RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 EPS15L1Q9UBC2 864 aa3.58□□□□□ -1.84
HMGCS1-207ENST00000514610 BLOC1S6Q9UL45 172 aa3.58□□□□□ -1.84
HMGCS1-207ENST00000514610 UBQLN1Q9UMX0 589 aaKnown RBP3.58□□□□□ -1.84
HMGCS1-207ENST00000514610 ALG6Q9Y672 507 aa3.58□□□□□ -1.84
HMGCS1-207ENST00000514610 IGHV2-70DA0A0C4DH43 119 aa3.57□□□□□ -1.84
HMGCS1-207ENST00000514610 A0A1B0GWB2 263 aa3.57□□□□□ -1.84
HMGCS1-207ENST00000514610 FAM231BA6NCW3 169 aa3.57□□□□□ -1.84
HMGCS1-207ENST00000514610 K7N7A8 449 aa3.57□□□□□ -1.84
HMGCS1-207ENST00000514610 TBL1XO60907 577 aa3.57□□□□□ -1.84
HMGCS1-207ENST00000514610 IDH1O75874 414 aaKnown RBP3.57□□□□□ -1.84
HMGCS1-207ENST00000514610 TIMP1P01033 207 aa3.57□□□□□ -1.84
HMGCS1-207ENST00000514610 IQCF3P0C7M6 154 aa3.57□□□□□ -1.84
HMGCS1-207ENST00000514610 CD1EP15812 388 aa3.57□□□□□ -1.84
HMGCS1-207ENST00000514610 ATP6V1C1P21283 382 aa3.57□□□□□ -1.84
HMGCS1-207ENST00000514610 HNRNPA2B1P22626 353 aaKnown RBP3.57□□□□□ -1.84
HMGCS1-207ENST00000514610 AQP1P29972 269 aa3.57□□□□□ -1.84
HMGCS1-207ENST00000514610 EPHX2P34913 555 aa3.57□□□□□ -1.84
HMGCS1-207ENST00000514610 RGS4P49798 205 aa3.57□□□□□ -1.84
HMGCS1-207ENST00000514610 ELAVL3Q14576 367 aaKnown RBP3.57□□□□□ -1.84
HMGCS1-207ENST00000514610 MXD4Q14582 209 aaPredicted RBP3.57□□□□□ -1.84
HMGCS1-207ENST00000514610 KYAT1Q16773 422 aa3.57□□□□□ -1.84
HMGCS1-207ENST00000514610 LIPNQ5VXI9 398 aa3.57□□□□□ -1.84
HMGCS1-207ENST00000514610 SCARA5Q6ZMJ2 495 aa3.57□□□□□ -1.84
HMGCS1-207ENST00000514610 C16orf62Q7Z3J2 963 aa3.57□□□□□ -1.84
HMGCS1-207ENST00000514610 PPP1R27Q86WC6 154 aa3.57□□□□□ -1.84
HMGCS1-207ENST00000514610 KIR3DL3Q8N743 410 aa3.57□□□□□ -1.84
HMGCS1-207ENST00000514610 THRSPQ92748 146 aa3.57□□□□□ -1.84
HMGCS1-207ENST00000514610 TNRQ92752 1358 aa3.57□□□□□ -1.84
HMGCS1-207ENST00000514610 FRAT1Q92837 279 aaPredicted RBP3.57□□□□□ -1.84
HMGCS1-207ENST00000514610 MS4A14Q96JA4 679 aa3.57□□□□□ -1.84
HMGCS1-207ENST00000514610 ZIM3Q96PE6 472 aa3.57□□□□□ -1.84
HMGCS1-207ENST00000514610 CNPY3Q9BT09 278 aa3.57□□□□□ -1.84
HMGCS1-207ENST00000514610 ALG12Q9BV10 488 aa3.57□□□□□ -1.84
HMGCS1-207ENST00000514610 RIBC2Q9H4K1 309 aa3.57□□□□□ -1.84
HMGCS1-207ENST00000514610 PTGES2Q9H7Z7 377 aa3.57□□□□□ -1.84
HMGCS1-207ENST00000514610 ABCB10Q9NRK6 738 aa3.57□□□□□ -1.84
HMGCS1-207ENST00000514610 CELA1Q9UNI1 258 aa3.57□□□□□ -1.84
HMGCS1-207ENST00000514610 WDR45Q9Y484 360 aa3.57□□□□□ -1.84
HMGCS1-207ENST00000514610 OR10H1Q9Y4A9 318 aa3.57□□□□□ -1.84
HMGCS1-207ENST00000514610 IGHV7-81A0A0B4J1V7 117 aa3.56□□□□□ -1.84
HMGCS1-207ENST00000514610 VSTM2BA6NLU5 285 aa3.56□□□□□ -1.84
HMGCS1-207ENST00000514610 SULT2B1O00204 365 aa3.56□□□□□ -1.84
HMGCS1-207ENST00000514610 TBX19O60806 448 aa3.56□□□□□ -1.84
HMGCS1-207ENST00000514610 IGHV3-48P01763 117 aa3.56□□□□□ -1.84
HMGCS1-207ENST00000514610 NMT1P30419 496 aaKnown RBP3.56□□□□□ -1.84
HMGCS1-207ENST00000514610 SLC26A2P50443 739 aa3.56□□□□□ -1.84
HMGCS1-207ENST00000514610 AP3M2P53677 418 aa3.56□□□□□ -1.84
HMGCS1-207ENST00000514610 HSD17B7P56937 341 aa3.56□□□□□ -1.84
HMGCS1-207ENST00000514610 CSTF1Q05048 431 aaKnown RBP3.56□□□□□ -1.84
HMGCS1-207ENST00000514610 SYPL1Q16563 259 aa3.56□□□□□ -1.84
HMGCS1-207ENST00000514610 PDK4Q16654 411 aa3.56□□□□□ -1.84
HMGCS1-207ENST00000514610 ACOT1Q86TX2 421 aa3.56□□□□□ -1.84
HMGCS1-207ENST00000514610 ZNF589Q86UQ0 364 aaPredicted RBP3.56□□□□□ -1.84
HMGCS1-207ENST00000514610 PRR22Q8IZ63 422 aa3.56□□□□□ -1.84
HMGCS1-207ENST00000514610 CLDN19Q8N6F1 224 aa3.56□□□□□ -1.84
HMGCS1-207ENST00000514610 BBS1Q8NFJ9 593 aa3.56□□□□□ -1.84
HMGCS1-207ENST00000514610 NEIL2Q969S2 332 aa3.56□□□□□ -1.84
HMGCS1-207ENST00000514610 B3GALT6Q96L58 329 aa3.56□□□□□ -1.84
HMGCS1-207ENST00000514610 AMDHD1Q96NU7 426 aa3.56□□□□□ -1.84
HMGCS1-207ENST00000514610 TXN2Q99757 166 aa3.56□□□□□ -1.84
HMGCS1-207ENST00000514610 RHBGQ9H310 441 aa3.56□□□□□ -1.84
HMGCS1-207ENST00000514610 SCML2Q9UQR0 700 aa3.56□□□□□ -1.84
HMGCS1-207ENST00000514610 RAI1Q7Z5J4 1906 aaPredicted RBP3.56□□□□□ -1.84
HMGCS1-207ENST00000514610 KIF2AO00139 706 aaPredicted RBP3.55□□□□□ -1.84
HMGCS1-207ENST00000514610 BTN3A3O00478 584 aa3.55□□□□□ -1.84
HMGCS1-207ENST00000514610 H2BFMP0C1H6 154 aa3.55□□□□□ -1.84
HMGCS1-207ENST00000514610 RPA2P15927 270 aa3.55□□□□□ -1.84
HMGCS1-207ENST00000514610 ELK1P19419 428 aa3.55□□□□□ -1.84
HMGCS1-207ENST00000514610 CALB2P22676 271 aa3.55□□□□□ -1.84
HMGCS1-207ENST00000514610 HSPA2P54652 639 aa3.55□□□□□ -1.84
HMGCS1-207ENST00000514610 ZNF45Q02386 682 aa3.55□□□□□ -1.84
HMGCS1-207ENST00000514610 GALNT17Q6IS24 598 aa3.55□□□□□ -1.84
HMGCS1-207ENST00000514610 TMEM179BQ7Z7N9 219 aa3.55□□□□□ -1.84
HMGCS1-207ENST00000514610 LCA5Q86VQ0 697 aa3.55□□□□□ -1.84
HMGCS1-207ENST00000514610 SLC38A6Q8IZM9 456 aa3.55□□□□□ -1.84
HMGCS1-207ENST00000514610 STXBP6Q8NFX7 210 aa3.55□□□□□ -1.84
HMGCS1-207ENST00000514610 SLC5A11Q8WWX8 675 aa3.55□□□□□ -1.84
HMGCS1-207ENST00000514610 CTNNBL1Q8WYA6 563 aaPredicted RBP3.55□□□□□ -1.84
HMGCS1-207ENST00000514610 PELI1Q96FA3 418 aa3.55□□□□□ -1.84
HMGCS1-207ENST00000514610 SRXN1Q9BYN0 137 aa3.55□□□□□ -1.84
HMGCS1-207ENST00000514610 NXF5Q9H1B4 397 aaKnown RBP3.55□□□□□ -1.84
HMGCS1-207ENST00000514610 PDFQ9HBH1 243 aa3.55□□□□□ -1.84
HMGCS1-207ENST00000514610 RAB18Q9NP72 206 aa3.55□□□□□ -1.84
HMGCS1-207ENST00000514610 WARS2Q9UGM6 360 aaKnown RBP3.55□□□□□ -1.84
HMGCS1-207ENST00000514610 A0A1W2PNV4 684 aa3.54□□□□□ -1.84
HMGCS1-207ENST00000514610 NDC80O14777 642 aa3.54□□□□□ -1.84
HMGCS1-207ENST00000514610 PRKYO43930 277 aa3.54□□□□□ -1.84
HMGCS1-207ENST00000514610 GNA14O95837 355 aa3.54□□□□□ -1.84
HMGCS1-207ENST00000514610 PRKXP51817 358 aa3.54□□□□□ -1.84
HMGCS1-207ENST00000514610 GNB2P62879 340 aa3.54□□□□□ -1.84
HMGCS1-207ENST00000514610 TATDN3Q17R31 274 aa3.54□□□□□ -1.84
HMGCS1-207ENST00000514610 TP53I3Q53FA7 332 aa3.54□□□□□ -1.84
HMGCS1-207ENST00000514610 KCNIP4Q6PIL6 250 aa3.54□□□□□ -1.84
HMGCS1-207ENST00000514610 IL34Q6ZMJ4 242 aa3.54□□□□□ -1.84
HMGCS1-207ENST00000514610 DNM1P46Q6ZS02 220 aa3.54□□□□□ -1.84
HMGCS1-207ENST00000514610 TPRA1Q86W33 373 aa3.54□□□□□ -1.84
HMGCS1-207ENST00000514610 CATSPER1Q8NEC5 780 aa3.54□□□□□ -1.84
HMGCS1-207ENST00000514610 OR2T3Q8NH03 318 aa3.54□□□□□ -1.84
HMGCS1-207ENST00000514610 OMDQ99983 421 aa3.54□□□□□ -1.84
HMGCS1-207ENST00000514610 KLHDC3Q9BQ90 382 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms