RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 METTL17Q9H7H0 456 aaPredicted RBP9.8□□□□□ -0.84
RNF4-218ENST00000513284 COQ10BQ9H8M1 238 aa9.8□□□□□ -0.84
RNF4-218ENST00000513284 C19orf53Q9UNZ5 99 aaPredicted RBP9.8□□□□□ -0.84
RNF4-218ENST00000513284 WBP11Q9Y2W2 641 aaKnown RBP9.8□□□□□ -0.84
RNF4-218ENST00000513284 ATP23Q9Y6H3 246 aa9.8□□□□□ -0.84
RNF4-218ENST00000513284 NBEAL2Q6ZNJ1 2754 aa9.79□□□□□ -0.84
RNF4-218ENST00000513284 MYO1GB0I1T2 1018 aa9.79□□□□□ -0.84
RNF4-218ENST00000513284 ALG1L2C9J202 215 aa9.79□□□□□ -0.84
RNF4-218ENST00000513284 SLU7O95391 586 aaKnown RBP9.79□□□□□ -0.84
RNF4-218ENST00000513284 STAMBPO95630 424 aa9.79□□□□□ -0.84
RNF4-218ENST00000513284 GSTA1P08263 222 aa9.79□□□□□ -0.84
RNF4-218ENST00000513284 ABHD2P08910 425 aa9.79□□□□□ -0.84
RNF4-218ENST00000513284 ANXA4P09525 319 aaPredicted RBP9.79□□□□□ -0.84
RNF4-218ENST00000513284 TACSTD2P09758 323 aa9.79□□□□□ -0.84
RNF4-218ENST00000513284 CHN1P15882 459 aa9.79□□□□□ -0.84
RNF4-218ENST00000513284 DDCP20711 480 aa9.79□□□□□ -0.84
RNF4-218ENST00000513284 GABRA3P34903 492 aa9.79□□□□□ -0.84
RNF4-218ENST00000513284 MAP3K8P41279 467 aa9.79□□□□□ -0.84
RNF4-218ENST00000513284 RFX3P48380 749 aa9.79□□□□□ -0.84
RNF4-218ENST00000513284 NCBP2P52298 156 aaKnown RBP eCLIP9.79□□□□□ -0.845e-11■■■□□ 14.7
RNF4-218ENST00000513284 CDH15P55291 814 aa9.79□□□□□ -0.84
RNF4-218ENST00000513284 CHRNEQ04844 493 aa9.79□□□□□ -0.84
RNF4-218ENST00000513284 CARTPTQ16568 116 aa9.79□□□□□ -0.84
RNF4-218ENST00000513284 UNC50Q53HI1 259 aa9.79□□□□□ -0.84
RNF4-218ENST00000513284 AWAT1Q58HT5 328 aa9.79□□□□□ -0.84
RNF4-218ENST00000513284 PDSS1Q5T2R2 415 aa9.79□□□□□ -0.84
RNF4-218ENST00000513284 GALNT18Q6P9A2 607 aa9.79□□□□□ -0.84
RNF4-218ENST00000513284 RPS27LQ71UM5 84 aaKnown RBP9.79□□□□□ -0.84
RNF4-218ENST00000513284 LINC01356Q8N9X3 169 aa9.79□□□□□ -0.84
RNF4-218ENST00000513284 GATSQ8NAP1 163 aa9.79□□□□□ -0.84
RNF4-218ENST00000513284 CDC26Q8NHZ8 85 aa9.79□□□□□ -0.84
RNF4-218ENST00000513284 ACMSDQ8TDX5 336 aa9.79□□□□□ -0.84
RNF4-218ENST00000513284 PIK3R3Q92569 461 aa9.79□□□□□ -0.84
RNF4-218ENST00000513284 CPNE4Q96A23 557 aaPredicted RBP9.79□□□□□ -0.84
RNF4-218ENST00000513284 FBXO17Q96EF6 278 aa9.79□□□□□ -0.84
RNF4-218ENST00000513284 TMEM237Q96Q45 408 aa9.79□□□□□ -0.84
RNF4-218ENST00000513284 ZNF300Q96RE9 604 aaPredicted RBP9.79□□□□□ -0.84
RNF4-218ENST00000513284 LMF2Q9BU23 707 aaKnown RBP9.79□□□□□ -0.84
RNF4-218ENST00000513284 ACPTQ9BZG2 426 aa9.79□□□□□ -0.84
RNF4-218ENST00000513284 DDX18Q9NVP1 670 aaKnown RBP9.79□□□□□ -0.84
RNF4-218ENST00000513284 SIRT5Q9NXA8 310 aa9.79□□□□□ -0.84
RNF4-218ENST00000513284 ZNF225Q9UK10 706 aa9.79□□□□□ -0.84
RNF4-218ENST00000513284 NPIPA5A0A0B4J1W7 369 aa9.78□□□□□ -0.84
RNF4-218ENST00000513284 SERTM1A2A2V5 107 aa9.78□□□□□ -0.84
RNF4-218ENST00000513284 NPIPA7E9PJI5 369 aa9.78□□□□□ -0.84
RNF4-218ENST00000513284 M0R1B8 84 aa9.78□□□□□ -0.84
RNF4-218ENST00000513284 ZNF195O14628 629 aa9.78□□□□□ -0.84
RNF4-218ENST00000513284 RGS14O43566 566 aa9.78□□□□□ -0.84
RNF4-218ENST00000513284 RAD51DO75771 328 aa9.78□□□□□ -0.84
RNF4-218ENST00000513284 KCNH1O95259 989 aa9.78□□□□□ -0.84
RNF4-218ENST00000513284 OXSR1O95747 527 aaPredicted RBP9.78□□□□□ -0.84
RNF4-218ENST00000513284 NPIPA8P0DM63 369 aa9.78□□□□□ -0.84
RNF4-218ENST00000513284 BMP4P12644 408 aa9.78□□□□□ -0.84
RNF4-218ENST00000513284 DDX5P17844 614 aaKnown RBP9.78□□□□□ -0.84
RNF4-218ENST00000513284 GIFP27352 417 aa9.78□□□□□ -0.84
RNF4-218ENST00000513284 ARFIP2P53365 341 aa9.78□□□□□ -0.84
RNF4-218ENST00000513284 PRKAA2P54646 552 aa9.78□□□□□ -0.84
RNF4-218ENST00000513284 BTKQ06187 659 aa9.78□□□□□ -0.84
RNF4-218ENST00000513284 C2orf80Q0P641 193 aa9.78□□□□□ -0.84
RNF4-218ENST00000513284 GABRA6Q16445 453 aa9.78□□□□□ -0.84
RNF4-218ENST00000513284 TMEM176BQ3YBM2 270 aaPredicted RBP9.78□□□□□ -0.84
RNF4-218ENST00000513284 ARL13AQ5H913 290 aaPredicted RBP9.78□□□□□ -0.84
RNF4-218ENST00000513284 TCHHL1Q5QJ38 904 aaPredicted RBP9.78□□□□□ -0.84
RNF4-218ENST00000513284 RINLQ6ZS11 566 aa9.78□□□□□ -0.84
RNF4-218ENST00000513284 TRMT10CQ7L0Y3 403 aaKnown RBP9.78□□□□□ -0.84
RNF4-218ENST00000513284 SSX8Q7RTT4 187 aa9.78□□□□□ -0.84
RNF4-218ENST00000513284 FAM76AQ8TAV0 307 aa9.78□□□□□ -0.84
RNF4-218ENST00000513284 L3HYPDHQ96EM0 354 aa9.78□□□□□ -0.84
RNF4-218ENST00000513284 APIPQ96GX9 242 aa9.78□□□□□ -0.84
RNF4-218ENST00000513284 SH3YL1Q96HL8 342 aaPredicted RBP9.78□□□□□ -0.84
RNF4-218ENST00000513284 REXO5Q96IC2 774 aaKnown RBP9.78□□□□□ -0.84
RNF4-218ENST00000513284 MUS81Q96NY9 551 aa9.78□□□□□ -0.84
RNF4-218ENST00000513284 ZNF747Q9BV97 191 aa9.78□□□□□ -0.84
RNF4-218ENST00000513284 EBPLQ9BY08 206 aa9.78□□□□□ -0.84
RNF4-218ENST00000513284 ANKZF1Q9H8Y5 726 aa9.78□□□□□ -0.84
RNF4-218ENST00000513284 TIGARQ9NQ88 270 aa9.78□□□□□ -0.84
RNF4-218ENST00000513284 RRAGDQ9NQL2 400 aaPredicted RBP9.78□□□□□ -0.84
RNF4-218ENST00000513284 TMEM216Q9P0N5 145 aa9.78□□□□□ -0.84
RNF4-218ENST00000513284 NTMQ9P121 344 aa9.78□□□□□ -0.84
RNF4-218ENST00000513284 PCDHGB1Q9Y5G3 927 aa9.78□□□□□ -0.84
RNF4-218ENST00000513284 OIP5O43482 229 aa9.77□□□□□ -0.85
RNF4-218ENST00000513284 IGHV3-9P01782 118 aa9.77□□□□□ -0.85
RNF4-218ENST00000513284 JUNP05412 331 aaKnown RBP9.77□□□□□ -0.85
RNF4-218ENST00000513284 IFI6P09912 130 aa9.77□□□□□ -0.85
RNF4-218ENST00000513284 SBK3P0C264 359 aa9.77□□□□□ -0.85
RNF4-218ENST00000513284 ME2P23368 584 aa9.77□□□□□ -0.85
RNF4-218ENST00000513284 PRIM2P49643 509 aa9.77□□□□□ -0.85
RNF4-218ENST00000513284 DVL1P1P54792 670 aaPredicted RBP9.77□□□□□ -0.85
RNF4-218ENST00000513284 PHC1P78364 1004 aa9.77□□□□□ -0.85
RNF4-218ENST00000513284 SLC25A3Q00325 362 aa9.77□□□□□ -0.85
RNF4-218ENST00000513284 RASGEF1BQ0VAM2 473 aa9.77□□□□□ -0.85
RNF4-218ENST00000513284 FOXF1Q12946 379 aa9.77□□□□□ -0.85
RNF4-218ENST00000513284 TRIP10Q15642 601 aa9.77□□□□□ -0.85
RNF4-218ENST00000513284 CD226Q15762 336 aa9.77□□□□□ -0.85
RNF4-218ENST00000513284 VPS26BQ4G0F5 336 aa9.77□□□□□ -0.85
RNF4-218ENST00000513284 KLHL17Q6TDP4 642 aa9.77□□□□□ -0.85
RNF4-218ENST00000513284 TMEM107Q6UX40 140 aa9.77□□□□□ -0.85
RNF4-218ENST00000513284 IKBIPQ70UQ0 350 aa9.77□□□□□ -0.85
RNF4-218ENST00000513284 OR2L13Q8N349 312 aa9.77□□□□□ -0.85
RNF4-218ENST00000513284 SLC43A2Q8N370 569 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms