RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 EXOSC3Q9NQT5 275 aaKnown RBP13.74□□□□□ -0.21
VCAN-211ENST00000513984 RPS6KB2Q9UBS0 482 aa13.74□□□□□ -0.21
VCAN-211ENST00000513984 DIMT1Q9UNQ2 313 aaKnown RBP13.74□□□□□ -0.21
VCAN-211ENST00000513984 GPR52Q9Y2T5 361 aa13.74□□□□□ -0.21
VCAN-211ENST00000513984 LSM2Q9Y333 95 aaKnown RBP13.74□□□□□ -0.21
VCAN-211ENST00000513984 MUC3AQ02505 3323 aa13.74□□□□□ -0.21
VCAN-211ENST00000513984 COL27A1Q8IZC6 1860 aaPredicted RBP13.73□□□□□ -0.21
VCAN-211ENST00000513984 IRGMA1A4Y4 181 aa13.73□□□□□ -0.21
VCAN-211ENST00000513984 RCBTB2O95199 551 aa13.73□□□□□ -0.21
VCAN-211ENST00000513984 NGFRP08138 427 aa13.73□□□□□ -0.21
VCAN-211ENST00000513984 HBQ1P09105 142 aa13.73□□□□□ -0.21
VCAN-211ENST00000513984 FUT1P19526 365 aa13.73□□□□□ -0.21
VCAN-211ENST00000513984 GAS1P54826 345 aa13.73□□□□□ -0.21
VCAN-211ENST00000513984 ARMCX4Q5H9R4 360 aa13.73□□□□□ -0.21
VCAN-211ENST00000513984 CADM2Q8N3J6 435 aa13.73□□□□□ -0.21
VCAN-211ENST00000513984 ZNF441Q8N8Z8 693 aa13.73□□□□□ -0.21
VCAN-211ENST00000513984 ZBTB44Q8NCP5 570 aa13.73□□□□□ -0.21
VCAN-211ENST00000513984 C17orf47Q8NEP4 570 aa13.73□□□□□ -0.21
VCAN-211ENST00000513984 OR52L1Q8NGH7 329 aa13.73□□□□□ -0.21
VCAN-211ENST00000513984 DNAJA4Q8WW22 397 aaPredicted RBP13.73□□□□□ -0.21
VCAN-211ENST00000513984 OR5M11Q96RB7 305 aa13.73□□□□□ -0.21
VCAN-211ENST00000513984 GFM1Q96RP9 751 aaKnown RBP13.73□□□□□ -0.21
VCAN-211ENST00000513984 RACGAP1Q9H0H5 632 aa13.73□□□□□ -0.21
VCAN-211ENST00000513984 SIGLEC7Q9Y286 467 aa13.73□□□□□ -0.21
VCAN-211ENST00000513984 D6RAR5 112 aa13.72□□□□□ -0.21
VCAN-211ENST00000513984 NTN3O00634 580 aaPredicted RBP13.72□□□□□ -0.21
VCAN-211ENST00000513984 SCDO00767 359 aa13.72□□□□□ -0.21
VCAN-211ENST00000513984 BHLHE40O14503 412 aa13.72□□□□□ -0.21
VCAN-211ENST00000513984 RAB36O95755 333 aa13.72□□□□□ -0.21
VCAN-211ENST00000513984 CH25HO95992 272 aa13.72□□□□□ -0.21
VCAN-211ENST00000513984 UBL4AP11441 157 aa13.72□□□□□ -0.21
VCAN-211ENST00000513984 HPGDP15428 266 aa13.72□□□□□ -0.21
VCAN-211ENST00000513984 GRK5P34947 590 aa13.72□□□□□ -0.21
VCAN-211ENST00000513984 GPR143P51810 404 aa13.72□□□□□ -0.21
VCAN-211ENST00000513984 DCDP81605 110 aaKnown RBP13.72□□□□□ -0.21
VCAN-211ENST00000513984 RAB40BQ12829 278 aa13.72□□□□□ -0.21
VCAN-211ENST00000513984 SKP2Q13309 424 aa13.72□□□□□ -0.21
VCAN-211ENST00000513984 CD226Q15762 336 aa13.72□□□□□ -0.21
VCAN-211ENST00000513984 ZNF528Q3MIS6 628 aa13.72□□□□□ -0.21
VCAN-211ENST00000513984 KLHL22Q53GT1 634 aa13.72□□□□□ -0.21
VCAN-211ENST00000513984 AADACL4Q5VUY2 407 aa13.72□□□□□ -0.21
VCAN-211ENST00000513984 HLA-DQA1Q5Y7H0 255 aa13.72□□□□□ -0.21
VCAN-211ENST00000513984 HSDL2Q6YN16 418 aa13.72□□□□□ -0.21
VCAN-211ENST00000513984 SLC29A4Q7RTT9 530 aa13.72□□□□□ -0.21
VCAN-211ENST00000513984 LSRQ86X29 649 aaPredicted RBP13.72□□□□□ -0.21
VCAN-211ENST00000513984 PPP1R3BQ86XI6 285 aa13.72□□□□□ -0.21
VCAN-211ENST00000513984 LNX2Q8N448 690 aa13.72□□□□□ -0.21
VCAN-211ENST00000513984 OR52I1Q8NGK6 324 aa13.72□□□□□ -0.21
VCAN-211ENST00000513984 OR13C2Q8NGS9 318 aa13.72□□□□□ -0.21
VCAN-211ENST00000513984 TBC1D15Q8TC07 691 aa13.72□□□□□ -0.21
VCAN-211ENST00000513984 PLEKHA8Q96JA3 519 aa13.72□□□□□ -0.21
VCAN-211ENST00000513984 CCNL2Q96S94 520 aaPredicted RBP13.72□□□□□ -0.21
VCAN-211ENST00000513984 MND1Q9BWT6 205 aa13.72□□□□□ -0.21
VCAN-211ENST00000513984 FGF20Q9NP95 211 aaPredicted RBP13.72□□□□□ -0.21
VCAN-211ENST00000513984 ERGIC3Q9Y282 383 aa13.72□□□□□ -0.21
VCAN-211ENST00000513984 SPEGQ15772 3267 aa13.72□□□□□ -0.21
VCAN-211ENST00000513984 A0A087WUJ7 227 aa13.71□□□□□ -0.21
VCAN-211ENST00000513984 EFCAB9A8MZ26 197 aa13.71□□□□□ -0.21
VCAN-211ENST00000513984 TSPAN2O60636 221 aa13.71□□□□□ -0.21
VCAN-211ENST00000513984 HCN1O60741 890 aa13.71□□□□□ -0.21
VCAN-211ENST00000513984 PTP4A3O75365 173 aa13.71□□□□□ -0.21
VCAN-211ENST00000513984 SAGP10523 405 aaPredicted RBP13.71□□□□□ -0.21
VCAN-211ENST00000513984 BMP7P18075 431 aa13.71□□□□□ -0.21
VCAN-211ENST00000513984 RGS6P49758 472 aa13.71□□□□□ -0.21
VCAN-211ENST00000513984 MLLT10P55197 1068 aa13.71□□□□□ -0.21
VCAN-211ENST00000513984 VBP1P61758 197 aa13.71□□□□□ -0.21
VCAN-211ENST00000513984 COPZ1P61923 177 aa13.71□□□□□ -0.21
VCAN-211ENST00000513984 MED22Q15528 200 aa13.71□□□□□ -0.21
VCAN-211ENST00000513984 C3orf38Q5JPI3 329 aa13.71□□□□□ -0.21
VCAN-211ENST00000513984 SMARCD3Q6STE5 483 aa13.71□□□□□ -0.21
VCAN-211ENST00000513984 APOOLQ6UXV4 268 aa13.71□□□□□ -0.21
VCAN-211ENST00000513984 SHISA6Q6ZSJ9 500 aa13.71□□□□□ -0.21
VCAN-211ENST00000513984 BPHLQ86WA6 291 aaPredicted RBP13.71□□□□□ -0.21
VCAN-211ENST00000513984 CACTIN-AS1Q8N1I8 211 aa13.71□□□□□ -0.21
VCAN-211ENST00000513984 SLC43A2Q8N370 569 aa13.71□□□□□ -0.21
VCAN-211ENST00000513984 NANOGP1Q8N7R0 232 aa13.71□□□□□ -0.21
VCAN-211ENST00000513984 PROKR2Q8NFJ6 384 aa13.71□□□□□ -0.21
VCAN-211ENST00000513984 RPL3LQ92901 407 aaKnown RBP13.71□□□□□ -0.21
VCAN-211ENST00000513984 RFKQ969G6 155 aa13.71□□□□□ -0.21
VCAN-211ENST00000513984 C3orf49Q96BT1 292 aa13.71□□□□□ -0.21
VCAN-211ENST00000513984 LGALS12Q96DT0 336 aa13.71□□□□□ -0.21
VCAN-211ENST00000513984 RNF31Q96EP0 1072 aa13.71□□□□□ -0.21
VCAN-211ENST00000513984 HSPBAP1Q96EW2 488 aa13.71□□□□□ -0.21
VCAN-211ENST00000513984 MGLLQ99685 303 aa13.71□□□□□ -0.21
VCAN-211ENST00000513984 IL20RAQ9UHF4 553 aa13.71□□□□□ -0.21
VCAN-211ENST00000513984 ICAM5Q9UMF0 924 aa13.71□□□□□ -0.21
VCAN-211ENST00000513984 VSTM2BA6NLU5 285 aa13.71□□□□□ -0.22
VCAN-211ENST00000513984 IDSB3KWA1 339 aa13.71□□□□□ -0.22
VCAN-211ENST00000513984 ICOSLGO75144 302 aa13.71□□□□□ -0.22
VCAN-211ENST00000513984 FGF5P12034 268 aa13.71□□□□□ -0.22
VCAN-211ENST00000513984 GADD45AP24522 165 aa13.71□□□□□ -0.22
VCAN-211ENST00000513984 IL12BP29460 328 aa13.71□□□□□ -0.22
VCAN-211ENST00000513984 MTNR1AP48039 350 aa13.71□□□□□ -0.22
VCAN-211ENST00000513984 NR0B1P51843 470 aaKnown RBP13.71□□□□□ -0.22
VCAN-211ENST00000513984 PSPHP78330 225 aa13.71□□□□□ -0.22
VCAN-211ENST00000513984 TRA2AQ13595 282 aaKnown RBP eCLIP13.71□□□□□ -0.22
VCAN-211ENST00000513984 DOC2BQ14184 412 aa13.71□□□□□ -0.22
VCAN-211ENST00000513984 PHF19Q5T6S3 580 aa13.71□□□□□ -0.22
VCAN-211ENST00000513984 NXNL2Q5VZ03 156 aa13.71□□□□□ -0.22
VCAN-211ENST00000513984 C19orf48Q6RUI8 117 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms