ1P61923 177 aa10.75□□□□□ -0.69
SNF8-215ENST00000515572 RAC1P63000 192 aa10.75□□□□□ -0.69
SNF8-215ENST00000515572 KCNC4Q03721 635 aa10.75□□□□□ -0.69
SNF8-215ENST00000515572 DMTNQ08495 405 aa10.75□□□□□ -0.69
SNF8-215ENST00000515572 SELENBP1Q13228 472 aa10.75□□□□□ -0.69
SNF8-215ENST00000515572 TOMM34Q15785 309 aaPredicted RBP10.75□□□□□ -0.69
SNF8-215ENST00000515572 EMC4Q5J8M3 183 aa10.75□□□□□ -0.69
SNF8-215ENST00000515572 DCST1Q5T197 706 aa10.75□□□□□ -0.69
SNF8-215ENST00000515572 C1QL3Q5VWW1 255 aa10.75□□□□□ -0.69
SNF8-215ENST00000515572 GRINAQ7Z429 371 aa10.75□□□□□ -0.69
SNF8-215ENST00000515572 ULK2Q8IYT8 1036 aa10.75□□□□□ -0.69
SNF8-215ENST00000515572 MEIOBQ8N635 442 aa10.75□□□□□ -0.69
SNF8-215ENST00000515572 RBM15BQ8NDT2 890 aaKnown RBP10.75□□□□□ -0.69
SNF8-215ENST00000515572 OR5M1Q8NGP8 315 aa10.75□□□□□ -0.69
SNF8-215ENST00000515572 POC1BQ8TC44 478 aa10.75□□□□□ -0.69
SNF8-215ENST00000515572 TAMM41Q96BW9 452 aa10.75□□□□□ -0.69
SNF8-215ENST00000515572 WDYHV1Q96HA8 205 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms