RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 CHTF18Q8WVB6 975 aa6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 SDHCQ99643 169 aaPredicted RBP6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 SMURF2Q9HAU4 748 aa6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 C1orf109Q9NX04 203 aa6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 ARL15Q9NXU5 204 aa6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 NCDNQ9UBB6 729 aa6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 TRANK1O15050 2925 aa6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 TEX13DA0A0J9YY54 714 aaPredicted RBP6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 PTGES3LE9PB15 166 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 EREGO14944 169 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 IGF2P01344 180 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 AVPR2P30518 371 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 SCN1BQ07699 218 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 BOP1Q14137 746 aaKnown RBP6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 SLC9A3R2Q15599 337 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 CPSF6Q16630 551 aaKnown RBP eCLIP6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 DPY19L1Q2PZI1 675 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 ZNF468Q5VIY5 522 aaPredicted RBP6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 DET1Q7L5Y6 550 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 LRRC70Q7Z2Q7 622 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 RANBP3LQ86VV4 465 aaPredicted RBP6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 PHACTR4Q8IZ21 702 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 OR2T12Q8NG77 320 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 ADAMTS18Q8TE60 1221 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 NPRL2Q8WTW4 380 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 SLC38A4Q969I6 547 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 TMBIM1Q969X1 311 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 MRPS24Q96EL2 167 aaKnown RBP6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 SLC30A2Q9BRI3 323 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 DPY30Q9C005 99 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 SRRQ9GZT4 340 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 MTIF3Q9H2K0 278 aaKnown RBP6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 PRDM13Q9H4Q3 707 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 ZBTB20Q9HC78 741 aaPredicted RBP6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 USE1Q9NZ43 259 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 PCDHB14Q9Y5E9 798 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 XIRP2A4UGR9 3374 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 DISC1C4P0D8 188 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 GRM6O15303 877 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 CCL16O15467 120 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 EGFP01133 1207 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 MPC1LP0DKB6 136 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 SDC1P18827 310 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 CD22P20273 847 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 PRKACGP22612 351 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 UQCRC2P22695 453 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 S100A11P31949 105 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 ACSM1Q08AH1 577 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 C14orf28Q4W4Y0 310 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 CDPF1Q6NVV7 123 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 RPUSD3Q6P087 351 aaKnown RBP6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 SLC29A4Q7RTT9 530 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 HSD11B1LQ7Z5J1 315 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 GCNT2Q8N0V5 402 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 RNF175Q8N4F7 328 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.97□□□□□ -1.299e-15■■■□□ 17.6
PDLIM5-219ENST00000514743 CCDC107Q8WV48 283 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 PYCR2Q96C36 320 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 ITCHQ96J02 903 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 FCRL1Q96LA6 429 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 MRGPRX3Q96LB0 322 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 TSNAXQ99598 290 aaKnown RBP6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 CDCP1Q9H5V8 836 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 FAM86C1Q9NVL1 165 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 FAM120CQ9NX05 1096 aaKnown RBP6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 GSKIPQ9P0R6 139 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 IL17BQ9UHF5 180 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 LRIT2A6NDA9 550 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 TMEM202A6NGA9 273 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 C8GP07360 202 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 CTSLP07711 333 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 ATP1B2P14415 290 aaPredicted RBP6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 AKT1P31749 480 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 AFF3P51826 1226 aaKnown RBP6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 CLDN8P56748 225 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 PFN3P60673 137 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 RPS14P62263 151 aaKnown RBP6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 HTRA3P83110 453 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 HOXC5Q00444 222 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 HYAL2Q12891 473 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 SLAQ13239 276 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 LAPTM4AQ15012 233 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 EIF4HQ15056 248 aaKnown RBP6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 ZNF284Q2VY69 593 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 CHRFAM7AQ494W8 412 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 BEX5Q5H9J7 111 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 C9orf64Q5T6V5 341 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 KIAA0907Q7Z7F0 614 aaPredicted RBP6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 KREMEN2Q8NCW0 462 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 AP3S1Q92572 193 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 SCAMP4Q969E2 229 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 ULK4Q96C45 1275 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 AURKBQ96GD4 344 aaPredicted RBP6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 APIPQ96GX9 242 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 FAM71F1Q96KD3 344 aaPredicted RBP6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 INPP5KQ9BT40 448 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 THUMPD3Q9BV44 507 aaKnown RBP6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 ZNF222Q9UK12 451 aa6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 PPIEQ9UNP9 301 aaKnown RBP6.97□□□□□ -1.29
PDLIM5-219ENST00000514743 HCFC2Q9Y5Z7 792 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms