RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 INAQ16352 499 aa9.25□□□□□ -0.93
NEDD9-214ENST00000513989 PLEKHN1Q494U1 663 aaPredicted RBP9.25□□□□□ -0.93
NEDD9-214ENST00000513989 GLYR1Q49A26 553 aaPredicted RBP9.25□□□□□ -0.93
NEDD9-214ENST00000513989 OR5M10Q6IEU7 315 aa9.25□□□□□ -0.93
NEDD9-214ENST00000513989 RBMXL3Q8N7X1 1067 aaKnown RBP9.25□□□□□ -0.93
NEDD9-214ENST00000513989 WDSUB1Q8N9V3 476 aa9.25□□□□□ -0.93
NEDD9-214ENST00000513989 ZFP62Q8NB50 900 aaPredicted RBP9.25□□□□□ -0.93
NEDD9-214ENST00000513989 CNOT9Q92600 299 aaKnown RBP9.25□□□□□ -0.93
NEDD9-214ENST00000513989 SH3YL1Q96HL8 342 aaPredicted RBP9.25□□□□□ -0.93
NEDD9-214ENST00000513989 PROK2Q9HC23 129 aa9.25□□□□□ -0.93
NEDD9-214ENST00000513989 TUBA8Q9NY65 449 aaPredicted RBP9.25□□□□□ -0.93
NEDD9-214ENST00000513989 MED11Q9P086 117 aa9.25□□□□□ -0.93
NEDD9-214ENST00000513989 DKKL1Q9UK85 242 aa9.25□□□□□ -0.93
NEDD9-214ENST00000513989 MRPS18CQ9Y3D5 142 aaKnown RBP9.25□□□□□ -0.93
NEDD9-214ENST00000513989 DIDO1Q9BTC0 2240 aaKnown RBP9.25□□□□□ -0.93
NEDD9-214ENST00000513989 POLEQ07864 2286 aa9.25□□□□□ -0.93
NEDD9-214ENST00000513989 NUP214P35658 2090 aaPredicted RBP9.24□□□□□ -0.93
NEDD9-214ENST00000513989 ANKUB1A6NFN9 424 aa9.24□□□□□ -0.93
NEDD9-214ENST00000513989 CLDN24A6NM45 220 aa9.24□□□□□ -0.93
NEDD9-214ENST00000513989 LINC01387J3KSC0 135 aa9.24□□□□□ -0.93
NEDD9-214ENST00000513989 FAAHO00519 579 aa9.24□□□□□ -0.93
NEDD9-214ENST00000513989 FMO6PO60774 539 aa9.24□□□□□ -0.93
NEDD9-214ENST00000513989 GP1BBP13224 206 aa9.24□□□□□ -0.93
NEDD9-214ENST00000513989 DPP4P27487 766 aa9.24□□□□□ -0.93
NEDD9-214ENST00000513989 RYKP34925 604 aa9.24□□□□□ -0.93
NEDD9-214ENST00000513989 HTR3AP46098 478 aa9.24□□□□□ -0.93
NEDD9-214ENST00000513989 RNF144AP50876 292 aaPredicted RBP9.24□□□□□ -0.93
NEDD9-214ENST00000513989 ZNF117Q03924 483 aa9.24□□□□□ -0.93
NEDD9-214ENST00000513989 SKP2Q13309 424 aa9.24□□□□□ -0.93
NEDD9-214ENST00000513989 CD226Q15762 336 aa9.24□□□□□ -0.93
NEDD9-214ENST00000513989 HYAL4Q2M3T9 481 aa9.24□□□□□ -0.93
NEDD9-214ENST00000513989 FNDC7Q5VTL7 733 aa9.24□□□□□ -0.93
NEDD9-214ENST00000513989 WBP2NLQ6ICG8 309 aa9.24□□□□□ -0.93
NEDD9-214ENST00000513989 CARM1Q86X55 608 aa9.24□□□□□ -0.93
NEDD9-214ENST00000513989 ZGRF1Q86YA3 2104 aa9.24□□□□□ -0.93
NEDD9-214ENST00000513989 FAM71CQ8NEG0 241 aa9.24□□□□□ -0.93
NEDD9-214ENST00000513989 DNAJA4Q8WW22 397 aaPredicted RBP9.24□□□□□ -0.93
NEDD9-214ENST00000513989 NR4A3Q92570 626 aa9.24□□□□□ -0.93
NEDD9-214ENST00000513989 NTNG2Q96CW9 530 aa9.24□□□□□ -0.93
NEDD9-214ENST00000513989 ARSGQ96EG1 525 aa9.24□□□□□ -0.93
NEDD9-214ENST00000513989 HSH2DQ96JZ2 352 aa9.24□□□□□ -0.93
NEDD9-214ENST00000513989 PSMG3-AS1Q96PY0 264 aa9.24□□□□□ -0.93
NEDD9-214ENST00000513989 ZNF347Q96SE7 839 aa9.24□□□□□ -0.93
NEDD9-214ENST00000513989 ARHGDIGQ99819 225 aa9.24□□□□□ -0.93
NEDD9-214ENST00000513989 POLR2J2Q9GZM3 115 aaKnown RBP9.24□□□□□ -0.93
NEDD9-214ENST00000513989 POLR2J3Q9H1A7 115 aaKnown RBP9.24□□□□□ -0.93
NEDD9-214ENST00000513989 MAGIXQ9H6Y5 334 aa9.24□□□□□ -0.93
NEDD9-214ENST00000513989 SERINC1Q9NRX5 453 aa9.24□□□□□ -0.93
NEDD9-214ENST00000513989 DEPPQ9NTK1 212 aa9.24□□□□□ -0.93
NEDD9-214ENST00000513989 QPCTLQ9NXS2 382 aa9.24□□□□□ -0.93
NEDD9-214ENST00000513989 DNAJB12Q9NXW2 375 aaKnown RBP9.24□□□□□ -0.93
NEDD9-214ENST00000513989 ICAM5Q9UMF0 924 aa9.24□□□□□ -0.93
NEDD9-214ENST00000513989 AURKCQ9UQB9 309 aa9.24□□□□□ -0.93
NEDD9-214ENST00000513989 C15orf41Q9Y2V0 281 aa9.24□□□□□ -0.93
NEDD9-214ENST00000513989 CENPVL1A0A0U1RR11 272 aa9.23□□□□□ -0.93
NEDD9-214ENST00000513989 DHRS12A0PJE2 317 aa9.23□□□□□ -0.93
NEDD9-214ENST00000513989 TFECO14948 347 aaPredicted RBP9.23□□□□□ -0.93
NEDD9-214ENST00000513989 GMFGO60234 142 aa9.23□□□□□ -0.93
NEDD9-214ENST00000513989 CDC40O60508 579 aaKnown RBP eCLIP9.23□□□□□ -0.93
NEDD9-214ENST00000513989 GLSO94925 669 aaPredicted RBP9.23□□□□□ -0.93
NEDD9-214ENST00000513989 FABP3P05413 133 aa9.23□□□□□ -0.93
NEDD9-214ENST00000513989 GKN3PP0CG01 181 aa9.23□□□□□ -0.93
NEDD9-214ENST00000513989 RAP2AP10114 183 aa9.23□□□□□ -0.93
NEDD9-214ENST00000513989 HK1P19367 917 aa9.23□□□□□ -0.93
NEDD9-214ENST00000513989 ATP6V1B2P21281 511 aa9.23□□□□□ -0.93
NEDD9-214ENST00000513989 FKBP2P26885 142 aaKnown RBP9.23□□□□□ -0.93
NEDD9-214ENST00000513989 GDF1P27539 372 aa9.23□□□□□ -0.93
NEDD9-214ENST00000513989 ADH6P28332 368 aa9.23□□□□□ -0.93
NEDD9-214ENST00000513989 SRD5A2P31213 254 aa9.23□□□□□ -0.93
NEDD9-214ENST00000513989 SLC1A3P43003 542 aa9.23□□□□□ -0.93
NEDD9-214ENST00000513989 OR1E2P47887 323 aa9.23□□□□□ -0.93
NEDD9-214ENST00000513989 UQCRFS1P47985 274 aa9.23□□□□□ -0.93
NEDD9-214ENST00000513989 IDH2P48735 452 aaKnown RBP9.23□□□□□ -0.93
NEDD9-214ENST00000513989 SMIM11AP58511 58 aa9.23□□□□□ -0.93
NEDD9-214ENST00000513989 TAS2R41P59536 307 aa9.23□□□□□ -0.93
NEDD9-214ENST00000513989 ACTR3P61158 418 aa9.23□□□□□ -0.93
NEDD9-214ENST00000513989 ALDH6A1Q02252 535 aaKnown RBP9.23□□□□□ -0.93
NEDD9-214ENST00000513989 FOXO1Q12778 655 aa9.23□□□□□ -0.93
NEDD9-214ENST00000513989 EPS8Q12929 822 aa9.23□□□□□ -0.93
NEDD9-214ENST00000513989 NRF1Q16656 503 aa9.23□□□□□ -0.93
NEDD9-214ENST00000513989 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.23□□□□□ -0.93
NEDD9-214ENST00000513989 SLC6A19Q695T7 634 aa9.23□□□□□ -0.93
NEDD9-214ENST00000513989 ZFP1Q6P2D0 407 aa9.23□□□□□ -0.93
NEDD9-214ENST00000513989 AAGABQ6PD74 315 aa9.23□□□□□ -0.93
NEDD9-214ENST00000513989 FAM180AQ6UWF9 173 aa9.23□□□□□ -0.93
NEDD9-214ENST00000513989 VTCN1Q7Z7D3 282 aa9.23□□□□□ -0.93
NEDD9-214ENST00000513989 LSMEM1Q8N8F7 131 aa9.23□□□□□ -0.93
NEDD9-214ENST00000513989 FADS6Q8N9I5 356 aa9.23□□□□□ -0.93
NEDD9-214ENST00000513989 OR2M3Q8NG83 312 aa9.23□□□□□ -0.93
NEDD9-214ENST00000513989 GPR32P1Q8NGA4 272 aa9.23□□□□□ -0.93
NEDD9-214ENST00000513989 OR10Q1Q8NGQ4 319 aa9.23□□□□□ -0.93
NEDD9-214ENST00000513989 VANGL1Q8TAA9 524 aaPredicted RBP9.23□□□□□ -0.93
NEDD9-214ENST00000513989 GPR119Q8TDV5 335 aa9.23□□□□□ -0.93
NEDD9-214ENST00000513989 ST8SIA1Q92185 356 aa9.23□□□□□ -0.93
NEDD9-214ENST00000513989 STMN2Q93045 179 aa9.23□□□□□ -0.93
NEDD9-214ENST00000513989 UTP4Q969X6 686 aaKnown RBP9.23□□□□□ -0.93
NEDD9-214ENST00000513989 ZBTB8AQ96BR9 441 aa9.23□□□□□ -0.93
NEDD9-214ENST00000513989 C1GALT1C1Q96EU7 318 aa9.23□□□□□ -0.93
NEDD9-214ENST00000513989 SLC47A1Q96FL8 570 aa9.23□□□□□ -0.93
NEDD9-214ENST00000513989 SEPHS2Q99611 448 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms