RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 REG4Q9BYZ8 158 aa11.18□□□□□ -0.62
VEGFA-216ENST00000512683 ATAD3AQ9NVI7 634 aa11.18□□□□□ -0.62
VEGFA-216ENST00000512683 FAIMQ9NVQ4 179 aa11.18□□□□□ -0.62
VEGFA-216ENST00000512683 KLHL9Q9P2J3 617 aa11.18□□□□□ -0.62
VEGFA-216ENST00000512683 ICAM5Q9UMF0 924 aa11.18□□□□□ -0.62
VEGFA-216ENST00000512683 DUXAA6NLW8 204 aa11.17□□□□□ -0.62
VEGFA-216ENST00000512683 ZNF724A8MTY0 619 aa11.17□□□□□ -0.62
VEGFA-216ENST00000512683 ITM2AO43736 263 aa11.17□□□□□ -0.62
VEGFA-216ENST00000512683 GMFGO60234 142 aa11.17□□□□□ -0.62
VEGFA-216ENST00000512683 SKAP2O75563 359 aaPredicted RBP11.17□□□□□ -0.62
VEGFA-216ENST00000512683 HMGN2P05204 90 aaKnown RBP11.17□□□□□ -0.62
VEGFA-216ENST00000512683 SELENBP1Q13228 472 aa11.17□□□□□ -0.62
VEGFA-216ENST00000512683 TAB1Q15750 504 aa11.17□□□□□ -0.62
VEGFA-216ENST00000512683 KRT71Q3SY84 523 aa11.17□□□□□ -0.62
VEGFA-216ENST00000512683 TMEM176BQ3YBM2 270 aaPredicted RBP11.17□□□□□ -0.62
VEGFA-216ENST00000512683 ATP6AP1LQ52LC2 224 aa11.17□□□□□ -0.62
VEGFA-216ENST00000512683 IL23RQ5VWK5 629 aa11.17□□□□□ -0.62
VEGFA-216ENST00000512683 NUDCD3Q8IVD9 361 aa11.17□□□□□ -0.62
VEGFA-216ENST00000512683 TUSC5Q8IXB3 177 aa11.17□□□□□ -0.62
VEGFA-216ENST00000512683 KRTCAP2Q8N6L1 136 aa11.17□□□□□ -0.62
VEGFA-216ENST00000512683 OR56A1Q8NGH5 318 aa11.17□□□□□ -0.62
VEGFA-216ENST00000512683 PHOSPHO1Q8TCT1 267 aa11.17□□□□□ -0.62
VEGFA-216ENST00000512683 GPR119Q8TDV5 335 aa11.17□□□□□ -0.62
VEGFA-216ENST00000512683 ADAMTS15Q8TE58 950 aa11.17□□□□□ -0.62
VEGFA-216ENST00000512683 COQ8BQ96D53 544 aa11.17□□□□□ -0.62
VEGFA-216ENST00000512683 MUCL1Q96DR8 90 aa11.17□□□□□ -0.62
VEGFA-216ENST00000512683 FAM120BQ96EK7 910 aaKnown RBP11.17□□□□□ -0.62
VEGFA-216ENST00000512683 OTUB1Q96FW1 271 aaPredicted RBP11.17□□□□□ -0.62
VEGFA-216ENST00000512683 SH3YL1Q96HL8 342 aaPredicted RBP11.17□□□□□ -0.62
VEGFA-216ENST00000512683 PKNOX2Q96KN3 472 aa11.17□□□□□ -0.62
VEGFA-216ENST00000512683 ACTRT3Q9BYD9 372 aa11.17□□□□□ -0.62
VEGFA-216ENST00000512683 C20orf27Q9GZN8 174 aa11.17□□□□□ -0.62
VEGFA-216ENST00000512683 ZCCHC3Q9NUD5 404 aaKnown RBP11.17□□□□□ -0.62
VEGFA-216ENST00000512683 FAF1Q9UNN5 650 aaPredicted RBP11.17□□□□□ -0.62
VEGFA-216ENST00000512683 USF3Q68DE3 2245 aa11.16□□□□□ -0.62
VEGFA-216ENST00000512683 GTPBP1O00178 669 aaKnown RBP11.16□□□□□ -0.62
VEGFA-216ENST00000512683 EFNA2O43921 213 aa11.16□□□□□ -0.62
VEGFA-216ENST00000512683 DNAJA2O60884 412 aa11.16□□□□□ -0.62
VEGFA-216ENST00000512683 NTN1O95631 604 aa11.16□□□□□ -0.62
VEGFA-216ENST00000512683 AK1P00568 194 aa11.16□□□□□ -0.62
VEGFA-216ENST00000512683 ADAP00813 363 aa11.16□□□□□ -0.62
VEGFA-216ENST00000512683 OPN1LWP04000 364 aa11.16□□□□□ -0.62
VEGFA-216ENST00000512683 GUSBP08236 651 aa11.16□□□□□ -0.62
VEGFA-216ENST00000512683 SOD3P08294 240 aa11.16□□□□□ -0.62
VEGFA-216ENST00000512683 DHRS4L1P0CG22 281 aa11.16□□□□□ -0.62
VEGFA-216ENST00000512683 HPCAL1P37235 193 aa11.16□□□□□ -0.62
VEGFA-216ENST00000512683 CCT3P49368 545 aaKnown RBP11.16□□□□□ -0.62
VEGFA-216ENST00000512683 DSCR9P59020 149 aa11.16□□□□□ -0.62
VEGFA-216ENST00000512683 TP53BP2Q13625 1128 aa11.16□□□□□ -0.62
VEGFA-216ENST00000512683 VEZF1Q14119 521 aa11.16□□□□□ -0.62
VEGFA-216ENST00000512683 MPP2Q14168 576 aa11.16□□□□□ -0.62
VEGFA-216ENST00000512683 PDK3Q15120 406 aa11.16□□□□□ -0.62
VEGFA-216ENST00000512683 CD226Q15762 336 aa11.16□□□□□ -0.62
VEGFA-216ENST00000512683 NRF1Q16656 503 aa11.16□□□□□ -0.62
VEGFA-216ENST00000512683 TNFAIP8L3Q5GJ75 292 aa11.16□□□□□ -0.62
VEGFA-216ENST00000512683 TIMM23BQ5SRD1 257 aa11.16□□□□□ -0.62
VEGFA-216ENST00000512683 CCNJQ5T5M9 372 aa11.16□□□□□ -0.62
VEGFA-216ENST00000512683 AP1ARQ63HQ0 302 aa11.16□□□□□ -0.62
VEGFA-216ENST00000512683 DNM1P46Q6ZS02 220 aa11.16□□□□□ -0.62
VEGFA-216ENST00000512683 NUFIP2Q7Z417 695 aaKnown RBP11.16□□□□□ -0.62
VEGFA-216ENST00000512683 SZRD1Q7Z422 152 aa11.16□□□□□ -0.62
VEGFA-216ENST00000512683 HIPK1Q86Z02 1210 aa11.16□□□□□ -0.62
VEGFA-216ENST00000512683 GATSQ8NAP1 163 aa11.16□□□□□ -0.62
VEGFA-216ENST00000512683 FNDC5Q8NAU1 212 aa11.16□□□□□ -0.62
VEGFA-216ENST00000512683 OR5W2Q8NH69 310 aa11.16□□□□□ -0.62
VEGFA-216ENST00000512683 FBXO27Q8NI29 283 aa11.16□□□□□ -0.62
VEGFA-216ENST00000512683 RAB3IL1Q8TBN0 382 aa11.16□□□□□ -0.62
VEGFA-216ENST00000512683 ABHD3Q8WU67 409 aa11.16□□□□□ -0.62
VEGFA-216ENST00000512683 JADE3Q92613 823 aa11.16□□□□□ -0.62
VEGFA-216ENST00000512683 NPAS1Q99742 590 aa11.16□□□□□ -0.62
VEGFA-216ENST00000512683 KLHDC3Q9BQ90 382 aa11.16□□□□□ -0.62
VEGFA-216ENST00000512683 ALG2Q9H553 416 aa11.16□□□□□ -0.62
VEGFA-216ENST00000512683 C12orf49Q9H741 205 aa11.16□□□□□ -0.62
VEGFA-216ENST00000512683 TMEM185BQ9H7F4 350 aa11.16□□□□□ -0.62
VEGFA-216ENST00000512683 CXorf36Q9H7Y0 433 aa11.16□□□□□ -0.62
VEGFA-216ENST00000512683 SERINC1Q9NRX5 453 aa11.16□□□□□ -0.62
VEGFA-216ENST00000512683 PRDM4Q9UKN5 801 aa11.16□□□□□ -0.62
VEGFA-216ENST00000512683 RAB21Q9UL25 225 aa11.16□□□□□ -0.62
VEGFA-216ENST00000512683 MGAT4BQ9UQ53 548 aa11.16□□□□□ -0.62
VEGFA-216ENST00000512683 LIPT1Q9Y234 373 aa11.16□□□□□ -0.62
VEGFA-216ENST00000512683 DTNAQ9Y4J8 743 aa11.16□□□□□ -0.62
VEGFA-216ENST00000512683 GOLGA8QA0A0J9YX86 632 aa11.15□□□□□ -0.62
VEGFA-216ENST00000512683 A0A1W2PP18 115 aa11.15□□□□□ -0.62
VEGFA-216ENST00000512683 WDR91A4D1P6 747 aa11.15□□□□□ -0.62
VEGFA-216ENST00000512683 GOLGA8OA6NCC3 632 aa11.15□□□□□ -0.62
VEGFA-216ENST00000512683 ZNF814B7Z6K7 855 aa11.15□□□□□ -0.62
VEGFA-216ENST00000512683 RNF223E7ERA6 249 aa11.15□□□□□ -0.62
VEGFA-216ENST00000512683 NPIPB9F8W1W9 429 aa11.15□□□□□ -0.62
VEGFA-216ENST00000512683 GOLGA8NF8WBI6 632 aa11.15□□□□□ -0.62
VEGFA-216ENST00000512683 BIRC5O15392 142 aa11.15□□□□□ -0.62
VEGFA-216ENST00000512683 RGS16O15492 202 aaPredicted RBP11.15□□□□□ -0.62
VEGFA-216ENST00000512683 CLOCKO15516 846 aa11.15□□□□□ -0.62
VEGFA-216ENST00000512683 CD5LO43866 347 aa11.15□□□□□ -0.62
VEGFA-216ENST00000512683 PGM3O95394 542 aa11.15□□□□□ -0.62
VEGFA-216ENST00000512683 NUDT14O95848 222 aa11.15□□□□□ -0.62
VEGFA-216ENST00000512683 G6PDP11413 515 aa11.15□□□□□ -0.62
VEGFA-216ENST00000512683 PRKCAP17252 672 aa11.15□□□□□ -0.62
VEGFA-216ENST00000512683 PRPS1L1P21108 318 aa11.15□□□□□ -0.62
VEGFA-216ENST00000512683 SLC7A1P30825 629 aa11.15□□□□□ -0.62
VEGFA-216ENST00000512683 SFTPDP35247 375 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms